RNA–Protein interactions for RNA: ENST00000450844.1

GPATCH3-203, Transcript of G-patch domain containing 3, humanhuman

TSL 2

Gene GPATCH3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH3-203ENST00000450844 ARHGAP27Q6ZUM4 889 aa23.31■■□□□ 1.32
GPATCH3-203ENST00000450844 ZBTB1Q9Y2K1 713 aa23.31■■□□□ 1.32
GPATCH3-203ENST00000450844 COL15A1P39059 1388 aa23.3■■□□□ 1.32
GPATCH3-203ENST00000450844 SBF1O95248 1867 aa23.3■■□□□ 1.32
GPATCH3-203ENST00000450844 CHRNA5P30532 468 aa23.29■■□□□ 1.32
GPATCH3-203ENST00000450844 BCL2L12Q9HB09 334 aa23.29■■□□□ 1.32
GPATCH3-203ENST00000450844 PIM2Q9P1W9 311 aa23.28■■□□□ 1.32
GPATCH3-203ENST00000450844 SCN7AQ01118 1682 aa23.27■■□□□ 1.32
GPATCH3-203ENST00000450844 NFIXQ14938 502 aa23.26■■□□□ 1.31
GPATCH3-203ENST00000450844 VSIG10Q8N0Z9 540 aa23.26■■□□□ 1.31
GPATCH3-203ENST00000450844 NARFQ9UHQ1 456 aa23.26■■□□□ 1.31
GPATCH3-203ENST00000450844 ZPR1O75312 459 aa23.25■■□□□ 1.31
GPATCH3-203ENST00000450844 DALRD3Q5D0E6 543 aaKnown RBP23.25■■□□□ 1.31
GPATCH3-203ENST00000450844 NMRK2Q9NPI5 230 aa23.25■■□□□ 1.31
GPATCH3-203ENST00000450844 CNGB1Q14028 1251 aaPredicted RBP23.24■■□□□ 1.31
GPATCH3-203ENST00000450844 C9orf131Q5VYM1 1079 aa23.24■■□□□ 1.31
GPATCH3-203ENST00000450844 IL17REQ8NFR9 667 aa23.24■■□□□ 1.31
GPATCH3-203ENST00000450844 CARMIL3Q8ND23 1372 aa23.24■■□□□ 1.31
GPATCH3-203ENST00000450844 ANKRD31Q8N7Z5 1873 aa23.24■■□□□ 1.31
GPATCH3-203ENST00000450844 U2SURPO15042 1029 aaKnown RBP23.21■■□□□ 1.31
GPATCH3-203ENST00000450844 ZNF496Q96IT1 587 aaPredicted RBP23.21■■□□□ 1.31
GPATCH3-203ENST00000450844 COL11A2P13942 1736 aaPredicted RBP23.21■■□□□ 1.31
GPATCH3-203ENST00000450844 CEMIPQ8WUJ3 1361 aa23.2■■□□□ 1.3
GPATCH3-203ENST00000450844 CANXP27824 592 aaKnown RBP23.2■■□□□ 1.3
GPATCH3-203ENST00000450844 TNRC6CQ9HCJ0 1690 aaKnown RBP23.19■■□□□ 1.3
GPATCH3-203ENST00000450844 HEG1Q9ULI3 1381 aa23.19■■□□□ 1.3
GPATCH3-203ENST00000450844 TOMM70O94826 608 aa23.19■■□□□ 1.3
GPATCH3-203ENST00000450844 EIF5P55010 431 aaKnown RBP23.19■■□□□ 1.3
GPATCH3-203ENST00000450844 GNAT3A8MTJ3 354 aa23.18■■□□□ 1.3
GPATCH3-203ENST00000450844 SERPINB2P05120 415 aa23.18■■□□□ 1.3
GPATCH3-203ENST00000450844 ZNF790Q6PG37 636 aa23.18■■□□□ 1.3
GPATCH3-203ENST00000450844 PHACTR3Q96KR7 559 aa23.18■■□□□ 1.3
GPATCH3-203ENST00000450844 BCORQ6W2J9 1755 aa23.18■■□□□ 1.3
GPATCH3-203ENST00000450844 TIAM2Q8IVF5 1701 aa23.17■■□□□ 1.3
GPATCH3-203ENST00000450844 PRELPP51888 382 aa23.17■■□□□ 1.3
GPATCH3-203ENST00000450844 TTC5Q8N0Z6 440 aa23.17■■□□□ 1.3
GPATCH3-203ENST00000450844 GAS2L2Q8NHY3 880 aa23.17■■□□□ 1.3
GPATCH3-203ENST00000450844 RNF181Q9P0P0 153 aa23.17■■□□□ 1.3
GPATCH3-203ENST00000450844 WDR90Q96KV7 1748 aa23.16■■□□□ 1.3
GPATCH3-203ENST00000450844 RSPH6AQ9H0K4 717 aa23.16■■□□□ 1.3
GPATCH3-203ENST00000450844 CCDC88AQ3V6T2 1871 aa23.15■■□□□ 1.3
GPATCH3-203ENST00000450844 RASSF7Q02833 373 aa23.15■■□□□ 1.3
GPATCH3-203ENST00000450844 TEFQ10587 303 aa23.15■■□□□ 1.3
GPATCH3-203ENST00000450844 KCNQ3O43525 872 aa23.14■■□□□ 1.29
GPATCH3-203ENST00000450844 STARD3NLO95772 234 aa23.14■■□□□ 1.29
GPATCH3-203ENST00000450844 PRKAR2BP31323 418 aa23.14■■□□□ 1.29
GPATCH3-203ENST00000450844 TBC1D9BQ66K14 1250 aa23.13■■□□□ 1.29
GPATCH3-203ENST00000450844 BICDL1Q6ZP65 573 aa23.13■■□□□ 1.29
GPATCH3-203ENST00000450844 C2CD5Q86YS7 1000 aa23.11■■□□□ 1.29
GPATCH3-203ENST00000450844 RBM46Q8TBY0 533 aaKnown RBP23.11■■□□□ 1.29
GPATCH3-203ENST00000450844 A0A087WZG4 1122 aa23.1■■□□□ 1.29
GPATCH3-203ENST00000450844 A1BGP04217 495 aa23.1■■□□□ 1.29
GPATCH3-203ENST00000450844 APLP1P51693 650 aa23.1■■□□□ 1.29
GPATCH3-203ENST00000450844 TBC1D2BQ9UPU7 963 aa23.1■■□□□ 1.29
GPATCH3-203ENST00000450844 IL6STP40189 918 aaPredicted RBP23.09■■□□□ 1.29
GPATCH3-203ENST00000450844 DNAJC5GQ8N7S2 189 aa23.09■■□□□ 1.29
GPATCH3-203ENST00000450844 FMNL2Q96PY5 1086 aa23.09■■□□□ 1.29
GPATCH3-203ENST00000450844 CACNA1SQ13698 1873 aa23.09■■□□□ 1.29
GPATCH3-203ENST00000450844 FER1L6Q2WGJ9 1857 aa23.09■■□□□ 1.29
GPATCH3-203ENST00000450844 KDM2BQ8NHM5 1336 aa23.08■■□□□ 1.29
GPATCH3-203ENST00000450844 NFKBIEO00221 500 aa23.08■■□□□ 1.29
GPATCH3-203ENST00000450844 PPP2R1AP30153 589 aa23.08■■□□□ 1.29
GPATCH3-203ENST00000450844 ZEB1P37275 1124 aaPredicted RBP23.08■■□□□ 1.29
GPATCH3-203ENST00000450844 PRR5LQ6MZQ0 368 aa23.08■■□□□ 1.29
GPATCH3-203ENST00000450844 TTLL6Q8N841 843 aa23.08■■□□□ 1.29
GPATCH3-203ENST00000450844 TEX13AQ9BXU3 409 aaPredicted RBP23.08■■□□□ 1.29
GPATCH3-203ENST00000450844 ZNF330Q9Y3S2 320 aaPredicted RBP23.08■■□□□ 1.29
GPATCH3-203ENST00000450844 ARFGEF2Q9Y6D5 1785 aa23.08■■□□□ 1.29
GPATCH3-203ENST00000450844 PRAMEF22A3QJZ6 481 aa23.07■■□□□ 1.28
GPATCH3-203ENST00000450844 CAMTA2O94983 1202 aa23.07■■□□□ 1.28
GPATCH3-203ENST00000450844 IFFO2Q5TF58 517 aa23.07■■□□□ 1.28
GPATCH3-203ENST00000450844 CCDC24Q8N4L8 307 aa23.07■■□□□ 1.28
GPATCH3-203ENST00000450844 RRAGCQ9HB90 399 aa23.07■■□□□ 1.28
GPATCH3-203ENST00000450844 DICER1Q9UPY3 1922 aaKnown RBP23.06■■□□□ 1.28
GPATCH3-203ENST00000450844 BTBD11A6QL63 1104 aa23.06■■□□□ 1.28
GPATCH3-203ENST00000450844 CFAP53Q96M91 514 aa23.06■■□□□ 1.28
GPATCH3-203ENST00000450844 ZC3H4Q9UPT8 1303 aaKnown RBP23.06■■□□□ 1.28
GPATCH3-203ENST00000450844 H0YIN7 160 aa23.05■■□□□ 1.28
GPATCH3-203ENST00000450844 LMNB1P20700 586 aa23.05■■□□□ 1.28
GPATCH3-203ENST00000450844 PIP4K2AP48426 406 aaPredicted RBP23.05■■□□□ 1.28
GPATCH3-203ENST00000450844 SLX4Q8IY92 1834 aa23.05■■□□□ 1.28
GPATCH3-203ENST00000450844 DLG5Q8TDM6 1919 aa23.04■■□□□ 1.28
GPATCH3-203ENST00000450844 HTRA3P83110 453 aa23.04■■□□□ 1.28
GPATCH3-203ENST00000450844 MCM10Q7L590 875 aa23.04■■□□□ 1.28
GPATCH3-203ENST00000450844 USP16Q9Y5T5 823 aa23.04■■□□□ 1.28
GPATCH3-203ENST00000450844 BRIP1Q9BX63 1249 aa23.03■■□□□ 1.28
GPATCH3-203ENST00000450844 LAMB4A4D0S4 1761 aa23.03■■□□□ 1.28
GPATCH3-203ENST00000450844 U2AF1L5P0DN76 240 aaPredicted RBP23.02■■□□□ 1.28
GPATCH3-203ENST00000450844 U2AF1Q01081 240 aaKnown RBP eCLIP23.02■■□□□ 1.28
GPATCH3-203ENST00000450844 FSTL1Q12841 308 aa23.02■■□□□ 1.28
GPATCH3-203ENST00000450844 KDM3BQ7LBC6 1761 aa23.01■■□□□ 1.27
GPATCH3-203ENST00000450844 DCTN1Q14203 1278 aa23.01■■□□□ 1.27
GPATCH3-203ENST00000450844 C16orf71Q8IYS4 520 aaPredicted RBP23.01■■□□□ 1.27
GPATCH3-203ENST00000450844 DZIP3Q86Y13 1208 aaKnown RBP23■■□□□ 1.27
GPATCH3-203ENST00000450844 NUDCQ9Y266 331 aa23■■□□□ 1.27
GPATCH3-203ENST00000450844 GLTPD2A6NH11 291 aa22.99■■□□□ 1.27
GPATCH3-203ENST00000450844 C21orf2O43822 256 aa22.99■■□□□ 1.27
GPATCH3-203ENST00000450844 PDE6BP35913 854 aa22.99■■□□□ 1.27
GPATCH3-203ENST00000450844 ZNF622Q969S3 477 aaKnown RBP eCLIP22.99■■□□□ 1.27
GPATCH3-203ENST00000450844 NBPF26B4DH59 902 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms