RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 GIGYF1O75420 1035 aaPredicted RBP29.19■■■□□ 2.26
CPSF7-208ENST00000450000 ZNF330Q9Y3S2 320 aaPredicted RBP29.19■■■□□ 2.26
CPSF7-208ENST00000450000 C10orf71Q711Q0 1435 aa29.19■■■□□ 2.26
CPSF7-208ENST00000450000 DPEP1P16444 411 aa29.18■■■□□ 2.26
CPSF7-208ENST00000450000 HEG1Q9ULI3 1381 aa29.17■■■□□ 2.26
CPSF7-208ENST00000450000 ADAMTS7Q9UKP4 1686 aa29.17■■■□□ 2.26
CPSF7-208ENST00000450000 PXDNLA1KZ92 1463 aa29.17■■■□□ 2.26
CPSF7-208ENST00000450000 C4AP0C0L4 1744 aa29.16■■■□□ 2.26
CPSF7-208ENST00000450000 DDR1Q08345 913 aa29.15■■■□□ 2.26
CPSF7-208ENST00000450000 MCM10Q7L590 875 aa29.15■■■□□ 2.26
CPSF7-208ENST00000450000 PNNQ9H307 717 aaKnown RBP29.15■■■□□ 2.26
CPSF7-208ENST00000450000 CEMIPQ8WUJ3 1361 aa29.14■■■□□ 2.26
CPSF7-208ENST00000450000 PIM2Q9P1W9 311 aa29.14■■■□□ 2.26
CPSF7-208ENST00000450000 POLRMTO00411 1230 aaKnown RBP29.13■■■□□ 2.25
CPSF7-208ENST00000450000 HTATSF1O43719 755 aaKnown RBP29.13■■■□□ 2.25
CPSF7-208ENST00000450000 TM4SF1P30408 202 aa29.13■■■□□ 2.25
CPSF7-208ENST00000450000 ARHGAP27Q6ZUM4 889 aa29.13■■■□□ 2.25
CPSF7-208ENST00000450000 GPBP1L1Q9HC44 474 aaPredicted RBP29.12■■■□□ 2.25
CPSF7-208ENST00000450000 VIRMAQ69YN4 1812 aaKnown RBP29.11■■■□□ 2.25
CPSF7-208ENST00000450000 C1QTNF8P60827 252 aa29.11■■■□□ 2.25
CPSF7-208ENST00000450000 ATP10DQ9P241 1426 aa29.11■■■□□ 2.25
CPSF7-208ENST00000450000 EIF5P55010 431 aaKnown RBP29.1■■■□□ 2.25
CPSF7-208ENST00000450000 NFIXQ14938 502 aa29.1■■■□□ 2.25
CPSF7-208ENST00000450000 DCTN1Q14203 1278 aa29.09■■■□□ 2.25
CPSF7-208ENST00000450000 DALRD3Q5D0E6 543 aaKnown RBP29.09■■■□□ 2.25
CPSF7-208ENST00000450000 BICDL1Q6ZP65 573 aa29.09■■■□□ 2.25
CPSF7-208ENST00000450000 ZNF526Q8TF50 670 aaPredicted RBP29.09■■■□□ 2.25
CPSF7-208ENST00000450000 MAPK8IP3Q9UPT6 1336 aa29.09■■■□□ 2.25
CPSF7-208ENST00000450000 KCNQ3O43525 872 aa29.08■■■□□ 2.25
CPSF7-208ENST00000450000 IL6STP40189 918 aaPredicted RBP29.08■■■□□ 2.25
CPSF7-208ENST00000450000 RALBP1Q15311 655 aa29.08■■■□□ 2.25
CPSF7-208ENST00000450000 SERPINB2P05120 415 aa29.07■■■□□ 2.24
CPSF7-208ENST00000450000 GOLGB1Q14789 3259 aaKnown RBP29.06■■■□□ 2.24
CPSF7-208ENST00000450000 NPHP1O15259 732 aa29.06■■■□□ 2.24
CPSF7-208ENST00000450000 A1BGP04217 495 aa29.06■■■□□ 2.24
CPSF7-208ENST00000450000 SNRPA1P09661 255 aaKnown RBP29.06■■■□□ 2.24
CPSF7-208ENST00000450000 DDX10Q13206 875 aaKnown RBP29.06■■■□□ 2.24
CPSF7-208ENST00000450000 TAF7Q15545 349 aaPredicted RBP29.06■■■□□ 2.24
CPSF7-208ENST00000450000 TBC1D2BQ9UPU7 963 aa29.06■■■□□ 2.24
CPSF7-208ENST00000450000 CHRNA5P30532 468 aa29.05■■■□□ 2.24
CPSF7-208ENST00000450000 UBR2Q8IWV8 1755 aa29.05■■■□□ 2.24
CPSF7-208ENST00000450000 KIF13BQ9NQT8 1826 aa29.04■■■□□ 2.24
CPSF7-208ENST00000450000 BCL2L12Q9HB09 334 aa29.04■■■□□ 2.24
CPSF7-208ENST00000450000 SENP3-EIF4A1A0A087X0R7 540 aa29.03■■■□□ 2.24
CPSF7-208ENST00000450000 N4BP2Q86UW6 1770 aaPredicted RBP29.03■■■□□ 2.24
CPSF7-208ENST00000450000 KCNA3P22001 575 aa29.02■■■□□ 2.24
CPSF7-208ENST00000450000 PNISRQ8TF01 805 aaKnown RBP29.02■■■□□ 2.24
CPSF7-208ENST00000450000 USP16Q9Y5T5 823 aa29.02■■■□□ 2.24
CPSF7-208ENST00000450000 NFE2L2Q16236 605 aa29■■■□□ 2.23
CPSF7-208ENST00000450000 DZIP3Q86Y13 1208 aaKnown RBP29■■■□□ 2.23
CPSF7-208ENST00000450000 TBC1D9BQ66K14 1250 aa28.99■■■□□ 2.23
CPSF7-208ENST00000450000 SETDB2Q96T68 719 aa28.99■■■□□ 2.23
CPSF7-208ENST00000450000 H0YIN7 160 aa28.98■■■□□ 2.23
CPSF7-208ENST00000450000 ADCY9O60503 1353 aa28.98■■■□□ 2.23
CPSF7-208ENST00000450000 SIPA1L3O60292 1781 aaPredicted RBP28.98■■■□□ 2.23
CPSF7-208ENST00000450000 C2CD5Q86YS7 1000 aa28.97■■■□□ 2.23
CPSF7-208ENST00000450000 MIS18AQ9NYP9 233 aa28.97■■■□□ 2.23
CPSF7-208ENST00000450000 PRAMEF22A3QJZ6 481 aa28.96■■■□□ 2.23
CPSF7-208ENST00000450000 PIP4K2AP48426 406 aaPredicted RBP28.96■■■□□ 2.23
CPSF7-208ENST00000450000 PLEKHF1Q96S99 279 aa28.96■■■□□ 2.23
CPSF7-208ENST00000450000 ZNF652Q9Y2D9 606 aa28.96■■■□□ 2.23
CPSF7-208ENST00000450000 CARMIL3Q8ND23 1372 aa28.95■■■□□ 2.22
CPSF7-208ENST00000450000 KIAA1551Q9HCM1 1747 aa28.94■■■□□ 2.22
CPSF7-208ENST00000450000 CAMTA2O94983 1202 aa28.93■■■□□ 2.22
CPSF7-208ENST00000450000 PDE6BP35913 854 aa28.93■■■□□ 2.22
CPSF7-208ENST00000450000 C9orf131Q5VYM1 1079 aa28.93■■■□□ 2.22
CPSF7-208ENST00000450000 TTLL6Q8N841 843 aa28.93■■■□□ 2.22
CPSF7-208ENST00000450000 PDZRN3Q9UPQ7 1066 aa28.93■■■□□ 2.22
CPSF7-208ENST00000450000 MYBBP1AQ9BQG0 1328 aaKnown RBP28.93■■■□□ 2.22
CPSF7-208ENST00000450000 ST5P78524 1137 aa28.92■■■□□ 2.22
CPSF7-208ENST00000450000 CNBD1Q8NA66 436 aa28.92■■■□□ 2.22
CPSF7-208ENST00000450000 ZNF622Q969S3 477 aaKnown RBP eCLIP28.91■■■□□ 2.222e-6■□□□□ 9.3
CPSF7-208ENST00000450000 BRIP1Q9BX63 1249 aa28.9■■■□□ 2.22
CPSF7-208ENST00000450000 RIPK4P57078 832 aa28.89■■■□□ 2.22
CPSF7-208ENST00000450000 WDR43Q15061 677 aaKnown RBP eCLIP28.89■■■□□ 2.22
CPSF7-208ENST00000450000 PRR5LQ6MZQ0 368 aa28.89■■■□□ 2.22
CPSF7-208ENST00000450000 CLEC4GQ6UXB4 293 aa28.89■■■□□ 2.22
CPSF7-208ENST00000450000 THUMPD2Q9BTF0 503 aaKnown RBP28.89■■■□□ 2.22
CPSF7-208ENST00000450000 RNF181Q9P0P0 153 aa28.89■■■□□ 2.22
CPSF7-208ENST00000450000 LMOD3Q0VAK6 560 aa28.88■■■□□ 2.21
CPSF7-208ENST00000450000 NBPF5PQ86XG9 351 aaPredicted RBP28.87■■■□□ 2.21
CPSF7-208ENST00000450000 CCDC24Q8N4L8 307 aa28.87■■■□□ 2.21
CPSF7-208ENST00000450000 NGEFQ8N5V2 710 aa28.86■■■□□ 2.21
CPSF7-208ENST00000450000 TSPYL4Q9UJ04 414 aa28.85■■■□□ 2.21
CPSF7-208ENST00000450000 NBPF26B4DH59 902 aa28.84■■■□□ 2.21
CPSF7-208ENST00000450000 EIF4A1P60842 406 aaKnown RBP28.84■■■□□ 2.21
CPSF7-208ENST00000450000 NBPF10Q6P3W6 841 aaKnown RBP28.84■■■□□ 2.21
CPSF7-208ENST00000450000 NBPF15Q8N660 670 aa28.84■■■□□ 2.21
CPSF7-208ENST00000450000 NIP7Q9Y221 180 aaKnown RBP eCLIP28.84■■■□□ 2.21
CPSF7-208ENST00000450000 RRP7AQ9Y3A4 280 aaKnown RBP28.84■■■□□ 2.21
CPSF7-208ENST00000450000 AFDNP55196 1824 aaKnown RBP28.83■■■□□ 2.21
CPSF7-208ENST00000450000 SCN7AQ01118 1682 aa28.83■■■□□ 2.21
CPSF7-208ENST00000450000 GTF2E1P29083 439 aaPredicted RBP28.82■■■□□ 2.2
CPSF7-208ENST00000450000 TPTE2Q6XPS3 522 aa28.82■■■□□ 2.2
CPSF7-208ENST00000450000 C16orf71Q8IYS4 520 aaPredicted RBP28.82■■■□□ 2.2
CPSF7-208ENST00000450000 KDM2BQ8NHM5 1336 aa28.82■■■□□ 2.2
CPSF7-208ENST00000450000 NRXN2Q9P2S2 1712 aa28.82■■■□□ 2.2
CPSF7-208ENST00000450000 BRCA1P38398 1863 aaKnown RBP28.82■■■□□ 2.2
CPSF7-208ENST00000450000 NEUROD2Q15784 382 aa28.81■■■□□ 2.2
CPSF7-208ENST00000450000 KIF6Q6ZMV9 814 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms