RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 TNS1Q9HBL0 1735 aaKnown RBP18.72■□□□□ 0.59
TNF-208ENST00000449264 ANXA1P04083 346 aa18.72■□□□□ 0.59
TNF-208ENST00000449264 IRX6P78412 446 aaPredicted RBP18.72■□□□□ 0.59
TNF-208ENST00000449264 CICQ96RK0 1608 aaPredicted RBP18.71■□□□□ 0.59
TNF-208ENST00000449264 ATP6V1AP38606 617 aa18.71■□□□□ 0.59
TNF-208ENST00000449264 NOB1Q9ULX3 412 aaKnown RBP18.71■□□□□ 0.59
TNF-208ENST00000449264 ZNF831Q5JPB2 1677 aa18.7■□□□□ 0.58
TNF-208ENST00000449264 NEFLP07196 543 aa18.7■□□□□ 0.58
TNF-208ENST00000449264 PIP4K2AP48426 406 aaPredicted RBP18.7■□□□□ 0.58
TNF-208ENST00000449264 COL5A3P25940 1745 aaPredicted RBP18.7■□□□□ 0.58
TNF-208ENST00000449264 PROSER3Q2NL68 480 aa18.69■□□□□ 0.58
TNF-208ENST00000449264 TEX13AQ9BXU3 409 aaPredicted RBP18.69■□□□□ 0.58
TNF-208ENST00000449264 DBF4Q9UBU7 674 aaPredicted RBP18.69■□□□□ 0.58
TNF-208ENST00000449264 MYL6BP14649 208 aa18.69■□□□□ 0.58
TNF-208ENST00000449264 BRPF1P55201 1214 aaPredicted RBP18.69■□□□□ 0.58
TNF-208ENST00000449264 ZKSCAN2Q63HK3 967 aa18.69■□□□□ 0.58
TNF-208ENST00000449264 G2E3Q7L622 706 aa18.69■□□□□ 0.58
TNF-208ENST00000449264 STARD3NLO95772 234 aa18.68■□□□□ 0.58
TNF-208ENST00000449264 KCNQ4P56696 695 aa18.68■□□□□ 0.58
TNF-208ENST00000449264 ITPK1Q13572 414 aa18.68■□□□□ 0.58
TNF-208ENST00000449264 TNNQ9UQP3 1299 aa18.68■□□□□ 0.58
TNF-208ENST00000449264 A1BGP04217 495 aa18.67■□□□□ 0.58
TNF-208ENST00000449264 DDX21Q9NR30 783 aaKnown RBP eCLIP18.67■□□□□ 0.58
TNF-208ENST00000449264 CCNL1Q9UK58 526 aaPredicted RBP18.67■□□□□ 0.58
TNF-208ENST00000449264 TAF1LQ8IZX4 1826 aa18.67■□□□□ 0.58
TNF-208ENST00000449264 IPO8O15397 1037 aaKnown RBP18.66■□□□□ 0.58
TNF-208ENST00000449264 FLIIQ13045 1269 aa18.66■□□□□ 0.58
TNF-208ENST00000449264 PDIA6Q15084 440 aa18.66■□□□□ 0.58
TNF-208ENST00000449264 C20orf194Q5TEA3 1177 aa18.66■□□□□ 0.58
TNF-208ENST00000449264 CLUAP1Q96AJ1 413 aa18.66■□□□□ 0.58
TNF-208ENST00000449264 PHAXQ9H814 394 aaKnown RBP18.66■□□□□ 0.58
TNF-208ENST00000449264 CYP19A1P11511 503 aaPredicted RBP18.66■□□□□ 0.58
TNF-208ENST00000449264 TRIM27P14373 513 aa18.66■□□□□ 0.58
TNF-208ENST00000449264 ATF7IPQ6VMQ6 1270 aa18.66■□□□□ 0.58
TNF-208ENST00000449264 FTSJ3Q8IY81 847 aaKnown RBP18.66■□□□□ 0.58
TNF-208ENST00000449264 ERBB4Q15303 1308 aa18.66■□□□□ 0.58
TNF-208ENST00000449264 MYH14Q7Z406 1995 aaKnown RBP18.65■□□□□ 0.58
TNF-208ENST00000449264 APBA3O96018 575 aa18.65■□□□□ 0.58
TNF-208ENST00000449264 FKBP5Q13451 457 aaPredicted RBP18.65■□□□□ 0.58
TNF-208ENST00000449264 HYPKQ9NX55 129 aa18.65■□□□□ 0.58
TNF-208ENST00000449264 ZNF330Q9Y3S2 320 aaPredicted RBP18.65■□□□□ 0.58
TNF-208ENST00000449264 PTPRCP08575 1304 aa18.65■□□□□ 0.58
TNF-208ENST00000449264 NBPF26B4DH59 902 aa18.64■□□□□ 0.57
TNF-208ENST00000449264 NBPF14Q5TI25 921 aa18.64■□□□□ 0.57
TNF-208ENST00000449264 NBPF10Q6P3W6 841 aaKnown RBP18.64■□□□□ 0.57
TNF-208ENST00000449264 NBPF15Q8N660 670 aa18.64■□□□□ 0.57
TNF-208ENST00000449264 AIMP1Q12904 312 aaKnown RBP18.63■□□□□ 0.57
TNF-208ENST00000449264 LINC00116Q8NCU8 138 aa18.63■□□□□ 0.57
TNF-208ENST00000449264 PANK1Q8TE04 598 aa18.63■□□□□ 0.57
TNF-208ENST00000449264 RREB1Q92766 1687 aa18.63■□□□□ 0.57
TNF-208ENST00000449264 ZBTB1Q9Y2K1 713 aa18.63■□□□□ 0.57
TNF-208ENST00000449264 CRKLP46109 303 aaKnown RBP18.63■□□□□ 0.57
TNF-208ENST00000449264 ARHGAP45Q92619 1136 aa18.63■□□□□ 0.57
TNF-208ENST00000449264 API5Q9BZZ5 524 aaKnown RBP18.63■□□□□ 0.57
TNF-208ENST00000449264 RLBP1P12271 317 aa18.62■□□□□ 0.57
TNF-208ENST00000449264 FKBP8Q14318 412 aa18.62■□□□□ 0.57
TNF-208ENST00000449264 DZIP1LQ8IYY4 767 aaKnown RBP18.62■□□□□ 0.57
TNF-208ENST00000449264 XAGE3Q8WTP9 111 aa18.62■□□□□ 0.57
TNF-208ENST00000449264 RGPD3A6NKT7 1758 aaPredicted RBP18.61■□□□□ 0.57
TNF-208ENST00000449264 RGPD4Q7Z3J3 1758 aa18.61■□□□□ 0.57
TNF-208ENST00000449264 C4BP0C0L5 1744 aa18.61■□□□□ 0.57
TNF-208ENST00000449264 CCDC87Q9NVE4 849 aa18.61■□□□□ 0.57
TNF-208ENST00000449264 F6X3S4 739 aa18.6■□□□□ 0.57
TNF-208ENST00000449264 PDE3AQ14432 1141 aa18.6■□□□□ 0.57
TNF-208ENST00000449264 COPS6Q7L5N1 327 aa18.6■□□□□ 0.57
TNF-208ENST00000449264 LRP10Q7Z4F1 713 aa18.6■□□□□ 0.57
TNF-208ENST00000449264 MS4A1P11836 297 aa18.6■□□□□ 0.57
TNF-208ENST00000449264 CRBNQ96SW2 442 aa18.6■□□□□ 0.57
TNF-208ENST00000449264 LRRC4BQ9NT99 713 aa18.6■□□□□ 0.57
TNF-208ENST00000449264 ARFGEF2Q9Y6D5 1785 aa18.6■□□□□ 0.57
TNF-208ENST00000449264 ABCC4O15439 1325 aa18.59■□□□□ 0.57
TNF-208ENST00000449264 TXNRD1Q16881 649 aa18.59■□□□□ 0.57
TNF-208ENST00000449264 SLC27A3Q5K4L6 730 aa18.59■□□□□ 0.57
TNF-208ENST00000449264 INTS5Q6P9B9 1019 aaKnown RBP18.59■□□□□ 0.57
TNF-208ENST00000449264 COG6Q9Y2V7 657 aa18.59■□□□□ 0.57
TNF-208ENST00000449264 N4BP2Q86UW6 1770 aaPredicted RBP18.58■□□□□ 0.57
TNF-208ENST00000449264 CNTNAP4Q9C0A0 1308 aa18.58■□□□□ 0.57
TNF-208ENST00000449264 PLSCR1O15162 318 aa18.58■□□□□ 0.57
TNF-208ENST00000449264 DDX58O95786 925 aaKnown RBP18.58■□□□□ 0.57
TNF-208ENST00000449264 SF3B2Q13435 895 aaKnown RBP18.58■□□□□ 0.57
TNF-208ENST00000449264 SLC4A10Q6U841 1118 aa18.58■□□□□ 0.57
TNF-208ENST00000449264 TMEM57Q8N5G2 664 aa18.58■□□□□ 0.57
TNF-208ENST00000449264 NUP188Q5SRE5 1749 aa18.58■□□□□ 0.56
TNF-208ENST00000449264 ADCY9O60503 1353 aa18.58■□□□□ 0.56
TNF-208ENST00000449264 PI4KAP2A4QPH2 592 aa18.57■□□□□ 0.56
TNF-208ENST00000449264 NPM2Q86SE8 214 aaKnown RBP18.57■□□□□ 0.56
TNF-208ENST00000449264 ITPRIPQ8IWB1 547 aa18.57■□□□□ 0.56
TNF-208ENST00000449264 PI4KAP1Q8N8J0 262 aa18.57■□□□□ 0.56
TNF-208ENST00000449264 ARXQ96QS3 562 aa18.57■□□□□ 0.56
TNF-208ENST00000449264 TTLL7Q6ZT98 887 aa18.57■□□□□ 0.56
TNF-208ENST00000449264 GTF3C3Q9Y5Q9 886 aa18.57■□□□□ 0.56
TNF-208ENST00000449264 IL6STP40189 918 aaPredicted RBP18.56■□□□□ 0.56
TNF-208ENST00000449264 RIC3Q7Z5B4 369 aa18.56■□□□□ 0.56
TNF-208ENST00000449264 PROM2Q8N271 834 aa18.56■□□□□ 0.56
TNF-208ENST00000449264 EXOC6Q8TAG9 804 aa18.56■□□□□ 0.56
TNF-208ENST00000449264 MAP3K2Q9Y2U5 619 aa18.56■□□□□ 0.56
TNF-208ENST00000449264 PXDNLA1KZ92 1463 aa18.56■□□□□ 0.56
TNF-208ENST00000449264 GNPATO15228 680 aa18.55■□□□□ 0.56
TNF-208ENST00000449264 KSR2Q6VAB6 950 aa18.55■□□□□ 0.56
TNF-208ENST00000449264 KIF6Q6ZMV9 814 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms