RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 TEFQ10587 303 aa12.03□□□□□ -0.48
RFX3-207ENST00000449190 RRP7AQ9Y3A4 280 aaKnown RBP12.03□□□□□ -0.48
RFX3-207ENST00000449190 CASZ1Q86V15 1759 aa12.02□□□□□ -0.48
RFX3-207ENST00000449190 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.02□□□□□ -0.49
RFX3-207ENST00000449190 RPS6KA4O75676 772 aa12.02□□□□□ -0.49
RFX3-207ENST00000449190 SLC39A6Q13433 755 aa12.02□□□□□ -0.49
RFX3-207ENST00000449190 NGEFQ8N5V2 710 aa12.02□□□□□ -0.49
RFX3-207ENST00000449190 GNPATO15228 680 aa12.01□□□□□ -0.49
RFX3-207ENST00000449190 CALD1Q05682 793 aaKnown RBP12.01□□□□□ -0.49
RFX3-207ENST00000449190 TRAPPC3LQ5T215 181 aa12.01□□□□□ -0.49
RFX3-207ENST00000449190 VSIG10Q8N0Z9 540 aa12.01□□□□□ -0.49
RFX3-207ENST00000449190 SYT17Q9BSW7 474 aa12.01□□□□□ -0.49
RFX3-207ENST00000449190 RTCBQ9Y3I0 505 aaKnown RBP12.01□□□□□ -0.49
RFX3-207ENST00000449190 CNTNAP4Q9C0A0 1308 aa12.01□□□□□ -0.49
RFX3-207ENST00000449190 PHF14O94880 888 aa12□□□□□ -0.49
RFX3-207ENST00000449190 MCM10Q7L590 875 aa12□□□□□ -0.49
RFX3-207ENST00000449190 AMIGO3Q86WK7 504 aa12□□□□□ -0.49
RFX3-207ENST00000449190 SALL2Q9Y467 1007 aaPredicted RBP12□□□□□ -0.49
RFX3-207ENST00000449190 CRKLP46109 303 aaKnown RBP11.99□□□□□ -0.49
RFX3-207ENST00000449190 SMIM5Q71RC9 77 aa11.99□□□□□ -0.49
RFX3-207ENST00000449190 TTC5Q8N0Z6 440 aa11.99□□□□□ -0.49
RFX3-207ENST00000449190 FHDC1Q9C0D6 1143 aaPredicted RBP11.99□□□□□ -0.49
RFX3-207ENST00000449190 CEMIPQ8WUJ3 1361 aa11.99□□□□□ -0.49
RFX3-207ENST00000449190 PRR29P0C7W0 189 aa11.98□□□□□ -0.49
RFX3-207ENST00000449190 DCTN1Q14203 1278 aa11.98□□□□□ -0.49
RFX3-207ENST00000449190 ZNF790Q6PG37 636 aa11.98□□□□□ -0.49
RFX3-207ENST00000449190 DNAJC10Q8IXB1 793 aa11.98□□□□□ -0.49
RFX3-207ENST00000449190 ARHGEF1Q92888 912 aaKnown RBP11.98□□□□□ -0.49
RFX3-207ENST00000449190 TEX13AQ9BXU3 409 aaPredicted RBP11.98□□□□□ -0.49
RFX3-207ENST00000449190 PLSCR2Q9NRY7 297 aa11.98□□□□□ -0.49
RFX3-207ENST00000449190 QSER1Q2KHR3 1735 aa11.97□□□□□ -0.49
RFX3-207ENST00000449190 SENP3-EIF4A1A0A087X0R7 540 aa11.97□□□□□ -0.49
RFX3-207ENST00000449190 BTBD11A6QL63 1104 aa11.97□□□□□ -0.49
RFX3-207ENST00000449190 CYP19A1P11511 503 aaPredicted RBP11.97□□□□□ -0.49
RFX3-207ENST00000449190 TAF7Q15545 349 aaPredicted RBP11.97□□□□□ -0.49
RFX3-207ENST00000449190 CCDC27Q2M243 656 aa11.97□□□□□ -0.49
RFX3-207ENST00000449190 MSL1Q68DK7 614 aa11.97□□□□□ -0.49
RFX3-207ENST00000449190 INTS5Q6P9B9 1019 aaKnown RBP11.97□□□□□ -0.49
RFX3-207ENST00000449190 NLGN1Q8N2Q7 840 aa11.97□□□□□ -0.49
RFX3-207ENST00000449190 TRIM35Q9UPQ4 493 aa11.97□□□□□ -0.49
RFX3-207ENST00000449190 SCN11AQ9UI33 1791 aa11.97□□□□□ -0.49
RFX3-207ENST00000449190 C4BP0C0L5 1744 aa11.97□□□□□ -0.49
RFX3-207ENST00000449190 C5P01031 1676 aa11.97□□□□□ -0.49
RFX3-207ENST00000449190 MRC1P22897 1456 aa11.96□□□□□ -0.49
RFX3-207ENST00000449190 TAF1LQ8IZX4 1826 aa11.96□□□□□ -0.49
RFX3-207ENST00000449190 RFC4P35249 363 aa11.96□□□□□ -0.49
RFX3-207ENST00000449190 ZNF496Q96IT1 587 aaPredicted RBP11.96□□□□□ -0.49
RFX3-207ENST00000449190 CCDC87Q9NVE4 849 aa11.96□□□□□ -0.49
RFX3-207ENST00000449190 LAS1LQ9Y4W2 734 aaKnown RBP11.96□□□□□ -0.49
RFX3-207ENST00000449190 ZNF831Q5JPB2 1677 aa11.95□□□□□ -0.5
RFX3-207ENST00000449190 ADAMTS7Q9UKP4 1686 aa11.95□□□□□ -0.5
RFX3-207ENST00000449190 STARD3NLO95772 234 aa11.95□□□□□ -0.5
RFX3-207ENST00000449190 HNRNPUQ00839 825 aaKnown RBP eCLIP11.95□□□□□ -0.5
RFX3-207ENST00000449190 FMNL2Q96PY5 1086 aa11.95□□□□□ -0.5
RFX3-207ENST00000449190 THUMPD2Q9BTF0 503 aaKnown RBP11.95□□□□□ -0.5
RFX3-207ENST00000449190 KCNQ3O43525 872 aa11.94□□□□□ -0.5
RFX3-207ENST00000449190 WDR63Q8IWG1 891 aa11.94□□□□□ -0.5
RFX3-207ENST00000449190 WWC1Q8IX03 1113 aa11.94□□□□□ -0.5
RFX3-207ENST00000449190 BABAM1Q9NWV8 329 aa11.94□□□□□ -0.5
RFX3-207ENST00000449190 CD2APQ9Y5K6 639 aa11.94□□□□□ -0.5
RFX3-207ENST00000449190 HEG1Q9ULI3 1381 aa11.93□□□□□ -0.5
RFX3-207ENST00000449190 GYS1P13807 737 aa11.93□□□□□ -0.5
RFX3-207ENST00000449190 CD44P16070 742 aaKnown RBP11.93□□□□□ -0.5
RFX3-207ENST00000449190 GNAI1P63096 354 aa11.93□□□□□ -0.5
RFX3-207ENST00000449190 KLHL34Q8N239 644 aa11.93□□□□□ -0.5
RFX3-207ENST00000449190 TSPYL4Q9UJ04 414 aa11.93□□□□□ -0.5
RFX3-207ENST00000449190 A0A087WZG4 1122 aa11.92□□□□□ -0.5
RFX3-207ENST00000449190 SNRPA1P09661 255 aaKnown RBP11.92□□□□□ -0.5
RFX3-207ENST00000449190 IFT57Q9NWB7 429 aa11.92□□□□□ -0.5
RFX3-207ENST00000449190 MIS18AQ9NYP9 233 aa11.92□□□□□ -0.5
RFX3-207ENST00000449190 COL24A1Q17RW2 1714 aa11.91□□□□□ -0.5
RFX3-207ENST00000449190 SOS1Q07889 1333 aaPredicted RBP11.91□□□□□ -0.5
RFX3-207ENST00000449190 IL16Q14005 1332 aa11.91□□□□□ -0.5
RFX3-207ENST00000449190 TUBGCP6Q96RT7 1819 aa11.91□□□□□ -0.5
RFX3-207ENST00000449190 ZPR1O75312 459 aa11.91□□□□□ -0.5
RFX3-207ENST00000449190 MMP10P09238 476 aa11.91□□□□□ -0.5
RFX3-207ENST00000449190 CANXP27824 592 aaKnown RBP11.91□□□□□ -0.5
RFX3-207ENST00000449190 EIF5P55010 431 aaKnown RBP11.91□□□□□ -0.5
RFX3-207ENST00000449190 CFAP44Q96MT7 982 aa11.91□□□□□ -0.5
RFX3-207ENST00000449190 NARFQ9UHQ1 456 aa11.91□□□□□ -0.5
RFX3-207ENST00000449190 ZBTB1Q9Y2K1 713 aa11.91□□□□□ -0.5
RFX3-207ENST00000449190 USP16Q9Y5T5 823 aa11.91□□□□□ -0.5
RFX3-207ENST00000449190 UBR3Q6ZT12 1888 aa11.91□□□□□ -0.5
RFX3-207ENST00000449190 KCPQ6ZWJ8 1503 aa11.91□□□□□ -0.5
RFX3-207ENST00000449190 USP42Q9H9J4 1324 aaKnown RBP11.9□□□□□ -0.5
RFX3-207ENST00000449190 CHL1O00533 1208 aa11.9□□□□□ -0.5
RFX3-207ENST00000449190 TM4SF1P30408 202 aa11.9□□□□□ -0.5
RFX3-207ENST00000449190 CLCN6P51797 869 aa11.9□□□□□ -0.5
RFX3-207ENST00000449190 GOLGA2Q08379 1002 aa11.9□□□□□ -0.5
RFX3-207ENST00000449190 MYH16Q9H6N6 1097 aa11.9□□□□□ -0.5
RFX3-207ENST00000449190 SRP68Q9UHB9 627 aaKnown RBP11.9□□□□□ -0.5
RFX3-207ENST00000449190 PARP3Q9Y6F1 533 aa11.9□□□□□ -0.5
RFX3-207ENST00000449190 A1BGP04217 495 aa11.89□□□□□ -0.51
RFX3-207ENST00000449190 IL6STP40189 918 aaPredicted RBP11.89□□□□□ -0.51
RFX3-207ENST00000449190 FKBP8Q14318 412 aa11.89□□□□□ -0.51
RFX3-207ENST00000449190 GPR162Q16538 588 aa11.89□□□□□ -0.51
RFX3-207ENST00000449190 USPL1Q5W0Q7 1092 aa11.89□□□□□ -0.51
RFX3-207ENST00000449190 NLGN2Q8NFZ4 835 aa11.89□□□□□ -0.51
RFX3-207ENST00000449190 MYH14Q7Z406 1995 aaKnown RBP11.88□□□□□ -0.51
RFX3-207ENST00000449190 E9PSI1 815 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms