RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 C10orf71Q711Q0 1435 aa26.2■■□□□ 1.78
VCP-203ENST00000448530 COL15A1P39059 1388 aa26.2■■□□□ 1.78
VCP-203ENST00000448530 HEG1Q9ULI3 1381 aa26.2■■□□□ 1.78
VCP-203ENST00000448530 CANXP27824 592 aaKnown RBP26.19■■□□□ 1.78
VCP-203ENST00000448530 USPL1Q5W0Q7 1092 aa26.19■■□□□ 1.78
VCP-203ENST00000448530 N4BP2Q86UW6 1770 aaPredicted RBP26.18■■□□□ 1.78
VCP-203ENST00000448530 PXDNLA1KZ92 1463 aa26.17■■□□□ 1.78
VCP-203ENST00000448530 MCM10Q7L590 875 aa26.17■■□□□ 1.78
VCP-203ENST00000448530 NARFQ9UHQ1 456 aa26.17■■□□□ 1.78
VCP-203ENST00000448530 HTATSF1O43719 755 aaKnown RBP26.16■■□□□ 1.78
VCP-203ENST00000448530 A0A0G2JLW4 131 aa26.15■■□□□ 1.78
VCP-203ENST00000448530 DDX10Q13206 875 aaKnown RBP26.15■■□□□ 1.78
VCP-203ENST00000448530 RALBP1Q15311 655 aa26.15■■□□□ 1.78
VCP-203ENST00000448530 A0A087WZG4 1122 aa26.14■■□□□ 1.78
VCP-203ENST00000448530 DDR1Q08345 913 aa26.14■■□□□ 1.78
VCP-203ENST00000448530 NPM2Q86SE8 214 aaKnown RBP26.14■■□□□ 1.78
VCP-203ENST00000448530 PNNQ9H307 717 aaKnown RBP26.14■■□□□ 1.78
VCP-203ENST00000448530 KIAA1551Q9HCM1 1747 aa26.14■■□□□ 1.77
VCP-203ENST00000448530 DPEP1P16444 411 aa26.12■■□□□ 1.77
VCP-203ENST00000448530 TM4SF1P30408 202 aa26.12■■□□□ 1.77
VCP-203ENST00000448530 BCS1LQ9Y276 419 aa26.12■■□□□ 1.77
VCP-203ENST00000448530 ZNF330Q9Y3S2 320 aaPredicted RBP26.12■■□□□ 1.77
VCP-203ENST00000448530 POLRMTO00411 1230 aaKnown RBP26.11■■□□□ 1.77
VCP-203ENST00000448530 KCNQ3O43525 872 aa26.11■■□□□ 1.77
VCP-203ENST00000448530 EIF5P55010 431 aaKnown RBP26.11■■□□□ 1.77
VCP-203ENST00000448530 DCTN1Q14203 1278 aa26.11■■□□□ 1.77
VCP-203ENST00000448530 MAPK8IP3Q9UPT6 1336 aa26.11■■□□□ 1.77
VCP-203ENST00000448530 DLG5Q8TDM6 1919 aa26.08■■□□□ 1.77
VCP-203ENST00000448530 IL6STP40189 918 aaPredicted RBP26.08■■□□□ 1.77
VCP-203ENST00000448530 NFIXQ14938 502 aa26.08■■□□□ 1.77
VCP-203ENST00000448530 A1BGP04217 495 aa26.07■■□□□ 1.76
VCP-203ENST00000448530 TAF7Q15545 349 aaPredicted RBP26.07■■□□□ 1.76
VCP-203ENST00000448530 SNRPA1P09661 255 aaKnown RBP26.06■■□□□ 1.76
VCP-203ENST00000448530 PLEKHF1Q96S99 279 aa26.06■■□□□ 1.76
VCP-203ENST00000448530 BCL2L12Q9HB09 334 aa26.06■■□□□ 1.76
VCP-203ENST00000448530 PIM2Q9P1W9 311 aa26.06■■□□□ 1.76
VCP-203ENST00000448530 AFDNP55196 1824 aaKnown RBP26.05■■□□□ 1.76
VCP-203ENST00000448530 BRCA1P38398 1863 aaKnown RBP26.05■■□□□ 1.76
VCP-203ENST00000448530 NFE2L2Q16236 605 aa26.05■■□□□ 1.76
VCP-203ENST00000448530 GIGYF1O75420 1035 aaPredicted RBP26.04■■□□□ 1.76
VCP-203ENST00000448530 SERPINB2P05120 415 aa26.04■■□□□ 1.76
VCP-203ENST00000448530 BICDL1Q6ZP65 573 aa26.04■■□□□ 1.76
VCP-203ENST00000448530 TBC1D2BQ9UPU7 963 aa26.04■■□□□ 1.76
VCP-203ENST00000448530 ATP10DQ9P241 1426 aa26.04■■□□□ 1.76
VCP-203ENST00000448530 ARHGAP27Q6ZUM4 889 aa26.03■■□□□ 1.76
VCP-203ENST00000448530 PNISRQ8TF01 805 aaKnown RBP26.03■■□□□ 1.76
VCP-203ENST00000448530 USP16Q9Y5T5 823 aa26.03■■□□□ 1.76
VCP-203ENST00000448530 MYBBP1AQ9BQG0 1328 aaKnown RBP26.03■■□□□ 1.76
VCP-203ENST00000448530 KCNA3P22001 575 aa26.02■■□□□ 1.76
VCP-203ENST00000448530 DALRD3Q5D0E6 543 aaKnown RBP26.02■■□□□ 1.76
VCP-203ENST00000448530 SCN7AQ01118 1682 aa26.02■■□□□ 1.76
VCP-203ENST00000448530 CHRNA5P30532 468 aa26.01■■□□□ 1.75
VCP-203ENST00000448530 ARFGEF1Q9Y6D6 1849 aa26■■□□□ 1.75
VCP-203ENST00000448530 NRXN2Q9P2S2 1712 aa26■■□□□ 1.75
VCP-203ENST00000448530 MIS18AQ9NYP9 233 aa26■■□□□ 1.75
VCP-203ENST00000448530 PRAMEF22A3QJZ6 481 aa25.99■■□□□ 1.75
VCP-203ENST00000448530 DZIP3Q86Y13 1208 aaKnown RBP25.99■■□□□ 1.75
VCP-203ENST00000448530 GPBP1L1Q9HC44 474 aaPredicted RBP25.99■■□□□ 1.75
VCP-203ENST00000448530 ADCY9O60503 1353 aa25.98■■□□□ 1.75
VCP-203ENST00000448530 TBC1D9BQ66K14 1250 aa25.98■■□□□ 1.75
VCP-203ENST00000448530 PIP4K2AP48426 406 aaPredicted RBP25.97■■□□□ 1.75
VCP-203ENST00000448530 C1QTNF8P60827 252 aa25.97■■□□□ 1.75
VCP-203ENST00000448530 ZNF526Q8TF50 670 aaPredicted RBP25.97■■□□□ 1.75
VCP-203ENST00000448530 CARMIL3Q8ND23 1372 aa25.96■■□□□ 1.75
VCP-203ENST00000448530 NPHP1O15259 732 aa25.96■■□□□ 1.75
VCP-203ENST00000448530 SETDB2Q96T68 719 aa25.96■■□□□ 1.75
VCP-203ENST00000448530 THUMPD2Q9BTF0 503 aaKnown RBP25.96■■□□□ 1.75
VCP-203ENST00000448530 KDM3BQ7LBC6 1761 aa25.95■■□□□ 1.75
VCP-203ENST00000448530 CAMTA2O94983 1202 aa25.95■■□□□ 1.74
VCP-203ENST00000448530 WDR43Q15061 677 aaKnown RBP eCLIP25.94■■□□□ 1.74
VCP-203ENST00000448530 ZNF652Q9Y2D9 606 aa25.94■■□□□ 1.74
VCP-203ENST00000448530 LAMB4A4D0S4 1761 aa25.94■■□□□ 1.74
VCP-203ENST00000448530 BCORQ6W2J9 1755 aa25.94■■□□□ 1.74
VCP-203ENST00000448530 H0YIN7 160 aa25.93■■□□□ 1.74
VCP-203ENST00000448530 RIPK4P57078 832 aa25.93■■□□□ 1.74
VCP-203ENST00000448530 C2CD5Q86YS7 1000 aa25.93■■□□□ 1.74
VCP-203ENST00000448530 LMOD3Q0VAK6 560 aa25.92■■□□□ 1.74
VCP-203ENST00000448530 DLEC1Q9Y238 1755 aa25.92■■□□□ 1.74
VCP-203ENST00000448530 PDZRN3Q9UPQ7 1066 aa25.91■■□□□ 1.74
VCP-203ENST00000448530 NBPF26B4DH59 902 aa25.9■■□□□ 1.74
VCP-203ENST00000448530 PDE6BP35913 854 aa25.9■■□□□ 1.74
VCP-203ENST00000448530 EIF4A1P60842 406 aaKnown RBP25.9■■□□□ 1.74
VCP-203ENST00000448530 NBPF10Q6P3W6 841 aaKnown RBP25.9■■□□□ 1.74
VCP-203ENST00000448530 CLEC4GQ6UXB4 293 aa25.9■■□□□ 1.74
VCP-203ENST00000448530 NBPF15Q8N660 670 aa25.9■■□□□ 1.74
VCP-203ENST00000448530 TTLL6Q8N841 843 aa25.9■■□□□ 1.74
VCP-203ENST00000448530 CNBD1Q8NA66 436 aa25.9■■□□□ 1.74
VCP-203ENST00000448530 BRIP1Q9BX63 1249 aa25.9■■□□□ 1.74
VCP-203ENST00000448530 ZEB1P37275 1124 aaPredicted RBP25.89■■□□□ 1.74
VCP-203ENST00000448530 TMPOP42166 694 aaKnown RBP25.89■■□□□ 1.74
VCP-203ENST00000448530 PRR5LQ6MZQ0 368 aa25.89■■□□□ 1.74
VCP-203ENST00000448530 ST5P78524 1137 aa25.88■■□□□ 1.73
VCP-203ENST00000448530 TSPYL4Q9UJ04 414 aa25.88■■□□□ 1.73
VCP-203ENST00000448530 C9orf131Q5VYM1 1079 aa25.87■■□□□ 1.73
VCP-203ENST00000448530 CCDC146Q8IYE0 955 aa25.87■■□□□ 1.73
VCP-203ENST00000448530 PRKRIP1Q9H875 184 aaPredicted RBP25.87■■□□□ 1.73
VCP-203ENST00000448530 ANKRD31Q8N7Z5 1873 aa25.87■■□□□ 1.73
VCP-203ENST00000448530 SENP3-EIF4A1A0A087X0R7 540 aa25.86■■□□□ 1.73
VCP-203ENST00000448530 NBPF5PQ86XG9 351 aaPredicted RBP25.86■■□□□ 1.73
VCP-203ENST00000448530 CCDC24Q8N4L8 307 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms