RNA–Protein interactions for RNA: ENST00000448502.5

UBE2F-217, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 4

Gene UBE2F, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-217ENST00000448502 COL15A1P39059 1388 aa27.41■■□□□ 1.98
UBE2F-217ENST00000448502 HSPA6P17066 643 aa27.41■■□□□ 1.98
UBE2F-217ENST00000448502 CNGB1Q14028 1251 aaPredicted RBP27.41■■□□□ 1.98
UBE2F-217ENST00000448502 CHRNA5P30532 468 aa27.4■■□□□ 1.98
UBE2F-217ENST00000448502 VSIG10Q8N0Z9 540 aa27.39■■□□□ 1.98
UBE2F-217ENST00000448502 NARFQ9UHQ1 456 aa27.39■■□□□ 1.98
UBE2F-217ENST00000448502 U2SURPO15042 1029 aaKnown RBP27.38■■□□□ 1.97
UBE2F-217ENST00000448502 DALRD3Q5D0E6 543 aaKnown RBP27.38■■□□□ 1.97
UBE2F-217ENST00000448502 NRXN2Q9P2S2 1712 aa27.38■■□□□ 1.97
UBE2F-217ENST00000448502 SIPA1L3O60292 1781 aaPredicted RBP27.37■■□□□ 1.97
UBE2F-217ENST00000448502 NFIXQ14938 502 aa27.37■■□□□ 1.97
UBE2F-217ENST00000448502 BCL2L12Q9HB09 334 aa27.37■■□□□ 1.97
UBE2F-217ENST00000448502 C9orf131Q5VYM1 1079 aa27.36■■□□□ 1.97
UBE2F-217ENST00000448502 IL17REQ8NFR9 667 aa27.35■■□□□ 1.97
UBE2F-217ENST00000448502 SBF1O95248 1867 aa27.34■■□□□ 1.97
UBE2F-217ENST00000448502 GNAT3A8MTJ3 354 aa27.33■■□□□ 1.97
UBE2F-217ENST00000448502 CANXP27824 592 aaKnown RBP27.33■■□□□ 1.97
UBE2F-217ENST00000448502 TTC5Q8N0Z6 440 aa27.33■■□□□ 1.97
UBE2F-217ENST00000448502 NMRK2Q9NPI5 230 aa27.33■■□□□ 1.97
UBE2F-217ENST00000448502 GAS2L2Q8NHY3 880 aa27.32■■□□□ 1.96
UBE2F-217ENST00000448502 ZNF496Q96IT1 587 aaPredicted RBP27.32■■□□□ 1.96
UBE2F-217ENST00000448502 DLEC1Q9Y238 1755 aa27.32■■□□□ 1.96
UBE2F-217ENST00000448502 STARD3NLO95772 234 aa27.3■■□□□ 1.96
UBE2F-217ENST00000448502 EIF5P55010 431 aaKnown RBP27.3■■□□□ 1.96
UBE2F-217ENST00000448502 TEFQ10587 303 aa27.3■■□□□ 1.96
UBE2F-217ENST00000448502 ZNF790Q6PG37 636 aa27.3■■□□□ 1.96
UBE2F-217ENST00000448502 HEG1Q9ULI3 1381 aa27.3■■□□□ 1.96
UBE2F-217ENST00000448502 TOMM70O94826 608 aa27.29■■□□□ 1.96
UBE2F-217ENST00000448502 SERPINB2P05120 415 aa27.29■■□□□ 1.96
UBE2F-217ENST00000448502 PHACTR3Q96KR7 559 aa27.28■■□□□ 1.96
UBE2F-217ENST00000448502 RNF181Q9P0P0 153 aa27.28■■□□□ 1.96
UBE2F-217ENST00000448502 CARMIL3Q8ND23 1372 aa27.27■■□□□ 1.96
UBE2F-217ENST00000448502 CEMIPQ8WUJ3 1361 aa27.27■■□□□ 1.96
UBE2F-217ENST00000448502 SCN7AQ01118 1682 aa27.27■■□□□ 1.96
UBE2F-217ENST00000448502 RSPH6AQ9H0K4 717 aa27.26■■□□□ 1.95
UBE2F-217ENST00000448502 PRKAR2BP31323 418 aa27.25■■□□□ 1.95
UBE2F-217ENST00000448502 A0A087WZG4 1122 aa27.24■■□□□ 1.95
UBE2F-217ENST00000448502 BICDL1Q6ZP65 573 aa27.24■■□□□ 1.95
UBE2F-217ENST00000448502 ANKRD31Q8N7Z5 1873 aa27.23■■□□□ 1.95
UBE2F-217ENST00000448502 TEX13AQ9BXU3 409 aaPredicted RBP27.23■■□□□ 1.95
UBE2F-217ENST00000448502 KCNQ3O43525 872 aa27.22■■□□□ 1.95
UBE2F-217ENST00000448502 RASSF7Q02833 373 aa27.22■■□□□ 1.95
UBE2F-217ENST00000448502 TBC1D9BQ66K14 1250 aa27.22■■□□□ 1.95
UBE2F-217ENST00000448502 CFAP53Q96M91 514 aa27.22■■□□□ 1.95
UBE2F-217ENST00000448502 FMNL2Q96PY5 1086 aa27.22■■□□□ 1.95
UBE2F-217ENST00000448502 C2CD5Q86YS7 1000 aa27.21■■□□□ 1.95
UBE2F-217ENST00000448502 TBC1D2BQ9UPU7 963 aa27.21■■□□□ 1.95
UBE2F-217ENST00000448502 IL6STP40189 918 aaPredicted RBP27.2■■□□□ 1.94
UBE2F-217ENST00000448502 APLP1P51693 650 aa27.2■■□□□ 1.94
UBE2F-217ENST00000448502 ZNF330Q9Y3S2 320 aaPredicted RBP27.2■■□□□ 1.94
UBE2F-217ENST00000448502 KDM2BQ8NHM5 1336 aa27.19■■□□□ 1.94
UBE2F-217ENST00000448502 A1BGP04217 495 aa27.19■■□□□ 1.94
UBE2F-217ENST00000448502 PRELPP51888 382 aa27.19■■□□□ 1.94
UBE2F-217ENST00000448502 TTLL6Q8N841 843 aa27.19■■□□□ 1.94
UBE2F-217ENST00000448502 TNRC6CQ9HCJ0 1690 aaKnown RBP27.19■■□□□ 1.94
UBE2F-217ENST00000448502 CCDC88AQ3V6T2 1871 aa27.19■■□□□ 1.94
UBE2F-217ENST00000448502 BTBD11A6QL63 1104 aa27.18■■□□□ 1.94
UBE2F-217ENST00000448502 PPP2R1AP30153 589 aa27.18■■□□□ 1.94
UBE2F-217ENST00000448502 RBM46Q8TBY0 533 aaKnown RBP27.18■■□□□ 1.94
UBE2F-217ENST00000448502 COL11A2P13942 1736 aaPredicted RBP27.17■■□□□ 1.94
UBE2F-217ENST00000448502 H0YIN7 160 aa27.17■■□□□ 1.94
UBE2F-217ENST00000448502 NUDCQ9Y266 331 aa27.16■■□□□ 1.94
UBE2F-217ENST00000448502 BCORQ6W2J9 1755 aa27.16■■□□□ 1.94
UBE2F-217ENST00000448502 U2AF1L5P0DN76 240 aaPredicted RBP27.15■■□□□ 1.94
UBE2F-217ENST00000448502 U2AF1Q01081 240 aaKnown RBP eCLIP27.15■■□□□ 1.94
UBE2F-217ENST00000448502 PRR5LQ6MZQ0 368 aa27.15■■□□□ 1.94
UBE2F-217ENST00000448502 C16orf71Q8IYS4 520 aaPredicted RBP27.15■■□□□ 1.94
UBE2F-217ENST00000448502 CCDC24Q8N4L8 307 aa27.15■■□□□ 1.94
UBE2F-217ENST00000448502 RRAGCQ9HB90 399 aa27.15■■□□□ 1.94
UBE2F-217ENST00000448502 WDR90Q96KV7 1748 aa27.15■■□□□ 1.94
UBE2F-217ENST00000448502 CAMTA2O94983 1202 aa27.14■■□□□ 1.94
UBE2F-217ENST00000448502 LMNB1P20700 586 aa27.14■■□□□ 1.94
UBE2F-217ENST00000448502 DNAJC5GQ8N7S2 189 aa27.14■■□□□ 1.94
UBE2F-217ENST00000448502 ZC3H4Q9UPT8 1303 aaKnown RBP27.14■■□□□ 1.93
UBE2F-217ENST00000448502 TIAM2Q8IVF5 1701 aa27.13■■□□□ 1.93
UBE2F-217ENST00000448502 NFKBIEO00221 500 aa27.13■■□□□ 1.93
UBE2F-217ENST00000448502 MCM10Q7L590 875 aa27.13■■□□□ 1.93
UBE2F-217ENST00000448502 BRIP1Q9BX63 1249 aa27.13■■□□□ 1.93
UBE2F-217ENST00000448502 USP16Q9Y5T5 823 aa27.13■■□□□ 1.93
UBE2F-217ENST00000448502 PRAMEF22A3QJZ6 481 aa27.12■■□□□ 1.93
UBE2F-217ENST00000448502 PIP4K2AP48426 406 aaPredicted RBP27.12■■□□□ 1.93
UBE2F-217ENST00000448502 IFFO2Q5TF58 517 aa27.12■■□□□ 1.93
UBE2F-217ENST00000448502 PDE6BP35913 854 aa27.1■■□□□ 1.93
UBE2F-217ENST00000448502 FSTL1Q12841 308 aa27.1■■□□□ 1.93
UBE2F-217ENST00000448502 ZNF622Q969S3 477 aaKnown RBP eCLIP27.1■■□□□ 1.93
UBE2F-217ENST00000448502 FER1L6Q2WGJ9 1857 aa27.09■■□□□ 1.93
UBE2F-217ENST00000448502 DCTN1Q14203 1278 aa27.09■■□□□ 1.93
UBE2F-217ENST00000448502 NPM2Q86SE8 214 aaKnown RBP27.09■■□□□ 1.93
UBE2F-217ENST00000448502 DZIP3Q86Y13 1208 aaKnown RBP27.09■■□□□ 1.93
UBE2F-217ENST00000448502 RTF1Q92541 710 aaKnown RBP27.09■■□□□ 1.93
UBE2F-217ENST00000448502 SETDB2Q96T68 719 aa27.09■■□□□ 1.93
UBE2F-217ENST00000448502 PDZRN3Q9UPQ7 1066 aa27.09■■□□□ 1.93
UBE2F-217ENST00000448502 CACNA1SQ13698 1873 aa27.07■■□□□ 1.92
UBE2F-217ENST00000448502 CNBD1Q8NA66 436 aa27.07■■□□□ 1.92
UBE2F-217ENST00000448502 DICER1Q9UPY3 1922 aaKnown RBP27.06■■□□□ 1.92
UBE2F-217ENST00000448502 GLTPD2A6NH11 291 aa27.06■■□□□ 1.92
UBE2F-217ENST00000448502 C21orf2O43822 256 aa27.06■■□□□ 1.92
UBE2F-217ENST00000448502 SNRPA1P09661 255 aaKnown RBP27.06■■□□□ 1.92
UBE2F-217ENST00000448502 HTRA3P83110 453 aa27.06■■□□□ 1.92
UBE2F-217ENST00000448502 ZNF219Q9P2Y4 722 aaPredicted RBP27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms