RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 NEFMP07197 916 aa23.55■■□□□ 1.36
DDX56-207ENST00000448192 CANXP27824 592 aaKnown RBP23.55■■□□□ 1.36
DDX56-207ENST00000448192 KIAA1551Q9HCM1 1747 aa23.55■■□□□ 1.36
DDX56-207ENST00000448192 COL15A1P39059 1388 aa23.54■■□□□ 1.36
DDX56-207ENST00000448192 C10orf71Q711Q0 1435 aa23.54■■□□□ 1.36
DDX56-207ENST00000448192 USPL1Q5W0Q7 1092 aa23.54■■□□□ 1.36
DDX56-207ENST00000448192 FMNL2Q96PY5 1086 aa23.54■■□□□ 1.36
DDX56-207ENST00000448192 DLG5Q8TDM6 1919 aa23.54■■□□□ 1.36
DDX56-207ENST00000448192 KCNQ3O43525 872 aa23.53■■□□□ 1.36
DDX56-207ENST00000448192 DCTN1Q14203 1278 aa23.53■■□□□ 1.36
DDX56-207ENST00000448192 TEX13AQ9BXU3 409 aaPredicted RBP23.53■■□□□ 1.36
DDX56-207ENST00000448192 PXDNLA1KZ92 1463 aa23.53■■□□□ 1.36
DDX56-207ENST00000448192 TGFB2P61812 414 aa23.52■■□□□ 1.36
DDX56-207ENST00000448192 NARFQ9UHQ1 456 aa23.52■■□□□ 1.36
DDX56-207ENST00000448192 A0A0G2JLW4 131 aa23.51■■□□□ 1.35
DDX56-207ENST00000448192 DDR1Q08345 913 aa23.51■■□□□ 1.35
DDX56-207ENST00000448192 RALBP1Q15311 655 aa23.51■■□□□ 1.35
DDX56-207ENST00000448192 HTATSF1O43719 755 aaKnown RBP23.5■■□□□ 1.35
DDX56-207ENST00000448192 TM4SF1P30408 202 aa23.49■■□□□ 1.35
DDX56-207ENST00000448192 ZNF330Q9Y3S2 320 aaPredicted RBP23.49■■□□□ 1.35
DDX56-207ENST00000448192 DPEP1P16444 411 aa23.48■■□□□ 1.35
DDX56-207ENST00000448192 AFDNP55196 1824 aaKnown RBP23.47■■□□□ 1.35
DDX56-207ENST00000448192 POLRMTO00411 1230 aaKnown RBP23.47■■□□□ 1.35
DDX56-207ENST00000448192 EIF5P55010 431 aaKnown RBP23.47■■□□□ 1.35
DDX56-207ENST00000448192 PLEKHF1Q96S99 279 aa23.47■■□□□ 1.35
DDX56-207ENST00000448192 A0A087WZG4 1122 aa23.46■■□□□ 1.35
DDX56-207ENST00000448192 A1BGP04217 495 aa23.46■■□□□ 1.35
DDX56-207ENST00000448192 BRCA1P38398 1863 aaKnown RBP23.46■■□□□ 1.35
DDX56-207ENST00000448192 PNNQ9H307 717 aaKnown RBP23.46■■□□□ 1.35
DDX56-207ENST00000448192 BCL2L12Q9HB09 334 aa23.46■■□□□ 1.35
DDX56-207ENST00000448192 BCS1LQ9Y276 419 aa23.46■■□□□ 1.35
DDX56-207ENST00000448192 MAPK8IP3Q9UPT6 1336 aa23.45■■□□□ 1.34
DDX56-207ENST00000448192 NFIXQ14938 502 aa23.45■■□□□ 1.34
DDX56-207ENST00000448192 TAF7Q15545 349 aaPredicted RBP23.44■■□□□ 1.34
DDX56-207ENST00000448192 NPM2Q86SE8 214 aaKnown RBP23.44■■□□□ 1.34
DDX56-207ENST00000448192 PRAMEF22A3QJZ6 481 aa23.43■■□□□ 1.34
DDX56-207ENST00000448192 IL6STP40189 918 aaPredicted RBP23.43■■□□□ 1.34
DDX56-207ENST00000448192 NFE2L2Q16236 605 aa23.43■■□□□ 1.34
DDX56-207ENST00000448192 MIS18AQ9NYP9 233 aa23.43■■□□□ 1.34
DDX56-207ENST00000448192 TBC1D2BQ9UPU7 963 aa23.43■■□□□ 1.34
DDX56-207ENST00000448192 USP16Q9Y5T5 823 aa23.43■■□□□ 1.34
DDX56-207ENST00000448192 SCN7AQ01118 1682 aa23.42■■□□□ 1.34
DDX56-207ENST00000448192 MYBBP1AQ9BQG0 1328 aaKnown RBP23.42■■□□□ 1.34
DDX56-207ENST00000448192 SNRPA1P09661 255 aaKnown RBP23.42■■□□□ 1.34
DDX56-207ENST00000448192 BICDL1Q6ZP65 573 aa23.42■■□□□ 1.34
DDX56-207ENST00000448192 KCNA3P22001 575 aa23.41■■□□□ 1.34
DDX56-207ENST00000448192 NRXN2Q9P2S2 1712 aa23.41■■□□□ 1.34
DDX56-207ENST00000448192 SERPINB2P05120 415 aa23.4■■□□□ 1.34
DDX56-207ENST00000448192 PIP4K2AP48426 406 aaPredicted RBP23.4■■□□□ 1.34
DDX56-207ENST00000448192 PIM2Q9P1W9 311 aa23.4■■□□□ 1.34
DDX56-207ENST00000448192 ARFGEF1Q9Y6D6 1849 aa23.39■■□□□ 1.33
DDX56-207ENST00000448192 CHRNA5P30532 468 aa23.39■■□□□ 1.33
DDX56-207ENST00000448192 THUMPD2Q9BTF0 503 aaKnown RBP23.39■■□□□ 1.33
DDX56-207ENST00000448192 KDM3BQ7LBC6 1761 aa23.39■■□□□ 1.33
DDX56-207ENST00000448192 ARHGAP27Q6ZUM4 889 aa23.38■■□□□ 1.33
DDX56-207ENST00000448192 ATP10DQ9P241 1426 aa23.38■■□□□ 1.33
DDX56-207ENST00000448192 TBC1D9BQ66K14 1250 aa23.37■■□□□ 1.33
DDX56-207ENST00000448192 PNISRQ8TF01 805 aaKnown RBP23.37■■□□□ 1.33
DDX56-207ENST00000448192 BCORQ6W2J9 1755 aa23.37■■□□□ 1.33
DDX56-207ENST00000448192 DALRD3Q5D0E6 543 aaKnown RBP23.36■■□□□ 1.33
DDX56-207ENST00000448192 DZIP3Q86Y13 1208 aaKnown RBP23.36■■□□□ 1.33
DDX56-207ENST00000448192 LAMB4A4D0S4 1761 aa23.36■■□□□ 1.33
DDX56-207ENST00000448192 GIGYF1O75420 1035 aaPredicted RBP23.34■■□□□ 1.33
DDX56-207ENST00000448192 CAMTA2O94983 1202 aa23.34■■□□□ 1.33
DDX56-207ENST00000448192 RIPK4P57078 832 aa23.34■■□□□ 1.33
DDX56-207ENST00000448192 ZNF526Q8TF50 670 aaPredicted RBP23.34■■□□□ 1.33
DDX56-207ENST00000448192 ADCY9O60503 1353 aa23.34■■□□□ 1.33
DDX56-207ENST00000448192 DLEC1Q9Y238 1755 aa23.32■■□□□ 1.32
DDX56-207ENST00000448192 CARMIL3Q8ND23 1372 aa23.32■■□□□ 1.32
DDX56-207ENST00000448192 NBPF26B4DH59 902 aa23.32■■□□□ 1.32
DDX56-207ENST00000448192 WDR43Q15061 677 aaKnown RBP eCLIP23.32■■□□□ 1.32
DDX56-207ENST00000448192 NBPF10Q6P3W6 841 aaKnown RBP23.32■■□□□ 1.32
DDX56-207ENST00000448192 CCDC146Q8IYE0 955 aa23.32■■□□□ 1.32
DDX56-207ENST00000448192 NBPF15Q8N660 670 aa23.32■■□□□ 1.32
DDX56-207ENST00000448192 SETDB2Q96T68 719 aa23.32■■□□□ 1.32
DDX56-207ENST00000448192 PRKRIP1Q9H875 184 aaPredicted RBP23.31■■□□□ 1.32
DDX56-207ENST00000448192 GPBP1L1Q9HC44 474 aaPredicted RBP23.31■■□□□ 1.32
DDX56-207ENST00000448192 ANKRD31Q8N7Z5 1873 aa23.3■■□□□ 1.32
DDX56-207ENST00000448192 TMPOP42166 694 aaKnown RBP23.3■■□□□ 1.32
DDX56-207ENST00000448192 C1QTNF8P60827 252 aa23.3■■□□□ 1.32
DDX56-207ENST00000448192 EIF4A1P60842 406 aaKnown RBP23.3■■□□□ 1.32
DDX56-207ENST00000448192 C2CD5Q86YS7 1000 aa23.3■■□□□ 1.32
DDX56-207ENST00000448192 CCDC24Q8N4L8 307 aa23.3■■□□□ 1.32
DDX56-207ENST00000448192 H0YIN7 160 aa23.29■■□□□ 1.32
DDX56-207ENST00000448192 NPHP1O15259 732 aa23.29■■□□□ 1.32
DDX56-207ENST00000448192 ZEB1P37275 1124 aaPredicted RBP23.29■■□□□ 1.32
DDX56-207ENST00000448192 RRP7AQ9Y3A4 280 aaKnown RBP23.29■■□□□ 1.32
DDX56-207ENST00000448192 NEUROD2Q15784 382 aa23.28■■□□□ 1.32
DDX56-207ENST00000448192 PRR5LQ6MZQ0 368 aa23.28■■□□□ 1.32
DDX56-207ENST00000448192 TSPYL4Q9UJ04 414 aa23.28■■□□□ 1.32
DDX56-207ENST00000448192 ZNF652Q9Y2D9 606 aa23.28■■□□□ 1.32
DDX56-207ENST00000448192 LMOD3Q0VAK6 560 aa23.27■■□□□ 1.32
DDX56-207ENST00000448192 CNBD1Q8NA66 436 aa23.27■■□□□ 1.32
DDX56-207ENST00000448192 CLEC4GQ6UXB4 293 aa23.26■■□□□ 1.31
DDX56-207ENST00000448192 NGEFQ8N5V2 710 aa23.26■■□□□ 1.31
DDX56-207ENST00000448192 BRIP1Q9BX63 1249 aa23.26■■□□□ 1.31
DDX56-207ENST00000448192 ADAMTS8Q9UP79 889 aa23.26■■□□□ 1.31
DDX56-207ENST00000448192 PDE6BP35913 854 aa23.25■■□□□ 1.31
DDX56-207ENST00000448192 TTLL6Q8N841 843 aa23.25■■□□□ 1.31
DDX56-207ENST00000448192 RUNDC1Q96C34 613 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms