RNA–Protein interactions for RNA: ENST00000447872.5

VSTM1-206, Transcript of V-set and transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene VSTM1, Length 1,041 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-206ENST00000447872 U2SURPO15042 1029 aaKnown RBP13.95□□□□□ -0.18
VSTM1-206ENST00000447872 USPL1Q5W0Q7 1092 aa13.95□□□□□ -0.18
VSTM1-206ENST00000447872 VSIG10Q8N0Z9 540 aa13.95□□□□□ -0.18
VSTM1-206ENST00000447872 POLRMTO00411 1230 aaKnown RBP13.94□□□□□ -0.18
VSTM1-206ENST00000447872 TOMM70O94826 608 aa13.94□□□□□ -0.18
VSTM1-206ENST00000447872 STARD3NLO95772 234 aa13.94□□□□□ -0.18
VSTM1-206ENST00000447872 TTC5Q8N0Z6 440 aa13.94□□□□□ -0.18
VSTM1-206ENST00000447872 WDR90Q96KV7 1748 aa13.93□□□□□ -0.18
VSTM1-206ENST00000447872 CHRNA5P30532 468 aa13.93□□□□□ -0.18
VSTM1-206ENST00000447872 C9orf131Q5VYM1 1079 aa13.93□□□□□ -0.18
VSTM1-206ENST00000447872 NARFQ9UHQ1 456 aa13.93□□□□□ -0.18
VSTM1-206ENST00000447872 NPC1L1Q9UHC9 1359 aa13.93□□□□□ -0.18
VSTM1-206ENST00000447872 GNAT3A8MTJ3 354 aa13.92□□□□□ -0.18
VSTM1-206ENST00000447872 TEFQ10587 303 aa13.92□□□□□ -0.18
VSTM1-206ENST00000447872 NFIXQ14938 502 aa13.92□□□□□ -0.18
VSTM1-206ENST00000447872 GAS2L2Q8NHY3 880 aa13.92□□□□□ -0.18
VSTM1-206ENST00000447872 ZBTB1Q9Y2K1 713 aa13.92□□□□□ -0.18
VSTM1-206ENST00000447872 C4AP0C0L4 1744 aa13.91□□□□□ -0.18
VSTM1-206ENST00000447872 CANXP27824 592 aaKnown RBP13.91□□□□□ -0.18
VSTM1-206ENST00000447872 TEX13AQ9BXU3 409 aaPredicted RBP13.91□□□□□ -0.18
VSTM1-206ENST00000447872 A0A087WZG4 1122 aa13.9□□□□□ -0.18
VSTM1-206ENST00000447872 ZNF790Q6PG37 636 aa13.9□□□□□ -0.18
VSTM1-206ENST00000447872 IL17REQ8NFR9 667 aa13.9□□□□□ -0.18
VSTM1-206ENST00000447872 CFAP53Q96M91 514 aa13.9□□□□□ -0.18
VSTM1-206ENST00000447872 GTF3C3Q9Y5Q9 886 aa13.9□□□□□ -0.18
VSTM1-206ENST00000447872 COL15A1P39059 1388 aa13.9□□□□□ -0.18
VSTM1-206ENST00000447872 COL5A3P25940 1745 aaPredicted RBP13.9□□□□□ -0.18
VSTM1-206ENST00000447872 MRC1P22897 1456 aa13.89□□□□□ -0.19
VSTM1-206ENST00000447872 SERPINB2P05120 415 aa13.89□□□□□ -0.19
VSTM1-206ENST00000447872 HTRA3P83110 453 aa13.89□□□□□ -0.19
VSTM1-206ENST00000447872 ZNF496Q96IT1 587 aaPredicted RBP13.89□□□□□ -0.19
VSTM1-206ENST00000447872 NMRK2Q9NPI5 230 aa13.89□□□□□ -0.19
VSTM1-206ENST00000447872 RNF181Q9P0P0 153 aa13.89□□□□□ -0.19
VSTM1-206ENST00000447872 EIF5P55010 431 aaKnown RBP13.88□□□□□ -0.19
VSTM1-206ENST00000447872 C16orf71Q8IYS4 520 aaPredicted RBP13.88□□□□□ -0.19
VSTM1-206ENST00000447872 BCL2L12Q9HB09 334 aa13.88□□□□□ -0.19
VSTM1-206ENST00000447872 NUDCQ9Y266 331 aa13.88□□□□□ -0.19
VSTM1-206ENST00000447872 KCPQ6ZWJ8 1503 aa13.87□□□□□ -0.19
VSTM1-206ENST00000447872 HSPA1AP0DMV8 641 aaKnown RBP13.87□□□□□ -0.19
VSTM1-206ENST00000447872 HSPA1BP0DMV9 641 aaKnown RBP13.87□□□□□ -0.19
VSTM1-206ENST00000447872 DDX10Q13206 875 aaKnown RBP13.87□□□□□ -0.19
VSTM1-206ENST00000447872 FAM161AQ3B820 660 aa13.87□□□□□ -0.19
VSTM1-206ENST00000447872 BICDL1Q6ZP65 573 aa13.87□□□□□ -0.19
VSTM1-206ENST00000447872 NPM2Q86SE8 214 aaKnown RBP13.87□□□□□ -0.19
VSTM1-206ENST00000447872 FMNL2Q96PY5 1086 aa13.87□□□□□ -0.19
VSTM1-206ENST00000447872 MYH14Q7Z406 1995 aaKnown RBP13.87□□□□□ -0.19
VSTM1-206ENST00000447872 KDM2BQ8NHM5 1336 aa13.87□□□□□ -0.19
VSTM1-206ENST00000447872 KIF13BQ9NQT8 1826 aa13.86□□□□□ -0.19
VSTM1-206ENST00000447872 H0YIN7 160 aa13.86□□□□□ -0.19
VSTM1-206ENST00000447872 PRKAR2BP31323 418 aa13.86□□□□□ -0.19
VSTM1-206ENST00000447872 C2CD5Q86YS7 1000 aa13.86□□□□□ -0.19
VSTM1-206ENST00000447872 TTLL6Q8N841 843 aa13.86□□□□□ -0.19
VSTM1-206ENST00000447872 PHACTR3Q96KR7 559 aa13.86□□□□□ -0.19
VSTM1-206ENST00000447872 ZNF330Q9Y3S2 320 aaPredicted RBP13.86□□□□□ -0.19
VSTM1-206ENST00000447872 TJP1Q07157 1748 aa13.86□□□□□ -0.19
VSTM1-206ENST00000447872 HEG1Q9ULI3 1381 aa13.85□□□□□ -0.19
VSTM1-206ENST00000447872 BTBD11A6QL63 1104 aa13.85□□□□□ -0.19
VSTM1-206ENST00000447872 N4BP2Q86UW6 1770 aaPredicted RBP13.85□□□□□ -0.19
VSTM1-206ENST00000447872 SCN11AQ9UI33 1791 aa13.84□□□□□ -0.19
VSTM1-206ENST00000447872 A1BGP04217 495 aa13.84□□□□□ -0.19
VSTM1-206ENST00000447872 U2AF1L5P0DN76 240 aaPredicted RBP13.84□□□□□ -0.19
VSTM1-206ENST00000447872 IL6STP40189 918 aaPredicted RBP13.84□□□□□ -0.19
VSTM1-206ENST00000447872 U2AF1Q01081 240 aaKnown RBP eCLIP13.84□□□□□ -0.19
VSTM1-206ENST00000447872 RBM46Q8TBY0 533 aaKnown RBP13.84□□□□□ -0.19
VSTM1-206ENST00000447872 RSPH6AQ9H0K4 717 aa13.84□□□□□ -0.19
VSTM1-206ENST00000447872 TBC1D2BQ9UPU7 963 aa13.84□□□□□ -0.19
VSTM1-206ENST00000447872 COL3A1P02461 1466 aaPredicted RBP13.84□□□□□ -0.19
VSTM1-206ENST00000447872 KIAA1551Q9HCM1 1747 aa13.84□□□□□ -0.19
VSTM1-206ENST00000447872 LMNB1P20700 586 aa13.83□□□□□ -0.2
VSTM1-206ENST00000447872 PDE6BP35913 854 aa13.83□□□□□ -0.2
VSTM1-206ENST00000447872 TBC1D9BQ66K14 1250 aa13.83□□□□□ -0.2
VSTM1-206ENST00000447872 RTF1Q92541 710 aaKnown RBP13.83□□□□□ -0.2
VSTM1-206ENST00000447872 BRIP1Q9BX63 1249 aa13.83□□□□□ -0.2
VSTM1-206ENST00000447872 RRAGCQ9HB90 399 aa13.83□□□□□ -0.2
VSTM1-206ENST00000447872 PDZRN3Q9UPQ7 1066 aa13.83□□□□□ -0.2
VSTM1-206ENST00000447872 CEMIPQ8WUJ3 1361 aa13.83□□□□□ -0.2
VSTM1-206ENST00000447872 NPHP1O15259 732 aa13.82□□□□□ -0.2
VSTM1-206ENST00000447872 KCNQ3O43525 872 aa13.82□□□□□ -0.2
VSTM1-206ENST00000447872 FSTL1Q12841 308 aa13.82□□□□□ -0.2
VSTM1-206ENST00000447872 ZNF622Q969S3 477 aaKnown RBP eCLIP13.82□□□□□ -0.2
VSTM1-206ENST00000447872 SETDB2Q96T68 719 aa13.82□□□□□ -0.2
VSTM1-206ENST00000447872 PPP2R1AP30153 589 aa13.81□□□□□ -0.2
VSTM1-206ENST00000447872 RASSF7Q02833 373 aa13.81□□□□□ -0.2
VSTM1-206ENST00000447872 ZC3H4Q9UPT8 1303 aaKnown RBP13.81□□□□□ -0.2
VSTM1-206ENST00000447872 ADAMTS7Q9UKP4 1686 aa13.8□□□□□ -0.2
VSTM1-206ENST00000447872 SNRPA1P09661 255 aaKnown RBP13.8□□□□□ -0.2
VSTM1-206ENST00000447872 MCM10Q7L590 875 aa13.8□□□□□ -0.2
VSTM1-206ENST00000447872 CARMIL3Q8ND23 1372 aa13.8□□□□□ -0.2
VSTM1-206ENST00000447872 HTATSF1O43719 755 aaKnown RBP13.79□□□□□ -0.2
VSTM1-206ENST00000447872 CAMTA2O94983 1202 aa13.79□□□□□ -0.2
VSTM1-206ENST00000447872 PRR5LQ6MZQ0 368 aa13.79□□□□□ -0.2
VSTM1-206ENST00000447872 DZIP3Q86Y13 1208 aaKnown RBP13.79□□□□□ -0.2
VSTM1-206ENST00000447872 CCDC24Q8N4L8 307 aa13.79□□□□□ -0.2
VSTM1-206ENST00000447872 CNBD1Q8NA66 436 aa13.79□□□□□ -0.2
VSTM1-206ENST00000447872 USP16Q9Y5T5 823 aa13.79□□□□□ -0.2
VSTM1-206ENST00000447872 GLTPD2A6NH11 291 aa13.78□□□□□ -0.2
VSTM1-206ENST00000447872 VEGFAP15692 232 aaPredicted RBP13.78□□□□□ -0.2
VSTM1-206ENST00000447872 ST5P78524 1137 aa13.78□□□□□ -0.2
VSTM1-206ENST00000447872 NFKBIEO00221 500 aa13.77□□□□□ -0.21
VSTM1-206ENST00000447872 C21orf2O43822 256 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms