RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 HEG1Q9ULI3 1381 aa31.82■■■□□ 2.69
MRPL28-205ENST00000447696 MCM10Q7L590 875 aa31.82■■■□□ 2.68
MRPL28-205ENST00000447696 SOS1Q07889 1333 aaPredicted RBP31.81■■■□□ 2.68
MRPL28-205ENST00000447696 BTBD11A6QL63 1104 aa31.81■■■□□ 2.68
MRPL28-205ENST00000447696 GYS1P13807 737 aa31.81■■■□□ 2.68
MRPL28-205ENST00000447696 MMP10P09238 476 aa31.8■■■□□ 2.68
MRPL28-205ENST00000447696 FMNL2Q96PY5 1086 aa31.8■■■□□ 2.68
MRPL28-205ENST00000447696 TEX13AQ9BXU3 409 aaPredicted RBP31.8■■■□□ 2.68
MRPL28-205ENST00000447696 USP42Q9H9J4 1324 aaKnown RBP31.79■■■□□ 2.68
MRPL28-205ENST00000447696 MAPK8IP3Q9UPT6 1336 aa31.79■■■□□ 2.68
MRPL28-205ENST00000447696 STARD3NLO95772 234 aa31.79■■■□□ 2.68
MRPL28-205ENST00000447696 NFE2L2Q16236 605 aa31.78■■■□□ 2.68
MRPL28-205ENST00000447696 PRKRIP1Q9H875 184 aaPredicted RBP31.78■■■□□ 2.68
MRPL28-205ENST00000447696 ZBTB1Q9Y2K1 713 aa31.76■■■□□ 2.67
MRPL28-205ENST00000447696 DCTN1Q14203 1278 aa31.75■■■□□ 2.67
MRPL28-205ENST00000447696 COL15A1P39059 1388 aa31.74■■■□□ 2.67
MRPL28-205ENST00000447696 SRP68Q9UHB9 627 aaKnown RBP31.73■■■□□ 2.67
MRPL28-205ENST00000447696 DLG5Q8TDM6 1919 aa31.73■■■□□ 2.67
MRPL28-205ENST00000447696 KCNQ3O43525 872 aa31.72■■■□□ 2.67
MRPL28-205ENST00000447696 TAF7Q15545 349 aaPredicted RBP31.72■■■□□ 2.67
MRPL28-205ENST00000447696 ZPR1O75312 459 aa31.71■■■□□ 2.67
MRPL28-205ENST00000447696 ZNF526Q8TF50 670 aaPredicted RBP31.71■■■□□ 2.67
MRPL28-205ENST00000447696 FKBP8Q14318 412 aa31.69■■■□□ 2.66
MRPL28-205ENST00000447696 NARFQ9UHQ1 456 aa31.69■■■□□ 2.66
MRPL28-205ENST00000447696 PARP3Q9Y6F1 533 aa31.69■■■□□ 2.66
MRPL28-205ENST00000447696 C10orf71Q711Q0 1435 aa31.68■■■□□ 2.66
MRPL28-205ENST00000447696 CANXP27824 592 aaKnown RBP31.68■■■□□ 2.66
MRPL28-205ENST00000447696 EIF5P55010 431 aaKnown RBP31.68■■■□□ 2.66
MRPL28-205ENST00000447696 PNISRQ8TF01 805 aaKnown RBP31.68■■■□□ 2.66
MRPL28-205ENST00000447696 KIF13BQ9NQT8 1826 aa31.67■■■□□ 2.66
MRPL28-205ENST00000447696 A0A087WZG4 1122 aa31.66■■■□□ 2.66
MRPL28-205ENST00000447696 SNRPA1P09661 255 aaKnown RBP31.66■■■□□ 2.66
MRPL28-205ENST00000447696 WDR43Q15061 677 aaKnown RBP eCLIP31.66■■■□□ 2.66
MRPL28-205ENST00000447696 USPL1Q5W0Q7 1092 aa31.66■■■□□ 2.66
MRPL28-205ENST00000447696 IL6STP40189 918 aaPredicted RBP31.64■■■□□ 2.66
MRPL28-205ENST00000447696 ZNF316A6NFI3 1004 aaPredicted RBP31.63■■■□□ 2.65
MRPL28-205ENST00000447696 KIF3CO14782 793 aa31.62■■■□□ 2.65
MRPL28-205ENST00000447696 TM4SF1P30408 202 aa31.62■■■□□ 2.65
MRPL28-205ENST00000447696 DDR1Q08345 913 aa31.62■■■□□ 2.65
MRPL28-205ENST00000447696 KDM3BQ7LBC6 1761 aa31.61■■■□□ 2.65
MRPL28-205ENST00000447696 TGFB2P61812 414 aa31.61■■■□□ 2.65
MRPL28-205ENST00000447696 LMOD3Q0VAK6 560 aa31.61■■■□□ 2.65
MRPL28-205ENST00000447696 PXDNLA1KZ92 1463 aa31.6■■■□□ 2.65
MRPL28-205ENST00000447696 A1BGP04217 495 aa31.6■■■□□ 2.65
MRPL28-205ENST00000447696 TMPOP42166 694 aaKnown RBP31.6■■■□□ 2.65
MRPL28-205ENST00000447696 APLP1P51693 650 aa31.6■■■□□ 2.65
MRPL28-205ENST00000447696 RIPK4P57078 832 aa31.6■■■□□ 2.65
MRPL28-205ENST00000447696 THUMPD2Q9BTF0 503 aaKnown RBP31.6■■■□□ 2.65
MRPL28-205ENST00000447696 USP16Q9Y5T5 823 aa31.6■■■□□ 2.65
MRPL28-205ENST00000447696 POLRMTO00411 1230 aaKnown RBP31.59■■■□□ 2.65
MRPL28-205ENST00000447696 RUNDC1Q96C34 613 aa31.59■■■□□ 2.65
MRPL28-205ENST00000447696 BCL2L12Q9HB09 334 aa31.59■■■□□ 2.65
MRPL28-205ENST00000447696 MIS18AQ9NYP9 233 aa31.58■■■□□ 2.65
MRPL28-205ENST00000447696 KIAA1551Q9HCM1 1747 aa31.58■■■□□ 2.65
MRPL28-205ENST00000447696 PRAMEF22A3QJZ6 481 aa31.57■■■□□ 2.64
MRPL28-205ENST00000447696 NPM2Q86SE8 214 aaKnown RBP31.57■■■□□ 2.64
MRPL28-205ENST00000447696 ADAMTS8Q9UP79 889 aa31.57■■■□□ 2.64
MRPL28-205ENST00000447696 SCN7AQ01118 1682 aa31.57■■■□□ 2.64
MRPL28-205ENST00000447696 NFIXQ14938 502 aa31.56■■■□□ 2.64
MRPL28-205ENST00000447696 CCDC146Q8IYE0 955 aa31.56■■■□□ 2.64
MRPL28-205ENST00000447696 WWC3Q9ULE0 1092 aa31.55■■■□□ 2.64
MRPL28-205ENST00000447696 ZNF330Q9Y3S2 320 aaPredicted RBP31.55■■■□□ 2.64
MRPL28-205ENST00000447696 LAMB4A4D0S4 1761 aa31.54■■■□□ 2.64
MRPL28-205ENST00000447696 TOMM70O94826 608 aa31.54■■■□□ 2.64
MRPL28-205ENST00000447696 BABAM1Q9NWV8 329 aa31.54■■■□□ 2.64
MRPL28-205ENST00000447696 EIF4A1P60842 406 aaKnown RBP31.53■■■□□ 2.64
MRPL28-205ENST00000447696 TBC1D2BQ9UPU7 963 aa31.52■■■□□ 2.64
MRPL28-205ENST00000447696 NRXN2Q9P2S2 1712 aa31.51■■■□□ 2.63
MRPL28-205ENST00000447696 RRP7AQ9Y3A4 280 aaKnown RBP31.5■■■□□ 2.63
MRPL28-205ENST00000447696 N4BP2Q86UW6 1770 aaPredicted RBP31.49■■■□□ 2.63
MRPL28-205ENST00000447696 A0A0G2JLW4 131 aa31.49■■■□□ 2.63
MRPL28-205ENST00000447696 CAMTA2O94983 1202 aa31.49■■■□□ 2.63
MRPL28-205ENST00000447696 DPEP1P16444 411 aa31.49■■■□□ 2.63
MRPL28-205ENST00000447696 DZIP3Q86Y13 1208 aaKnown RBP31.49■■■□□ 2.63
MRPL28-205ENST00000447696 TSPYL4Q9UJ04 414 aa31.49■■■□□ 2.63
MRPL28-205ENST00000447696 NBPF26B4DH59 902 aa31.48■■■□□ 2.63
MRPL28-205ENST00000447696 NBPF10Q6P3W6 841 aaKnown RBP31.48■■■□□ 2.63
MRPL28-205ENST00000447696 NBPF15Q8N660 670 aa31.48■■■□□ 2.63
MRPL28-205ENST00000447696 BCORQ6W2J9 1755 aa31.48■■■□□ 2.63
MRPL28-205ENST00000447696 SERPINB2P05120 415 aa31.47■■■□□ 2.63
MRPL28-205ENST00000447696 RGL2O15211 777 aa31.46■■■□□ 2.63
MRPL28-205ENST00000447696 PIP4K2AP48426 406 aaPredicted RBP31.46■■■□□ 2.63
MRPL28-205ENST00000447696 NEUROD2Q15784 382 aa31.46■■■□□ 2.63
MRPL28-205ENST00000447696 BCS1LQ9Y276 419 aa31.46■■■□□ 2.63
MRPL28-205ENST00000447696 AFDNP55196 1824 aaKnown RBP31.46■■■□□ 2.63
MRPL28-205ENST00000447696 TBC1D9BQ66K14 1250 aa31.45■■■□□ 2.63
MRPL28-205ENST00000447696 TRIM35Q9UPQ4 493 aa31.45■■■□□ 2.63
MRPL28-205ENST00000447696 CARMIL3Q8ND23 1372 aa31.44■■■□□ 2.62
MRPL28-205ENST00000447696 BRCA1P38398 1863 aaKnown RBP31.44■■■□□ 2.62
MRPL28-205ENST00000447696 KCNA3P22001 575 aa31.43■■■□□ 2.62
MRPL28-205ENST00000447696 CLEC4GQ6UXB4 293 aa31.43■■■□□ 2.62
MRPL28-205ENST00000447696 BICDL1Q6ZP65 573 aa31.43■■■□□ 2.62
MRPL28-205ENST00000447696 DNAJC5GQ8N7S2 189 aa31.43■■■□□ 2.62
MRPL28-205ENST00000447696 ARHGAP27Q6ZUM4 889 aa31.42■■■□□ 2.62
MRPL28-205ENST00000447696 ZNF652Q9Y2D9 606 aa31.42■■■□□ 2.62
MRPL28-205ENST00000447696 PIM2Q9P1W9 311 aa31.41■■■□□ 2.62
MRPL28-205ENST00000447696 ERBB4Q15303 1308 aa31.41■■■□□ 2.62
MRPL28-205ENST00000447696 ANP32CO43423 234 aa31.4■■■□□ 2.62
MRPL28-205ENST00000447696 SETDB2Q96T68 719 aa31.4■■■□□ 2.62
MRPL28-205ENST00000447696 RBM46Q8TBY0 533 aaKnown RBP31.39■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 241 ms