RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 CABP1Q9NZU7 370 aa19.13■□□□□ 0.65
CNOT3-204ENST00000447684 PRAM1Q96QH2 718 aa19.13■□□□□ 0.65
CNOT3-204ENST00000447684 FAM200AQ8TCP9 573 aa19.12■□□□□ 0.65
CNOT3-204ENST00000447684 RTF1Q92541 710 aaKnown RBP19.12■□□□□ 0.65
CNOT3-204ENST00000447684 TIGD1Q96MW7 591 aa19.12■□□□□ 0.65
CNOT3-204ENST00000447684 IL25Q9H293 177 aa19.12■□□□□ 0.65
CNOT3-204ENST00000447684 OSBPL3Q9H4L5 887 aa19.12■□□□□ 0.65
CNOT3-204ENST00000447684 CPSF1Q10570 1443 aaKnown RBP19.12■□□□□ 0.65
CNOT3-204ENST00000447684 CPA1P15085 419 aa19.12■□□□□ 0.65
CNOT3-204ENST00000447684 MORC2Q9Y6X9 1032 aaPredicted RBP19.12■□□□□ 0.65
CNOT3-204ENST00000447684 IPO4Q8TEX9 1081 aaKnown RBP19.11■□□□□ 0.65
CNOT3-204ENST00000447684 ST7Q9NRC1 585 aa19.11■□□□□ 0.65
CNOT3-204ENST00000447684 IL13P35225 146 aa19.11■□□□□ 0.65
CNOT3-204ENST00000447684 AK2P54819 239 aa19.11■□□□□ 0.65
CNOT3-204ENST00000447684 LRRCC1Q9C099 1032 aa19.11■□□□□ 0.65
CNOT3-204ENST00000447684 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.11■□□□□ 0.65
CNOT3-204ENST00000447684 SLC4A2P04920 1241 aa19.1■□□□□ 0.65
CNOT3-204ENST00000447684 TYRO3Q06418 890 aa19.1■□□□□ 0.65
CNOT3-204ENST00000447684 MAP3K11Q16584 847 aa19.1■□□□□ 0.65
CNOT3-204ENST00000447684 CEP135Q66GS9 1140 aa19.1■□□□□ 0.65
CNOT3-204ENST00000447684 CCDC83Q8IWF9 413 aa19.1■□□□□ 0.65
CNOT3-204ENST00000447684 PAXBP1Q9Y5B6 917 aa19.1■□□□□ 0.65
CNOT3-204ENST00000447684 ZSCAN25Q6NSZ9 544 aa19.1■□□□□ 0.65
CNOT3-204ENST00000447684 CDK12Q9NYV4 1490 aaPredicted RBP19.09■□□□□ 0.65
CNOT3-204ENST00000447684 SYCP1Q15431 976 aa19.09■□□□□ 0.65
CNOT3-204ENST00000447684 KMT5BQ4FZB7 885 aa19.09■□□□□ 0.65
CNOT3-204ENST00000447684 NUP62CLQ9H1M0 184 aa19.09■□□□□ 0.65
CNOT3-204ENST00000447684 ANO6Q4KMQ2 910 aa19.09■□□□□ 0.65
CNOT3-204ENST00000447684 FERMT3Q86UX7 667 aa19.09■□□□□ 0.65
CNOT3-204ENST00000447684 CDK19Q9BWU1 502 aa19.09■□□□□ 0.65
CNOT3-204ENST00000447684 ZNF215Q9UL58 517 aaPredicted RBP19.09■□□□□ 0.65
CNOT3-204ENST00000447684 GJB2P29033 226 aa19.08■□□□□ 0.65
CNOT3-204ENST00000447684 LIMCH1Q9UPQ0 1083 aa19.08■□□□□ 0.64
CNOT3-204ENST00000447684 MRVI1Q9Y6F6 885 aa19.08■□□□□ 0.64
CNOT3-204ENST00000447684 ZNF397Q8NF99 534 aaPredicted RBP19.07■□□□□ 0.64
CNOT3-204ENST00000447684 CBX8Q9HC52 389 aa19.07■□□□□ 0.64
CNOT3-204ENST00000447684 IL1RAPL2Q9NP60 686 aa19.07■□□□□ 0.64
CNOT3-204ENST00000447684 CLIP2Q9UDT6 1046 aa19.07■□□□□ 0.64
CNOT3-204ENST00000447684 MLH3Q9UHC1 1453 aa19.07■□□□□ 0.64
CNOT3-204ENST00000447684 FAM173BQ6P4H8 233 aa19.07■□□□□ 0.64
CNOT3-204ENST00000447684 RUFY3Q7L099 469 aa19.07■□□□□ 0.64
CNOT3-204ENST00000447684 TUBGCP6Q96RT7 1819 aa19.07■□□□□ 0.64
CNOT3-204ENST00000447684 ATP7BP35670 1465 aa19.06■□□□□ 0.64
CNOT3-204ENST00000447684 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.06■□□□□ 0.64
CNOT3-204ENST00000447684 GOLGA6L4A6NEF3 574 aa19.06■□□□□ 0.64
CNOT3-204ENST00000447684 LIG1P18858 919 aa19.06■□□□□ 0.64
CNOT3-204ENST00000447684 HSPA4P34932 840 aa19.06■□□□□ 0.64
CNOT3-204ENST00000447684 HAP1P54257 671 aaPredicted RBP19.06■□□□□ 0.64
CNOT3-204ENST00000447684 ELF2Q15723 593 aa19.06■□□□□ 0.64
CNOT3-204ENST00000447684 MCM10Q7L590 875 aa19.06■□□□□ 0.64
CNOT3-204ENST00000447684 CACTINQ8WUQ7 758 aaKnown RBP19.06■□□□□ 0.64
CNOT3-204ENST00000447684 TNMDQ9H2S6 317 aa19.06■□□□□ 0.64
CNOT3-204ENST00000447684 LARGE1O95461 756 aa19.06■□□□□ 0.64
CNOT3-204ENST00000447684 DDX54Q8TDD1 881 aaKnown RBP19.06■□□□□ 0.64
CNOT3-204ENST00000447684 MIS18AQ9NYP9 233 aa19.06■□□□□ 0.64
CNOT3-204ENST00000447684 PTPRCP08575 1304 aa19.06■□□□□ 0.64
CNOT3-204ENST00000447684 POGZQ7Z3K3 1410 aa19.05■□□□□ 0.64
CNOT3-204ENST00000447684 CHMP4AQ9BY43 222 aa19.05■□□□□ 0.64
CNOT3-204ENST00000447684 TRMT1Q9NXH9 659 aaKnown RBP19.05■□□□□ 0.64
CNOT3-204ENST00000447684 GNAI2P04899 355 aa19.05■□□□□ 0.64
CNOT3-204ENST00000447684 ZNF75DP51815 510 aa19.05■□□□□ 0.64
CNOT3-204ENST00000447684 NUTM1Q86Y26 1132 aa19.05■□□□□ 0.64
CNOT3-204ENST00000447684 SNX14Q9Y5W7 946 aa19.05■□□□□ 0.64
CNOT3-204ENST00000447684 CASTP20810 708 aaKnown RBP19.04■□□□□ 0.64
CNOT3-204ENST00000447684 FBXO38Q6PIJ6 1188 aa19.04■□□□□ 0.64
CNOT3-204ENST00000447684 RASEFQ8IZ41 740 aa19.04■□□□□ 0.64
CNOT3-204ENST00000447684 MTMR6Q9Y217 621 aa19.04■□□□□ 0.64
CNOT3-204ENST00000447684 MYO5BQ9ULV0 1848 aa19.04■□□□□ 0.64
CNOT3-204ENST00000447684 RRS1Q15050 365 aaKnown RBP19.04■□□□□ 0.64
CNOT3-204ENST00000447684 G2E3Q7L622 706 aa19.04■□□□□ 0.64
CNOT3-204ENST00000447684 CALCOCO1Q9P1Z2 691 aa19.04■□□□□ 0.64
CNOT3-204ENST00000447684 USP27XA6NNY8 438 aa19.04■□□□□ 0.64
CNOT3-204ENST00000447684 IDI1Q13907 227 aa19.04■□□□□ 0.64
CNOT3-204ENST00000447684 IL17RAQ96F46 866 aa19.04■□□□□ 0.64
CNOT3-204ENST00000447684 DACT1Q9NYF0 836 aa19.04■□□□□ 0.64
CNOT3-204ENST00000447684 SSH2Q76I76 1423 aa19.03■□□□□ 0.64
CNOT3-204ENST00000447684 PNMA6EA0A0J9YXQ4 647 aa19.03■□□□□ 0.64
CNOT3-204ENST00000447684 ARID5BQ14865 1188 aa19.03■□□□□ 0.64
CNOT3-204ENST00000447684 CCDC144BQ3MJ40 725 aa19.03■□□□□ 0.64
CNOT3-204ENST00000447684 CCDC144CPQ8IYA2 1237 aa19.03■□□□□ 0.64
CNOT3-204ENST00000447684 PDIA4P13667 645 aaKnown RBP19.03■□□□□ 0.64
CNOT3-204ENST00000447684 PTPN14Q15678 1187 aa19.03■□□□□ 0.64
CNOT3-204ENST00000447684 SPG7Q9UQ90 795 aa19.03■□□□□ 0.64
CNOT3-204ENST00000447684 TTC6Q86TZ1 520 aa19.02■□□□□ 0.64
CNOT3-204ENST00000447684 ZRANB1Q9UGI0 708 aa19.02■□□□□ 0.64
CNOT3-204ENST00000447684 NECAB1Q8N987 351 aa19.02■□□□□ 0.63
CNOT3-204ENST00000447684 GTF3C6Q969F1 213 aa19.02■□□□□ 0.63
CNOT3-204ENST00000447684 DNAJC2Q99543 621 aaKnown RBP19.02■□□□□ 0.63
CNOT3-204ENST00000447684 DNAJC25Q9H1X3 360 aa19.02■□□□□ 0.63
CNOT3-204ENST00000447684 SALL3Q9BXA9 1300 aa19.02■□□□□ 0.63
CNOT3-204ENST00000447684 RAD50Q92878 1312 aa19.01■□□□□ 0.63
CNOT3-204ENST00000447684 KIAA0232Q92628 1395 aa19.01■□□□□ 0.63
CNOT3-204ENST00000447684 ZNF165P49910 485 aa19.01■□□□□ 0.63
CNOT3-204ENST00000447684 KRT85P78386 507 aa19.01■□□□□ 0.63
CNOT3-204ENST00000447684 TFIP11Q9UBB9 837 aaKnown RBP19.01■□□□□ 0.63
CNOT3-204ENST00000447684 AATKQ6ZMQ8 1374 aa19.01■□□□□ 0.63
CNOT3-204ENST00000447684 RBM6P78332 1123 aaKnown RBP19■□□□□ 0.63
CNOT3-204ENST00000447684 CWC27Q6UX04 472 aaKnown RBP19■□□□□ 0.63
CNOT3-204ENST00000447684 TTC14Q96N46 770 aa19■□□□□ 0.63
CNOT3-204ENST00000447684 TRIM34Q9BYJ4 488 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms