RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 DNAJC10Q8IXB1 793 aa7.4□□□□□ -1.23
PROM1-201ENST00000447510 COL22A1Q8NFW1 1626 aaPredicted RBP7.4□□□□□ -1.23
PROM1-201ENST00000447510 ABCC6O95255 1503 aa7.4□□□□□ -1.23
PROM1-201ENST00000447510 ANXA1P04083 346 aa7.39□□□□□ -1.23
PROM1-201ENST00000447510 GTF2E1P29083 439 aaPredicted RBP7.39□□□□□ -1.23
PROM1-201ENST00000447510 PIP4K2AP48426 406 aaPredicted RBP7.39□□□□□ -1.23
PROM1-201ENST00000447510 KIF6Q6ZMV9 814 aa7.39□□□□□ -1.23
PROM1-201ENST00000447510 TNS2Q63HR2 1409 aa7.39□□□□□ -1.23
PROM1-201ENST00000447510 LOC102724428A0A0B4J2F2 783 aa7.39□□□□□ -1.23
PROM1-201ENST00000447510 PHF14O94880 888 aa7.39□□□□□ -1.23
PROM1-201ENST00000447510 SIK1P57059 783 aa7.39□□□□□ -1.23
PROM1-201ENST00000447510 NKX1-1Q15270 411 aaPredicted RBP7.39□□□□□ -1.23
PROM1-201ENST00000447510 NCAPD2Q15021 1401 aa7.39□□□□□ -1.23
PROM1-201ENST00000447510 EIF4A1P60842 406 aaKnown RBP7.39□□□□□ -1.23
PROM1-201ENST00000447510 NEXNQ0ZGT2 675 aa7.39□□□□□ -1.23
PROM1-201ENST00000447510 TSPYL6Q8N831 410 aa7.39□□□□□ -1.23
PROM1-201ENST00000447510 FAM13BQ9NYF5 915 aa7.39□□□□□ -1.23
PROM1-201ENST00000447510 RGS17Q9UGC6 210 aaPredicted RBP7.39□□□□□ -1.23
PROM1-201ENST00000447510 ZKSCAN2Q63HK3 967 aa7.38□□□□□ -1.23
PROM1-201ENST00000447510 ATG3Q9NT62 314 aa7.38□□□□□ -1.23
PROM1-201ENST00000447510 DBF4Q9UBU7 674 aaPredicted RBP7.38□□□□□ -1.23
PROM1-201ENST00000447510 CT47B1P0C2W7 299 aaPredicted RBP7.38□□□□□ -1.23
PROM1-201ENST00000447510 PDE4CQ08493 712 aa7.38□□□□□ -1.23
PROM1-201ENST00000447510 BECN1Q14457 450 aa7.38□□□□□ -1.23
PROM1-201ENST00000447510 TFCP2L1Q9NZI6 479 aa7.38□□□□□ -1.23
PROM1-201ENST00000447510 RGPD5Q99666 1765 aa7.38□□□□□ -1.23
PROM1-201ENST00000447510 PALLDQ8WX93 1383 aa7.38□□□□□ -1.23
PROM1-201ENST00000447510 NBPF14Q5TI25 921 aa7.38□□□□□ -1.23
PROM1-201ENST00000447510 FAM177BA6PVY3 158 aa7.37□□□□□ -1.23
PROM1-201ENST00000447510 GNPATO15228 680 aa7.37□□□□□ -1.23
PROM1-201ENST00000447510 BCAR3O75815 825 aa7.37□□□□□ -1.23
PROM1-201ENST00000447510 FAM161AQ3B820 660 aa7.37□□□□□ -1.23
PROM1-201ENST00000447510 ITPRIPQ8IWB1 547 aa7.37□□□□□ -1.23
PROM1-201ENST00000447510 SSH1Q8WYL5 1049 aa7.37□□□□□ -1.23
PROM1-201ENST00000447510 API5Q9BZZ5 524 aaKnown RBP7.37□□□□□ -1.23
PROM1-201ENST00000447510 CHPF2Q9P2E5 772 aa7.37□□□□□ -1.23
PROM1-201ENST00000447510 ONECUT3O60422 494 aaPredicted RBP7.37□□□□□ -1.23
PROM1-201ENST00000447510 ZPR1O75312 459 aa7.37□□□□□ -1.23
PROM1-201ENST00000447510 A1BGP04217 495 aa7.37□□□□□ -1.23
PROM1-201ENST00000447510 EN1Q05925 392 aaPredicted RBP7.37□□□□□ -1.23
PROM1-201ENST00000447510 ZNF428Q96B54 188 aa7.37□□□□□ -1.23
PROM1-201ENST00000447510 RTCBQ9Y3I0 505 aaKnown RBP7.37□□□□□ -1.23
PROM1-201ENST00000447510 USP16Q9Y5T5 823 aa7.37□□□□□ -1.23
PROM1-201ENST00000447510 KIF16BQ96L93 1317 aa7.37□□□□□ -1.23
PROM1-201ENST00000447510 GIGYF1O75420 1035 aaPredicted RBP7.37□□□□□ -1.23
PROM1-201ENST00000447510 STK32BQ9NY57 414 aa7.37□□□□□ -1.23
PROM1-201ENST00000447510 RFC4P35249 363 aa7.36□□□□□ -1.23
PROM1-201ENST00000447510 BICDL1Q6ZP65 573 aa7.36□□□□□ -1.23
PROM1-201ENST00000447510 HYPKQ9NX55 129 aa7.36□□□□□ -1.23
PROM1-201ENST00000447510 ZHX1Q9UKY1 873 aaPredicted RBP7.36□□□□□ -1.23
PROM1-201ENST00000447510 VAMP4O75379 141 aa7.36□□□□□ -1.23
PROM1-201ENST00000447510 XRCC6P12956 609 aaKnown RBP eCLIP7.36□□□□□ -1.23
PROM1-201ENST00000447510 ZBTB3Q9H5J0 574 aa7.36□□□□□ -1.23
PROM1-201ENST00000447510 PRDM10Q9NQV6 1147 aa7.36□□□□□ -1.23
PROM1-201ENST00000447510 NOB1Q9ULX3 412 aaKnown RBP7.36□□□□□ -1.23
PROM1-201ENST00000447510 PLCH1Q4KWH8 1693 aa7.36□□□□□ -1.23
PROM1-201ENST00000447510 PRAMEF22A3QJZ6 481 aa7.36□□□□□ -1.23
PROM1-201ENST00000447510 CCDC87Q9NVE4 849 aa7.36□□□□□ -1.23
PROM1-201ENST00000447510 ZNF853P0CG23 659 aa7.35□□□□□ -1.23
PROM1-201ENST00000447510 RARSP54136 660 aaKnown RBP7.35□□□□□ -1.23
PROM1-201ENST00000447510 TXNRD1Q16881 649 aa7.35□□□□□ -1.23
PROM1-201ENST00000447510 COPS6Q7L5N1 327 aa7.35□□□□□ -1.23
PROM1-201ENST00000447510 DEFB132Q7Z7B7 95 aa7.35□□□□□ -1.23
PROM1-201ENST00000447510 KLHL34Q8N239 644 aa7.35□□□□□ -1.23
PROM1-201ENST00000447510 XAGE3Q8WTP9 111 aa7.35□□□□□ -1.23
PROM1-201ENST00000447510 TBC1D2BQ9UPU7 963 aa7.35□□□□□ -1.23
PROM1-201ENST00000447510 KDM6AO15550 1401 aaPredicted RBP7.35□□□□□ -1.23
PROM1-201ENST00000447510 PTF1AQ7RTS3 328 aa7.35□□□□□ -1.23
PROM1-201ENST00000447510 CHMP4BQ9H444 224 aaKnown RBP7.35□□□□□ -1.23
PROM1-201ENST00000447510 C9orf78Q9NZ63 289 aaPredicted RBP7.35□□□□□ -1.23
PROM1-201ENST00000447510 DISP2A7MBM2 1401 aa7.35□□□□□ -1.23
PROM1-201ENST00000447510 CEMIPQ8WUJ3 1361 aa7.35□□□□□ -1.23
PROM1-201ENST00000447510 USP54Q70EL1 1684 aa7.35□□□□□ -1.23
PROM1-201ENST00000447510 LMO7Q8WWI1 1683 aa7.35□□□□□ -1.23
PROM1-201ENST00000447510 ZNF521Q96K83 1311 aa7.35□□□□□ -1.23
PROM1-201ENST00000447510 HOXB7P09629 217 aa7.35□□□□□ -1.23
PROM1-201ENST00000447510 ALDH1L2Q3SY69 923 aa7.35□□□□□ -1.23
PROM1-201ENST00000447510 ABCA3Q99758 1704 aa7.35□□□□□ -1.23
PROM1-201ENST00000447510 HEG1Q9ULI3 1381 aa7.35□□□□□ -1.23
PROM1-201ENST00000447510 A0A087WZG4 1122 aa7.35□□□□□ -1.23
PROM1-201ENST00000447510 CLCN1P35523 988 aa7.35□□□□□ -1.23
PROM1-201ENST00000447510 FLIIQ13045 1269 aa7.35□□□□□ -1.23
PROM1-201ENST00000447510 AAMPQ13685 434 aa7.35□□□□□ -1.23
PROM1-201ENST00000447510 TRAPPC3LQ5T215 181 aa7.35□□□□□ -1.23
PROM1-201ENST00000447510 DZIP1LQ8IYY4 767 aaKnown RBP7.35□□□□□ -1.23
PROM1-201ENST00000447510 ZNF652Q9Y2D9 606 aa7.35□□□□□ -1.23
PROM1-201ENST00000447510 CHMP3Q9Y3E7 222 aa7.35□□□□□ -1.23
PROM1-201ENST00000447510 RGPD2P0DJD1 1756 aa7.34□□□□□ -1.23
PROM1-201ENST00000447510 COL18A1P39060 1754 aa7.34□□□□□ -1.23
PROM1-201ENST00000447510 MARF1Q9Y4F3 1742 aaKnown RBP7.34□□□□□ -1.23
PROM1-201ENST00000447510 ESPNB1AK53 854 aa7.34□□□□□ -1.23
PROM1-201ENST00000447510 CRKLP46109 303 aaKnown RBP7.34□□□□□ -1.23
PROM1-201ENST00000447510 DDX21Q9NR30 783 aaKnown RBP eCLIP7.34□□□□□ -1.23
PROM1-201ENST00000447510 PLEKHG2Q9H7P9 1386 aa7.34□□□□□ -1.23
PROM1-201ENST00000447510 DZIP3Q86Y13 1208 aaKnown RBP7.34□□□□□ -1.23
PROM1-201ENST00000447510 NWD2Q9ULI1 1742 aa7.34□□□□□ -1.23
PROM1-201ENST00000447510 ANKRD13DQ6ZTN6 518 aa7.34□□□□□ -1.24
PROM1-201ENST00000447510 KIAA1211Q6ZU35 1233 aa7.34□□□□□ -1.24
PROM1-201ENST00000447510 PANK1Q8TE04 598 aa7.34□□□□□ -1.24
PROM1-201ENST00000447510 UPF2Q9HAU5 1272 aaKnown RBP7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms