RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 SERTM1A2A2V5 107 aa7.6□□□□□ -1.19
HMGB1P16-201ENST00000447155 FKBP4Q02790 459 aaKnown RBP eCLIP7.6□□□□□ -1.19
HMGB1P16-201ENST00000447155 NAA30Q147X3 362 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P16-201ENST00000447155 GNASQ5JWF2 1037 aa7.6□□□□□ -1.19
HMGB1P16-201ENST00000447155 SLC27A3Q5K4L6 730 aa7.6□□□□□ -1.19
HMGB1P16-201ENST00000447155 RHBDD1Q8TEB9 315 aa7.6□□□□□ -1.19
HMGB1P16-201ENST00000447155 NIFKQ9BYG3 293 aaKnown RBP7.6□□□□□ -1.19
HMGB1P16-201ENST00000447155 CABP1Q9NZU7 370 aa7.6□□□□□ -1.19
HMGB1P16-201ENST00000447155 H3BRB1 525 aa7.59□□□□□ -1.19
HMGB1P16-201ENST00000447155 EML1O00423 815 aa7.59□□□□□ -1.19
HMGB1P16-201ENST00000447155 NOS2P35228 1153 aa7.59□□□□□ -1.19
HMGB1P16-201ENST00000447155 MRPL14Q6P1L8 145 aaKnown RBP7.59□□□□□ -1.19
HMGB1P16-201ENST00000447155 C16orf46Q6P387 395 aa7.59□□□□□ -1.19
HMGB1P16-201ENST00000447155 GLYCTKQ8IVS8 523 aa7.59□□□□□ -1.19
HMGB1P16-201ENST00000447155 ZDHHC1Q8WTX9 485 aa7.59□□□□□ -1.19
HMGB1P16-201ENST00000447155 TUT1Q9H6E5 874 aaKnown RBP7.59□□□□□ -1.19
HMGB1P16-201ENST00000447155 POLMQ9NP87 494 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P16-201ENST00000447155 ZNF232Q9UNY5 417 aa7.59□□□□□ -1.19
HMGB1P16-201ENST00000447155 DGAT1O75907 488 aa7.58□□□□□ -1.2
HMGB1P16-201ENST00000447155 BMP2P12643 396 aa7.58□□□□□ -1.2
HMGB1P16-201ENST00000447155 SMCPP49901 116 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P16-201ENST00000447155 SCARF1Q14162 830 aa7.58□□□□□ -1.2
HMGB1P16-201ENST00000447155 CTC1Q2NKJ3 1217 aa7.58□□□□□ -1.2
HMGB1P16-201ENST00000447155 FOXD4L5Q5VV16 416 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P16-201ENST00000447155 RGS22Q8NE09 1264 aa7.58□□□□□ -1.2
HMGB1P16-201ENST00000447155 L3MBTL2Q969R5 705 aa7.58□□□□□ -1.2
HMGB1P16-201ENST00000447155 MYO19Q96H55 970 aa7.58□□□□□ -1.2
HMGB1P16-201ENST00000447155 ANO2Q9NQ90 1003 aa7.58□□□□□ -1.2
HMGB1P16-201ENST00000447155 BIN2Q9UBW5 565 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P16-201ENST00000447155 SPATA31C2B4DYI2 1134 aa7.57□□□□□ -1.2
HMGB1P16-201ENST00000447155 NRG2O14511 850 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P16-201ENST00000447155 CTSOP43234 321 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P16-201ENST00000447155 C6orf118Q5T5N4 469 aa7.57□□□□□ -1.2
HMGB1P16-201ENST00000447155 FAM13AO94988 1023 aa7.56□□□□□ -1.2
HMGB1P16-201ENST00000447155 NPR3P17342 541 aa7.56□□□□□ -1.2
HMGB1P16-201ENST00000447155 MTMR3Q13615 1198 aa7.56□□□□□ -1.2
HMGB1P16-201ENST00000447155 PKDCCQ504Y2 493 aa7.56□□□□□ -1.2
HMGB1P16-201ENST00000447155 C4orf17Q53FE4 359 aa7.56□□□□□ -1.2
HMGB1P16-201ENST00000447155 COX20Q5RI15 118 aa7.56□□□□□ -1.2
HMGB1P16-201ENST00000447155 NGLY1Q96IV0 654 aa7.56□□□□□ -1.2
HMGB1P16-201ENST00000447155 SAP130Q9H0E3 1048 aa7.56□□□□□ -1.2
HMGB1P16-201ENST00000447155 QTRT2Q9H974 415 aaKnown RBP7.56□□□□□ -1.2
HMGB1P16-201ENST00000447155 PARP3Q9Y6F1 533 aa7.56□□□□□ -1.2
HMGB1P16-201ENST00000447155 RTN1Q16799 776 aa7.55□□□□□ -1.2
HMGB1P16-201ENST00000447155 SH3PXD2AQ5TCZ1 1133 aa7.55□□□□□ -1.2
HMGB1P16-201ENST00000447155 C1orf53Q5VUE5 145 aa7.55□□□□□ -1.2
HMGB1P16-201ENST00000447155 ALDH16A1Q8IZ83 802 aa7.55□□□□□ -1.2
HMGB1P16-201ENST00000447155 RNF217Q8TC41 542 aa7.55□□□□□ -1.2
HMGB1P16-201ENST00000447155 PHACTR1Q9C0D0 580 aa7.55□□□□□ -1.2
HMGB1P16-201ENST00000447155 HCN4Q9Y3Q4 1203 aa7.55□□□□□ -1.2
HMGB1P16-201ENST00000447155 TNFRSF10BO14763 440 aa7.54□□□□□ -1.2
HMGB1P16-201ENST00000447155 AXIN1O15169 862 aa7.54□□□□□ -1.2
HMGB1P16-201ENST00000447155 GFRA3O60609 400 aa7.54□□□□□ -1.2
HMGB1P16-201ENST00000447155 PLA2G4AP47712 749 aa7.54□□□□□ -1.2
HMGB1P16-201ENST00000447155 MARSP56192 900 aaKnown RBP7.54□□□□□ -1.2
HMGB1P16-201ENST00000447155 ECM1Q16610 540 aa7.54□□□□□ -1.2
HMGB1P16-201ENST00000447155 WDR44Q5JSH3 913 aa7.54□□□□□ -1.2
HMGB1P16-201ENST00000447155 CRIPAKQ8N1N5 446 aa7.54□□□□□ -1.2
HMGB1P16-201ENST00000447155 STIM2Q9P246 746 aa7.54□□□□□ -1.2
HMGB1P16-201ENST00000447155 TTLL8A6PVC2 850 aa7.53□□□□□ -1.2
HMGB1P16-201ENST00000447155 BMP1P13497 986 aa7.53□□□□□ -1.2
HMGB1P16-201ENST00000447155 ARHGAP4P98171 946 aa7.53□□□□□ -1.2
HMGB1P16-201ENST00000447155 LAPTM4AQ15012 233 aa7.53□□□□□ -1.2
HMGB1P16-201ENST00000447155 NBPF1Q3BBV0 1214 aa7.53□□□□□ -1.2
HMGB1P16-201ENST00000447155 NBPF10Q6P3W6 841 aaKnown RBP7.53□□□□□ -1.2
HMGB1P16-201ENST00000447155 LYSMD3Q7Z3D4 306 aa7.53□□□□□ -1.2
HMGB1P16-201ENST00000447155 TRIM46Q7Z4K8 759 aa7.53□□□□□ -1.2
HMGB1P16-201ENST00000447155 ZDHHC3Q9NYG2 299 aa7.53□□□□□ -1.2
HMGB1P16-201ENST00000447155 LRFN2Q9ULH4 789 aa7.53□□□□□ -1.2
HMGB1P16-201ENST00000447155 SOS2Q07890 1332 aaPredicted RBP7.52□□□□□ -1.2
HMGB1P16-201ENST00000447155 ERCC3P19447 782 aa7.52□□□□□ -1.21
HMGB1P16-201ENST00000447155 MPSTP25325 297 aa7.52□□□□□ -1.21
HMGB1P16-201ENST00000447155 BRD2P25440 801 aaKnown RBP7.52□□□□□ -1.21
HMGB1P16-201ENST00000447155 TXLNAP40222 546 aa7.52□□□□□ -1.21
HMGB1P16-201ENST00000447155 PHKA2P46019 1235 aa7.52□□□□□ -1.21
HMGB1P16-201ENST00000447155 POU4F2Q12837 409 aa7.52□□□□□ -1.21
HMGB1P16-201ENST00000447155 PRICKLE2Q7Z3G6 844 aa7.52□□□□□ -1.21
HMGB1P16-201ENST00000447155 ABTB2Q8N961 1025 aa7.52□□□□□ -1.21
HMGB1P16-201ENST00000447155 C11orf91Q3C1V1 193 aa7.51□□□□□ -1.21
HMGB1P16-201ENST00000447155 ALKBH2Q6NS38 261 aa7.51□□□□□ -1.21
HMGB1P16-201ENST00000447155 AIDAQ96BJ3 306 aa7.51□□□□□ -1.21
HMGB1P16-201ENST00000447155 GPC6Q9Y625 555 aaPredicted RBP7.51□□□□□ -1.21
HMGB1P16-201ENST00000447155 TATP17735 454 aaPredicted RBP7.5□□□□□ -1.21
HMGB1P16-201ENST00000447155 DGKZQ13574 1117 aa7.5□□□□□ -1.21
HMGB1P16-201ENST00000447155 HIF1AQ16665 826 aa7.5□□□□□ -1.21
HMGB1P16-201ENST00000447155 NOM1Q5C9Z4 860 aaKnown RBP7.5□□□□□ -1.21
HMGB1P16-201ENST00000447155 DNAJC14Q6Y2X3 702 aaPredicted RBP7.5□□□□□ -1.21
HMGB1P16-201ENST00000447155 ZFP42Q96MM3 310 aa7.5□□□□□ -1.21
HMGB1P16-201ENST00000447155 DCTN4Q9UJW0 460 aa7.5□□□□□ -1.21
HMGB1P16-201ENST00000447155 MAPK1P28482 360 aa7.49□□□□□ -1.21
HMGB1P16-201ENST00000447155 EIF1AXP47813 144 aaKnown RBP7.49□□□□□ -1.21
HMGB1P16-201ENST00000447155 RHPN1Q8TCX5 695 aa7.49□□□□□ -1.21
HMGB1P16-201ENST00000447155 KLK14Q9P0G3 267 aa7.49□□□□□ -1.21
HMGB1P16-201ENST00000447155 A0A1B0GTH6 734 aa7.48□□□□□ -1.21
HMGB1P16-201ENST00000447155 FIGNL2A6NMB9 653 aa7.48□□□□□ -1.21
HMGB1P16-201ENST00000447155 RHOQP17081 205 aa7.48□□□□□ -1.21
HMGB1P16-201ENST00000447155 ZSCAN29Q8IWY8 852 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P16-201ENST00000447155 C7orf43Q8WVR3 580 aa7.48□□□□□ -1.21
HMGB1P16-201ENST00000447155 FOXD4L4Q8WXT5 416 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P16-201ENST00000447155 IFT43Q96FT9 208 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 792.8 ms