RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 ZBTB40Q9NUA8 1239 aa13.56□□□□□ -0.24
PTCH2-203ENST00000447098 GLI2P10070 1586 aa13.56□□□□□ -0.24
PTCH2-203ENST00000447098 SYCE3A1L190 88 aa13.56□□□□□ -0.24
PTCH2-203ENST00000447098 GOLGA6L4A6NEF3 574 aa13.56□□□□□ -0.24
PTCH2-203ENST00000447098 KCNQ3O43525 872 aa13.56□□□□□ -0.24
PTCH2-203ENST00000447098 CCDC57Q2TAC2 916 aa13.56□□□□□ -0.24
PTCH2-203ENST00000447098 RBM27Q9P2N5 1060 aaKnown RBP13.56□□□□□ -0.24
PTCH2-203ENST00000447098 USP6P35125 1406 aa13.55□□□□□ -0.24
PTCH2-203ENST00000447098 SNRPA1P09661 255 aaKnown RBP13.55□□□□□ -0.24
PTCH2-203ENST00000447098 MPNDQ8N594 471 aa13.55□□□□□ -0.24
PTCH2-203ENST00000447098 RUFY2Q8WXA3 655 aa13.55□□□□□ -0.24
PTCH2-203ENST00000447098 PPP1R9BQ96SB3 815 aa13.55□□□□□ -0.24
PTCH2-203ENST00000447098 RNMTO43148 476 aaKnown RBP13.55□□□□□ -0.24
PTCH2-203ENST00000447098 DDB1Q16531 1140 aa13.55□□□□□ -0.24
PTCH2-203ENST00000447098 CWF19L2Q2TBE0 894 aaKnown RBP13.55□□□□□ -0.24
PTCH2-203ENST00000447098 PRDM10Q9NQV6 1147 aa13.55□□□□□ -0.24
PTCH2-203ENST00000447098 HYPKQ9NX55 129 aa13.54□□□□□ -0.24
PTCH2-203ENST00000447098 TULP1O00294 542 aaPredicted RBP13.54□□□□□ -0.24
PTCH2-203ENST00000447098 CHAF1AQ13111 956 aaPredicted RBP13.54□□□□□ -0.24
PTCH2-203ENST00000447098 CCDC8Q9H0W5 538 aaPredicted RBP13.54□□□□□ -0.24
PTCH2-203ENST00000447098 CWC22Q9HCG8 908 aaKnown RBP13.54□□□□□ -0.24
PTCH2-203ENST00000447098 CD2BP2O95400 341 aaKnown RBP13.54□□□□□ -0.24
PTCH2-203ENST00000447098 PRIM1P49642 420 aaKnown RBP13.54□□□□□ -0.24
PTCH2-203ENST00000447098 IL17REQ8NFR9 667 aa13.54□□□□□ -0.24
PTCH2-203ENST00000447098 PODXL2Q9NZ53 605 aa13.54□□□□□ -0.24
PTCH2-203ENST00000447098 LMTK2Q8IWU2 1503 aa13.53□□□□□ -0.24
PTCH2-203ENST00000447098 PPP1R42Q7Z4L9 355 aa13.53□□□□□ -0.24
PTCH2-203ENST00000447098 PTPRCP08575 1304 aa13.53□□□□□ -0.24
PTCH2-203ENST00000447098 ZKSCAN1P17029 563 aaPredicted RBP13.53□□□□□ -0.24
PTCH2-203ENST00000447098 GNL2Q13823 731 aaKnown RBP13.53□□□□□ -0.24
PTCH2-203ENST00000447098 ANKRD13DQ6ZTN6 518 aa13.53□□□□□ -0.24
PTCH2-203ENST00000447098 CNTROBQ8N137 903 aa13.53□□□□□ -0.24
PTCH2-203ENST00000447098 PPP1R1BQ9UD71 204 aaPredicted RBP13.53□□□□□ -0.24
PTCH2-203ENST00000447098 FKBP4Q02790 459 aaKnown RBP eCLIP13.53□□□□□ -0.24
PTCH2-203ENST00000447098 PHF14O94880 888 aa13.52□□□□□ -0.24
PTCH2-203ENST00000447098 RBSNQ9H1K0 784 aa13.52□□□□□ -0.24
PTCH2-203ENST00000447098 CHL1O00533 1208 aa13.52□□□□□ -0.25
PTCH2-203ENST00000447098 PLEKHF1Q96S99 279 aa13.52□□□□□ -0.25
PTCH2-203ENST00000447098 MPHOSPH8Q99549 860 aa13.52□□□□□ -0.25
PTCH2-203ENST00000447098 FAM135BQ49AJ0 1406 aa13.52□□□□□ -0.25
PTCH2-203ENST00000447098 KIAA0232Q92628 1395 aa13.52□□□□□ -0.25
PTCH2-203ENST00000447098 A0A0U1RQG5 324 aaPredicted RBP13.52□□□□□ -0.25
PTCH2-203ENST00000447098 MBD3O95983 291 aa13.52□□□□□ -0.25
PTCH2-203ENST00000447098 FOSBP53539 338 aa13.52□□□□□ -0.25
PTCH2-203ENST00000447098 SASS6Q6UVJ0 657 aa13.52□□□□□ -0.25
PTCH2-203ENST00000447098 STK11IPQ8N1F8 1099 aa13.52□□□□□ -0.25
PTCH2-203ENST00000447098 ZKSCAN5Q9Y2L8 839 aa13.52□□□□□ -0.25
PTCH2-203ENST00000447098 PIK3R4Q99570 1358 aa13.52□□□□□ -0.25
PTCH2-203ENST00000447098 LAMC1P11047 1609 aa13.51□□□□□ -0.25
PTCH2-203ENST00000447098 HS1BP3Q53T59 392 aa13.51□□□□□ -0.25
PTCH2-203ENST00000447098 TRMT112Q9UI30 125 aaKnown RBP13.51□□□□□ -0.25
PTCH2-203ENST00000447098 NOL7Q9UMY1 257 aaKnown RBP13.51□□□□□ -0.25
PTCH2-203ENST00000447098 FRMPD1Q5SYB0 1578 aa13.51□□□□□ -0.25
PTCH2-203ENST00000447098 CWC27Q6UX04 472 aaKnown RBP13.51□□□□□ -0.25
PTCH2-203ENST00000447098 C16orf71Q8IYS4 520 aaPredicted RBP13.51□□□□□ -0.25
PTCH2-203ENST00000447098 BOLA2Q9H3K6 86 aa13.51□□□□□ -0.25
PTCH2-203ENST00000447098 TBC1D2BQ9UPU7 963 aa13.51□□□□□ -0.25
PTCH2-203ENST00000447098 DYNC1I1O14576 645 aa13.51□□□□□ -0.25
PTCH2-203ENST00000447098 ZRSR1Q15695 479 aaKnown RBP13.51□□□□□ -0.25
PTCH2-203ENST00000447098 CEP126Q9P2H0 1117 aa13.51□□□□□ -0.25
PTCH2-203ENST00000447098 NEK4P51957 841 aa13.5□□□□□ -0.25
PTCH2-203ENST00000447098 TSPY26PQ9H489 355 aa13.5□□□□□ -0.25
PTCH2-203ENST00000447098 ARHGEF25Q86VW2 580 aa13.5□□□□□ -0.25
PTCH2-203ENST00000447098 DCAF5Q96JK2 942 aa13.5□□□□□ -0.25
PTCH2-203ENST00000447098 ZNF445P59923 1031 aa13.5□□□□□ -0.25
PTCH2-203ENST00000447098 KDM4AO75164 1064 aa13.49□□□□□ -0.25
PTCH2-203ENST00000447098 ZNF790Q6PG37 636 aa13.49□□□□□ -0.25
PTCH2-203ENST00000447098 ERC1Q8IUD2 1116 aa13.49□□□□□ -0.25
PTCH2-203ENST00000447098 PA2G4Q9UQ80 394 aaKnown RBP13.49□□□□□ -0.25
PTCH2-203ENST00000447098 ATP7BP35670 1465 aa13.49□□□□□ -0.25
PTCH2-203ENST00000447098 HTATSF1O43719 755 aaKnown RBP13.49□□□□□ -0.25
PTCH2-203ENST00000447098 TERF1P54274 439 aa13.49□□□□□ -0.25
PTCH2-203ENST00000447098 FAM98CQ17RN3 349 aaKnown RBP13.49□□□□□ -0.25
PTCH2-203ENST00000447098 ZNF496Q96IT1 587 aaPredicted RBP13.49□□□□□ -0.25
PTCH2-203ENST00000447098 MX1P20591 662 aa13.49□□□□□ -0.25
PTCH2-203ENST00000447098 KIF1BPQ96EK5 621 aa13.48□□□□□ -0.25
PTCH2-203ENST00000447098 ZHX1Q9UKY1 873 aaPredicted RBP13.48□□□□□ -0.25
PTCH2-203ENST00000447098 A1BGP04217 495 aa13.48□□□□□ -0.25
PTCH2-203ENST00000447098 MCM5P33992 734 aa13.48□□□□□ -0.25
PTCH2-203ENST00000447098 BRINP3Q76B58 766 aa13.48□□□□□ -0.25
PTCH2-203ENST00000447098 NEXMIFQ5QGS0 1516 aa13.48□□□□□ -0.25
PTCH2-203ENST00000447098 PIK3C2BO00750 1634 aa13.48□□□□□ -0.25
PTCH2-203ENST00000447098 ATP6V1AP38606 617 aa13.48□□□□□ -0.25
PTCH2-203ENST00000447098 ARHGAP45Q92619 1136 aa13.48□□□□□ -0.25
PTCH2-203ENST00000447098 LRSAM1Q6UWE0 723 aa13.47□□□□□ -0.25
PTCH2-203ENST00000447098 TTC39AQ5SRH9 613 aa13.47□□□□□ -0.25
PTCH2-203ENST00000447098 AXIN2Q9Y2T1 843 aa13.47□□□□□ -0.25
PTCH2-203ENST00000447098 RAD21O60216 631 aa13.47□□□□□ -0.25
PTCH2-203ENST00000447098 ZGPATQ8N5A5 531 aaKnown RBP13.47□□□□□ -0.25
PTCH2-203ENST00000447098 LMBRD1Q9NUN5 540 aa13.47□□□□□ -0.25
PTCH2-203ENST00000447098 ARHGEF40Q8TER5 1519 aa13.47□□□□□ -0.25
PTCH2-203ENST00000447098 VIRMAQ69YN4 1812 aaKnown RBP13.47□□□□□ -0.25
PTCH2-203ENST00000447098 METTL24Q5JXM2 366 aa13.47□□□□□ -0.25
PTCH2-203ENST00000447098 TULP4Q9NRJ4 1543 aa13.47□□□□□ -0.25
PTCH2-203ENST00000447098 MTMR7Q9Y216 660 aa13.46□□□□□ -0.25
PTCH2-203ENST00000447098 FAM182BQ5T319 152 aa13.46□□□□□ -0.25
PTCH2-203ENST00000447098 SNRKQ9NRH2 765 aa13.46□□□□□ -0.25
PTCH2-203ENST00000447098 HMGN5P82970 282 aaKnown RBP13.46□□□□□ -0.26
PTCH2-203ENST00000447098 CCDC158Q5M9N0 1113 aa13.46□□□□□ -0.26
PTCH2-203ENST00000447098 KSR2Q6VAB6 950 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms