RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 LINC00116Q8NCU8 138 aa10.21□□□□□ -0.77
HDAC9-216ENST00000446646 SMC1BQ8NDV3 1235 aa10.21□□□□□ -0.77
HDAC9-216ENST00000446646 ZCRB1Q8TBF4 217 aaKnown RBP10.21□□□□□ -0.77
HDAC9-216ENST00000446646 AK7Q96M32 723 aa10.21□□□□□ -0.77
HDAC9-216ENST00000446646 C4BP0C0L5 1744 aa10.2□□□□□ -0.78
HDAC9-216ENST00000446646 USP31Q70CQ4 1352 aa10.2□□□□□ -0.78
HDAC9-216ENST00000446646 KTN1Q86UP2 1357 aaKnown RBP10.2□□□□□ -0.78
HDAC9-216ENST00000446646 FLAD1Q8NFF5 587 aa10.2□□□□□ -0.78
HDAC9-216ENST00000446646 RNF181Q9P0P0 153 aa10.2□□□□□ -0.78
HDAC9-216ENST00000446646 MKRN1Q9UHC7 482 aaKnown RBP10.2□□□□□ -0.78
HDAC9-216ENST00000446646 TAF1LQ8IZX4 1826 aa10.19□□□□□ -0.78
HDAC9-216ENST00000446646 FAM208AQ9UK61 1670 aaKnown RBP10.19□□□□□ -0.78
HDAC9-216ENST00000446646 C10orf71Q711Q0 1435 aa10.19□□□□□ -0.78
HDAC9-216ENST00000446646 SBNO2Q9Y2G9 1366 aa10.19□□□□□ -0.78
HDAC9-216ENST00000446646 MPRIPQ6WCQ1 1025 aa10.19□□□□□ -0.78
HDAC9-216ENST00000446646 USHBP1Q8N6Y0 703 aa10.19□□□□□ -0.78
HDAC9-216ENST00000446646 SPRYD3Q8NCJ5 442 aa10.19□□□□□ -0.78
HDAC9-216ENST00000446646 UBR3Q6ZT12 1888 aa10.19□□□□□ -0.78
HDAC9-216ENST00000446646 LTN1O94822 1766 aa10.19□□□□□ -0.78
HDAC9-216ENST00000446646 IP6K1Q92551 441 aa10.18□□□□□ -0.78
HDAC9-216ENST00000446646 CD163L1Q9NR16 1453 aa10.17□□□□□ -0.78
HDAC9-216ENST00000446646 PDE4DIPQ5VU43 2346 aa10.17□□□□□ -0.78
HDAC9-216ENST00000446646 PLEKHG2Q9H7P9 1386 aa10.17□□□□□ -0.78
HDAC9-216ENST00000446646 KDM2BQ8NHM5 1336 aa10.17□□□□□ -0.78
HDAC9-216ENST00000446646 TGFB2P61812 414 aa10.17□□□□□ -0.78
HDAC9-216ENST00000446646 ITPK1Q13572 414 aa10.17□□□□□ -0.78
HDAC9-216ENST00000446646 ABHD8Q96I13 439 aa10.17□□□□□ -0.78
HDAC9-216ENST00000446646 KIF13BQ9NQT8 1826 aa10.17□□□□□ -0.78
HDAC9-216ENST00000446646 PKD1L3Q7Z443 1732 aa10.16□□□□□ -0.78
HDAC9-216ENST00000446646 POTECB2RU33 542 aa10.16□□□□□ -0.78
HDAC9-216ENST00000446646 SSFA2P28290 1259 aa10.16□□□□□ -0.78
HDAC9-216ENST00000446646 RASSF7Q02833 373 aa10.16□□□□□ -0.78
HDAC9-216ENST00000446646 TMEM92Q6UXU6 159 aa10.16□□□□□ -0.78
HDAC9-216ENST00000446646 DCAF5Q96JK2 942 aa10.16□□□□□ -0.78
HDAC9-216ENST00000446646 STAC3Q96MF2 364 aa10.16□□□□□ -0.78
HDAC9-216ENST00000446646 RGPD2P0DJD1 1756 aa10.16□□□□□ -0.78
HDAC9-216ENST00000446646 RAB3GAP2Q9H2M9 1393 aa10.15□□□□□ -0.78
HDAC9-216ENST00000446646 EVC2Q86UK5 1308 aa10.15□□□□□ -0.78
HDAC9-216ENST00000446646 GNPATO15228 680 aa10.15□□□□□ -0.78
HDAC9-216ENST00000446646 NBPF6Q5VWK0 638 aa10.15□□□□□ -0.78
HDAC9-216ENST00000446646 VSIG10Q8N0Z9 540 aa10.15□□□□□ -0.78
HDAC9-216ENST00000446646 PIGBQ92521 554 aa10.15□□□□□ -0.78
HDAC9-216ENST00000446646 NBPF4Q96M43 638 aa10.15□□□□□ -0.78
HDAC9-216ENST00000446646 PRDM10Q9NQV6 1147 aa10.15□□□□□ -0.78
HDAC9-216ENST00000446646 NSD3Q9BZ95 1437 aa10.15□□□□□ -0.79
HDAC9-216ENST00000446646 BRCA1P38398 1863 aaKnown RBP10.15□□□□□ -0.79
HDAC9-216ENST00000446646 MAP3K19Q56UN5 1328 aa10.14□□□□□ -0.79
HDAC9-216ENST00000446646 CYP27B1O15528 508 aa10.14□□□□□ -0.79
HDAC9-216ENST00000446646 CHRNA5P30532 468 aa10.14□□□□□ -0.79
HDAC9-216ENST00000446646 LBX1P52954 281 aa10.14□□□□□ -0.79
HDAC9-216ENST00000446646 MARVELD3Q96A59 401 aa10.14□□□□□ -0.79
HDAC9-216ENST00000446646 KIAA1210Q9ULL0 1709 aa10.13□□□□□ -0.79
HDAC9-216ENST00000446646 LOC102724428A0A0B4J2F2 783 aa10.13□□□□□ -0.79
HDAC9-216ENST00000446646 HOXC9P31274 260 aa10.13□□□□□ -0.79
HDAC9-216ENST00000446646 SIK1P57059 783 aa10.13□□□□□ -0.79
HDAC9-216ENST00000446646 MON2Q7Z3U7 1717 aa10.13□□□□□ -0.79
HDAC9-216ENST00000446646 TNRC6CQ9HCJ0 1690 aaKnown RBP10.12□□□□□ -0.79
HDAC9-216ENST00000446646 MAP2P11137 1827 aaKnown RBP10.12□□□□□ -0.79
HDAC9-216ENST00000446646 DALRD3Q5D0E6 543 aaKnown RBP10.12□□□□□ -0.79
HDAC9-216ENST00000446646 ASAP1Q9ULH1 1129 aa10.12□□□□□ -0.79
HDAC9-216ENST00000446646 PPP1R37O75864 691 aa10.11□□□□□ -0.79
HDAC9-216ENST00000446646 GYS1P13807 737 aa10.11□□□□□ -0.79
HDAC9-216ENST00000446646 HOXB3P14651 431 aaPredicted RBP10.11□□□□□ -0.79
HDAC9-216ENST00000446646 VEGFAP15692 232 aaPredicted RBP10.11□□□□□ -0.79
HDAC9-216ENST00000446646 MLLT1Q03111 559 aaPredicted RBP10.11□□□□□ -0.79
HDAC9-216ENST00000446646 DOK7Q18PE1 504 aa10.11□□□□□ -0.79
HDAC9-216ENST00000446646 ZNF710Q8N1W2 664 aa10.11□□□□□ -0.79
HDAC9-216ENST00000446646 SLC4A9Q96Q91 983 aa10.11□□□□□ -0.79
HDAC9-216ENST00000446646 SLC12A5Q9H2X9 1139 aa10.11□□□□□ -0.79
HDAC9-216ENST00000446646 PIM2Q9P1W9 311 aa10.11□□□□□ -0.79
HDAC9-216ENST00000446646 KDM6AO15550 1401 aaPredicted RBP10.1□□□□□ -0.79
HDAC9-216ENST00000446646 GLTPD2A6NH11 291 aa10.1□□□□□ -0.79
HDAC9-216ENST00000446646 CCDC85CA6NKD9 419 aa10.1□□□□□ -0.79
HDAC9-216ENST00000446646 HSPA8P11142 646 aaKnown RBP10.1□□□□□ -0.79
HDAC9-216ENST00000446646 CTCFP49711 727 aaPredicted RBP10.1□□□□□ -0.79
HDAC9-216ENST00000446646 VEGFBP49765 207 aa10.1□□□□□ -0.79
HDAC9-216ENST00000446646 TMF1P82094 1093 aa10.1□□□□□ -0.79
HDAC9-216ENST00000446646 DDR1Q08345 913 aa10.1□□□□□ -0.79
HDAC9-216ENST00000446646 TSHZ2Q9NRE2 1034 aa10.1□□□□□ -0.79
HDAC9-216ENST00000446646 CCDC87Q9NVE4 849 aa10.1□□□□□ -0.79
HDAC9-216ENST00000446646 SBF1O95248 1867 aa10.1□□□□□ -0.79
HDAC9-216ENST00000446646 CNTNAP1P78357 1384 aa10.1□□□□□ -0.79
HDAC9-216ENST00000446646 RGS19P49795 217 aa10.09□□□□□ -0.79
HDAC9-216ENST00000446646 EMP3P54852 163 aa10.09□□□□□ -0.79
HDAC9-216ENST00000446646 RRS1Q15050 365 aaKnown RBP10.09□□□□□ -0.79
HDAC9-216ENST00000446646 NKX1-1Q15270 411 aaPredicted RBP10.09□□□□□ -0.79
HDAC9-216ENST00000446646 ARHGEF1Q92888 912 aaKnown RBP10.09□□□□□ -0.79
HDAC9-216ENST00000446646 WBP1LQ9NX94 342 aa10.09□□□□□ -0.79
HDAC9-216ENST00000446646 C4AP0C0L4 1744 aa10.09□□□□□ -0.79
HDAC9-216ENST00000446646 ARFGEF1Q9Y6D6 1849 aa10.09□□□□□ -0.79
HDAC9-216ENST00000446646 RIMBP2O15034 1052 aa10.08□□□□□ -0.8
HDAC9-216ENST00000446646 ATP6V1AP38606 617 aa10.08□□□□□ -0.8
HDAC9-216ENST00000446646 SMARCC1Q92922 1105 aaPredicted RBP10.08□□□□□ -0.8
HDAC9-216ENST00000446646 PLSCR2Q9NRY7 297 aa10.08□□□□□ -0.8
HDAC9-216ENST00000446646 SRP68Q9UHB9 627 aaKnown RBP10.08□□□□□ -0.8
HDAC9-216ENST00000446646 PCDH11XQ9BZA7 1347 aa10.07□□□□□ -0.8
HDAC9-216ENST00000446646 PCDH11YQ9BZA8 1340 aa10.07□□□□□ -0.8
HDAC9-216ENST00000446646 ITGB4P16144 1822 aa10.07□□□□□ -0.8
HDAC9-216ENST00000446646 A0A1W2PP64 1363 aa10.07□□□□□ -0.8
HDAC9-216ENST00000446646 AMPHP49418 695 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms