RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 SBF2Q86WG5 1849 aa9.75□□□□□ -0.85
SF3A3P1-201ENST00000446317 VAMP4O75379 141 aa9.74□□□□□ -0.85
SF3A3P1-201ENST00000446317 GIGYF1O75420 1035 aaPredicted RBP9.74□□□□□ -0.85
SF3A3P1-201ENST00000446317 PHF14O94880 888 aa9.74□□□□□ -0.85
SF3A3P1-201ENST00000446317 AIMP1Q12904 312 aaKnown RBP9.74□□□□□ -0.85
SF3A3P1-201ENST00000446317 G2E3Q7L622 706 aa9.74□□□□□ -0.85
SF3A3P1-201ENST00000446317 LRRC4BQ9NT99 713 aa9.74□□□□□ -0.85
SF3A3P1-201ENST00000446317 CHPF2Q9P2E5 772 aa9.74□□□□□ -0.85
SF3A3P1-201ENST00000446317 PLEKHG2Q9H7P9 1386 aa9.74□□□□□ -0.85
SF3A3P1-201ENST00000446317 HEG1Q9ULI3 1381 aa9.74□□□□□ -0.85
SF3A3P1-201ENST00000446317 SOCS7O14512 581 aa9.73□□□□□ -0.85
SF3A3P1-201ENST00000446317 SF3B2Q13435 895 aaKnown RBP9.73□□□□□ -0.85
SF3A3P1-201ENST00000446317 SSH1Q8WYL5 1049 aa9.73□□□□□ -0.85
SF3A3P1-201ENST00000446317 SMC4Q9NTJ3 1288 aa9.73□□□□□ -0.85
SF3A3P1-201ENST00000446317 RCAN3Q9UKA8 241 aa9.73□□□□□ -0.85
SF3A3P1-201ENST00000446317 SUPT16HQ9Y5B9 1047 aaKnown RBP9.73□□□□□ -0.85
SF3A3P1-201ENST00000446317 CENPBP07199 599 aaPredicted RBP9.72□□□□□ -0.85
SF3A3P1-201ENST00000446317 SNRPA1P09661 255 aaKnown RBP9.72□□□□□ -0.85
SF3A3P1-201ENST00000446317 TXNRD1Q16881 649 aa9.72□□□□□ -0.85
SF3A3P1-201ENST00000446317 AMIGO3Q86WK7 504 aa9.72□□□□□ -0.85
SF3A3P1-201ENST00000446317 PROM2Q8N271 834 aa9.72□□□□□ -0.85
SF3A3P1-201ENST00000446317 SMARCC1Q92922 1105 aaPredicted RBP9.72□□□□□ -0.85
SF3A3P1-201ENST00000446317 PHAXQ9H814 394 aaKnown RBP9.72□□□□□ -0.85
SF3A3P1-201ENST00000446317 TNS1Q9HBL0 1735 aaKnown RBP9.72□□□□□ -0.85
SF3A3P1-201ENST00000446317 TJP1Q07157 1748 aa9.72□□□□□ -0.85
SF3A3P1-201ENST00000446317 RARSP54136 660 aaKnown RBP9.72□□□□□ -0.85
SF3A3P1-201ENST00000446317 ZBTB1Q9Y2K1 713 aa9.72□□□□□ -0.85
SF3A3P1-201ENST00000446317 NBPF26B4DH59 902 aa9.71□□□□□ -0.86
SF3A3P1-201ENST00000446317 SLC4A2P04920 1241 aa9.71□□□□□ -0.86
SF3A3P1-201ENST00000446317 CYP19A1P11511 503 aaPredicted RBP9.71□□□□□ -0.86
SF3A3P1-201ENST00000446317 CRKLP46109 303 aaKnown RBP9.71□□□□□ -0.86
SF3A3P1-201ENST00000446317 NBPF14Q5TI25 921 aa9.71□□□□□ -0.86
SF3A3P1-201ENST00000446317 NBPF10Q6P3W6 841 aaKnown RBP9.71□□□□□ -0.86
SF3A3P1-201ENST00000446317 NBPF15Q8N660 670 aa9.71□□□□□ -0.86
SF3A3P1-201ENST00000446317 UPF1Q92900 1129 aaKnown RBP eCLIP9.71□□□□□ -0.86
SF3A3P1-201ENST00000446317 CLUAP1Q96AJ1 413 aa9.71□□□□□ -0.86
SF3A3P1-201ENST00000446317 UBR2Q8IWV8 1755 aa9.7□□□□□ -0.86
SF3A3P1-201ENST00000446317 GNPATO15228 680 aa9.7□□□□□ -0.86
SF3A3P1-201ENST00000446317 ZNF827Q17R98 1081 aa9.7□□□□□ -0.86
SF3A3P1-201ENST00000446317 C20orf194Q5TEA3 1177 aa9.7□□□□□ -0.86
SF3A3P1-201ENST00000446317 TTLL7Q6ZT98 887 aa9.7□□□□□ -0.86
SF3A3P1-201ENST00000446317 MRPL50Q8N5N7 158 aaKnown RBP9.7□□□□□ -0.86
SF3A3P1-201ENST00000446317 BABAM1Q9NWV8 329 aa9.7□□□□□ -0.86
SF3A3P1-201ENST00000446317 NOB1Q9ULX3 412 aaKnown RBP9.7□□□□□ -0.86
SF3A3P1-201ENST00000446317 F6X3S4 739 aa9.69□□□□□ -0.86
SF3A3P1-201ENST00000446317 BAG6P46379 1132 aa9.69□□□□□ -0.86
SF3A3P1-201ENST00000446317 CCDC30Q5VVM6 783 aa9.69□□□□□ -0.86
SF3A3P1-201ENST00000446317 INTS5Q6P9B9 1019 aaKnown RBP9.69□□□□□ -0.86
SF3A3P1-201ENST00000446317 XAGE3Q8WTP9 111 aa9.69□□□□□ -0.86
SF3A3P1-201ENST00000446317 STK31Q9BXU1 1019 aa9.69□□□□□ -0.86
SF3A3P1-201ENST00000446317 ZBTB3Q9H5J0 574 aa9.69□□□□□ -0.86
SF3A3P1-201ENST00000446317 ANO8Q9HCE9 1232 aaPredicted RBP9.69□□□□□ -0.86
SF3A3P1-201ENST00000446317 CCDC87Q9NVE4 849 aa9.69□□□□□ -0.86
SF3A3P1-201ENST00000446317 TBC1D2BQ9UPU7 963 aa9.69□□□□□ -0.86
SF3A3P1-201ENST00000446317 STARD3NLO95772 234 aa9.68□□□□□ -0.86
SF3A3P1-201ENST00000446317 PDIA6Q15084 440 aa9.68□□□□□ -0.86
SF3A3P1-201ENST00000446317 AK7Q96M32 723 aa9.68□□□□□ -0.86
SF3A3P1-201ENST00000446317 CAMKK2Q96RR4 588 aa9.68□□□□□ -0.86
SF3A3P1-201ENST00000446317 SRP68Q9UHB9 627 aaKnown RBP9.68□□□□□ -0.86
SF3A3P1-201ENST00000446317 FAM177BA6PVY3 158 aa9.67□□□□□ -0.86
SF3A3P1-201ENST00000446317 FKBP5Q13451 457 aaPredicted RBP9.67□□□□□ -0.86
SF3A3P1-201ENST00000446317 SLC4A10Q6U841 1118 aa9.67□□□□□ -0.86
SF3A3P1-201ENST00000446317 COPS6Q7L5N1 327 aa9.67□□□□□ -0.86
SF3A3P1-201ENST00000446317 PANK1Q8TE04 598 aa9.67□□□□□ -0.86
SF3A3P1-201ENST00000446317 JARID2Q92833 1246 aaPredicted RBP9.67□□□□□ -0.86
SF3A3P1-201ENST00000446317 PDGFDQ9GZP0 370 aaPredicted RBP9.67□□□□□ -0.86
SF3A3P1-201ENST00000446317 PSDA5PKW4 1024 aaPredicted RBP9.66□□□□□ -0.86
SF3A3P1-201ENST00000446317 MSL1Q68DK7 614 aa9.66□□□□□ -0.86
SF3A3P1-201ENST00000446317 BICDL1Q6ZP65 573 aa9.66□□□□□ -0.86
SF3A3P1-201ENST00000446317 TFCP2L1Q9NZI6 479 aa9.66□□□□□ -0.86
SF3A3P1-201ENST00000446317 LAMB4A4D0S4 1761 aa9.66□□□□□ -0.86
SF3A3P1-201ENST00000446317 LY75O60449 1722 aa9.66□□□□□ -0.86
SF3A3P1-201ENST00000446317 PLSCR1O15162 318 aa9.66□□□□□ -0.86
SF3A3P1-201ENST00000446317 RRP1P56182 461 aaKnown RBP9.66□□□□□ -0.86
SF3A3P1-201ENST00000446317 FLIIQ13045 1269 aa9.66□□□□□ -0.86
SF3A3P1-201ENST00000446317 VSIG10Q8N0Z9 540 aa9.66□□□□□ -0.86
SF3A3P1-201ENST00000446317 DDX21Q9NR30 783 aaKnown RBP eCLIP9.66□□□□□ -0.86
SF3A3P1-201ENST00000446317 DBF4Q9UBU7 674 aaPredicted RBP9.66□□□□□ -0.86
SF3A3P1-201ENST00000446317 C4BP0C0L5 1744 aa9.65□□□□□ -0.86
SF3A3P1-201ENST00000446317 ATP5J2-PTCD1G3V325 749 aa9.65□□□□□ -0.87
SF3A3P1-201ENST00000446317 RLBP1P12271 317 aa9.65□□□□□ -0.87
SF3A3P1-201ENST00000446317 GPTP24298 496 aa9.65□□□□□ -0.87
SF3A3P1-201ENST00000446317 HLFQ16534 295 aa9.65□□□□□ -0.87
SF3A3P1-201ENST00000446317 RTL5Q5HYW3 569 aaPredicted RBP9.65□□□□□ -0.87
SF3A3P1-201ENST00000446317 RIC3Q7Z5B4 369 aa9.65□□□□□ -0.87
SF3A3P1-201ENST00000446317 COL5A3P25940 1745 aaPredicted RBP9.64□□□□□ -0.87
SF3A3P1-201ENST00000446317 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.64□□□□□ -0.87
SF3A3P1-201ENST00000446317 PI4KAP2A4QPH2 592 aa9.64□□□□□ -0.87
SF3A3P1-201ENST00000446317 HOXB7P09629 217 aa9.64□□□□□ -0.87
SF3A3P1-201ENST00000446317 SLC27A3Q5K4L6 730 aa9.64□□□□□ -0.87
SF3A3P1-201ENST00000446317 USPL1Q5W0Q7 1092 aa9.64□□□□□ -0.87
SF3A3P1-201ENST00000446317 LRP10Q7Z4F1 713 aa9.64□□□□□ -0.87
SF3A3P1-201ENST00000446317 NPM2Q86SE8 214 aaKnown RBP9.64□□□□□ -0.87
SF3A3P1-201ENST00000446317 DZIP3Q86Y13 1208 aaKnown RBP9.64□□□□□ -0.87
SF3A3P1-201ENST00000446317 CCDC24Q8N4L8 307 aa9.64□□□□□ -0.87
SF3A3P1-201ENST00000446317 PI4KAP1Q8N8J0 262 aa9.64□□□□□ -0.87
SF3A3P1-201ENST00000446317 MYD88Q99836 296 aa9.64□□□□□ -0.87
SF3A3P1-201ENST00000446317 TEX13AQ9BXU3 409 aaPredicted RBP9.64□□□□□ -0.87
SF3A3P1-201ENST00000446317 MAP3K2Q9Y2U5 619 aa9.64□□□□□ -0.87
SF3A3P1-201ENST00000446317 RTCBQ9Y3I0 505 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms