RNA–Protein interactions for RNA: ENST00000446008.5

UBE2D4-206, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2 BASIC

Gene UBE2D4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-206ENST00000446008 RTCBQ9Y3I0 505 aaKnown RBP13.78□□□□□ -0.2
UBE2D4-206ENST00000446008 EMILIN1Q9Y6C2 1016 aa13.78□□□□□ -0.2
UBE2D4-206ENST00000446008 FCHSD2O94868 740 aa13.77□□□□□ -0.21
UBE2D4-206ENST00000446008 PHKG2P15735 406 aa13.77□□□□□ -0.21
UBE2D4-206ENST00000446008 DPEP1P16444 411 aa13.77□□□□□ -0.21
UBE2D4-206ENST00000446008 FSTL1Q12841 308 aa13.77□□□□□ -0.21
UBE2D4-206ENST00000446008 WASHC2AQ641Q2 1341 aa13.77□□□□□ -0.21
UBE2D4-206ENST00000446008 CCDC87Q9NVE4 849 aa13.77□□□□□ -0.21
UBE2D4-206ENST00000446008 C4AP0C0L4 1744 aa13.76□□□□□ -0.21
UBE2D4-206ENST00000446008 ANKRD26Q9UPS8 1709 aa13.76□□□□□ -0.21
UBE2D4-206ENST00000446008 KDRP35968 1356 aa13.76□□□□□ -0.21
UBE2D4-206ENST00000446008 GYS1P13807 737 aa13.76□□□□□ -0.21
UBE2D4-206ENST00000446008 KCNA3P22001 575 aa13.76□□□□□ -0.21
UBE2D4-206ENST00000446008 ARHGEF1Q92888 912 aaKnown RBP13.76□□□□□ -0.21
UBE2D4-206ENST00000446008 EYA1Q99502 592 aa13.76□□□□□ -0.21
UBE2D4-206ENST00000446008 PCDHB8Q9UN66 801 aa13.76□□□□□ -0.21
UBE2D4-206ENST00000446008 TRPC6Q9Y210 931 aa13.76□□□□□ -0.21
UBE2D4-206ENST00000446008 PLEKHG2Q9H7P9 1386 aa13.75□□□□□ -0.21
UBE2D4-206ENST00000446008 COL13A1Q5TAT6 717 aaPredicted RBP13.75□□□□□ -0.21
UBE2D4-206ENST00000446008 C9orf131Q5VYM1 1079 aa13.75□□□□□ -0.21
UBE2D4-206ENST00000446008 ZNF467Q7Z7K2 595 aaPredicted RBP13.75□□□□□ -0.21
UBE2D4-206ENST00000446008 C16orf71Q8IYS4 520 aaPredicted RBP13.75□□□□□ -0.21
UBE2D4-206ENST00000446008 SLC4A9Q96Q91 983 aa13.75□□□□□ -0.21
UBE2D4-206ENST00000446008 COL5A3P25940 1745 aaPredicted RBP13.75□□□□□ -0.21
UBE2D4-206ENST00000446008 MYH14Q7Z406 1995 aaKnown RBP13.74□□□□□ -0.21
UBE2D4-206ENST00000446008 RPS6KA4O75676 772 aa13.74□□□□□ -0.21
UBE2D4-206ENST00000446008 CDCA8Q53HL2 280 aa13.74□□□□□ -0.21
UBE2D4-206ENST00000446008 CARD14Q9BXL6 1004 aa13.74□□□□□ -0.21
UBE2D4-206ENST00000446008 PARP3Q9Y6F1 533 aa13.74□□□□□ -0.21
UBE2D4-206ENST00000446008 SBF1O95248 1867 aa13.74□□□□□ -0.21
UBE2D4-206ENST00000446008 CNTNAP4Q9C0A0 1308 aa13.73□□□□□ -0.21
UBE2D4-206ENST00000446008 ERVV-2B6SEH9 535 aa13.73□□□□□ -0.21
UBE2D4-206ENST00000446008 POTEIP0CG38 1075 aa13.73□□□□□ -0.21
UBE2D4-206ENST00000446008 RFC4P35249 363 aa13.73□□□□□ -0.21
UBE2D4-206ENST00000446008 PIM2Q9P1W9 311 aa13.73□□□□□ -0.21
UBE2D4-206ENST00000446008 KDM2BQ8NHM5 1336 aa13.72□□□□□ -0.21
UBE2D4-206ENST00000446008 PPM1GO15355 546 aaPredicted RBP13.72□□□□□ -0.21
UBE2D4-206ENST00000446008 ECM2O94769 699 aaPredicted RBP13.72□□□□□ -0.21
UBE2D4-206ENST00000446008 HTRA3P83110 453 aa13.72□□□□□ -0.21
UBE2D4-206ENST00000446008 DCAF5Q96JK2 942 aa13.72□□□□□ -0.21
UBE2D4-206ENST00000446008 KCPQ6ZWJ8 1503 aa13.7□□□□□ -0.22
UBE2D4-206ENST00000446008 TNRC6CQ9HCJ0 1690 aaKnown RBP13.7□□□□□ -0.22
UBE2D4-206ENST00000446008 TIE1P35590 1138 aa13.7□□□□□ -0.22
UBE2D4-206ENST00000446008 DALRD3Q5D0E6 543 aaKnown RBP13.7□□□□□ -0.22
UBE2D4-206ENST00000446008 RRAGCQ9HB90 399 aa13.7□□□□□ -0.22
UBE2D4-206ENST00000446008 POLKQ9UBT6 870 aa13.7□□□□□ -0.22
UBE2D4-206ENST00000446008 HSP90AB1P08238 724 aaKnown RBP13.69□□□□□ -0.22
UBE2D4-206ENST00000446008 RNF181Q9P0P0 153 aa13.69□□□□□ -0.22
UBE2D4-206ENST00000446008 PRELPP51888 382 aa13.68□□□□□ -0.22
UBE2D4-206ENST00000446008 EIF4A2Q14240 407 aaKnown RBP13.68□□□□□ -0.22
UBE2D4-206ENST00000446008 TNS4Q8IZW8 715 aa13.68□□□□□ -0.22
UBE2D4-206ENST00000446008 BMP2KQ9NSY1 1161 aaPredicted RBP13.68□□□□□ -0.22
UBE2D4-206ENST00000446008 ATMINO43313 823 aaPredicted RBP13.67□□□□□ -0.22
UBE2D4-206ENST00000446008 ASTLQ6HA08 431 aaPredicted RBP13.67□□□□□ -0.22
UBE2D4-206ENST00000446008 SMC1BQ8NDV3 1235 aa13.67□□□□□ -0.22
UBE2D4-206ENST00000446008 USP42Q9H9J4 1324 aaKnown RBP13.66□□□□□ -0.22
UBE2D4-206ENST00000446008 ZC3H4Q9UPT8 1303 aaKnown RBP13.66□□□□□ -0.22
UBE2D4-206ENST00000446008 DDR1Q08345 913 aa13.66□□□□□ -0.22
UBE2D4-206ENST00000446008 TM4SF1P30408 202 aa13.65□□□□□ -0.22
UBE2D4-206ENST00000446008 CRKLP46109 303 aaKnown RBP13.65□□□□□ -0.22
UBE2D4-206ENST00000446008 CABP4P57796 275 aa13.65□□□□□ -0.22
UBE2D4-206ENST00000446008 PLEKHO1Q53GL0 409 aaPredicted RBP13.65□□□□□ -0.22
UBE2D4-206ENST00000446008 SRP68Q9UHB9 627 aaKnown RBP13.65□□□□□ -0.22
UBE2D4-206ENST00000446008 KDM6AO15550 1401 aaPredicted RBP13.64□□□□□ -0.23
UBE2D4-206ENST00000446008 TTLL13PA6NNM8 815 aa13.64□□□□□ -0.23
UBE2D4-206ENST00000446008 POLRMTO00411 1230 aaKnown RBP13.64□□□□□ -0.23
UBE2D4-206ENST00000446008 CHRNA5P30532 468 aa13.64□□□□□ -0.23
UBE2D4-206ENST00000446008 AMOTQ4VCS5 1084 aa13.64□□□□□ -0.23
UBE2D4-206ENST00000446008 TMEM106CQ9BVX2 250 aa13.64□□□□□ -0.23
UBE2D4-206ENST00000446008 ADAMTS7Q9UKP4 1686 aa13.63□□□□□ -0.23
UBE2D4-206ENST00000446008 GLTPD2A6NH11 291 aa13.63□□□□□ -0.23
UBE2D4-206ENST00000446008 PTCD1O75127 700 aaKnown RBP13.63□□□□□ -0.23
UBE2D4-206ENST00000446008 VEGFAP15692 232 aaPredicted RBP13.63□□□□□ -0.23
UBE2D4-206ENST00000446008 ATN1P54259 1190 aaPredicted RBP13.63□□□□□ -0.23
UBE2D4-206ENST00000446008 RNF25Q96BH1 459 aaPredicted RBP13.63□□□□□ -0.23
UBE2D4-206ENST00000446008 CCDC88AQ3V6T2 1871 aa13.63□□□□□ -0.23
UBE2D4-206ENST00000446008 RIOK3O14730 519 aaKnown RBP13.62□□□□□ -0.23
UBE2D4-206ENST00000446008 ZNF530Q6P9A1 599 aaPredicted RBP13.62□□□□□ -0.23
UBE2D4-206ENST00000446008 AFDNP55196 1824 aaKnown RBP13.62□□□□□ -0.23
UBE2D4-206ENST00000446008 TJP1Q07157 1748 aa13.61□□□□□ -0.23
UBE2D4-206ENST00000446008 HSPA1AP0DMV8 641 aaKnown RBP13.61□□□□□ -0.23
UBE2D4-206ENST00000446008 HSPA1BP0DMV9 641 aaKnown RBP13.61□□□□□ -0.23
UBE2D4-206ENST00000446008 LMNB1P20700 586 aa13.61□□□□□ -0.23
UBE2D4-206ENST00000446008 PSEN1P49768 467 aa13.61□□□□□ -0.23
UBE2D4-206ENST00000446008 MTHFSP49914 203 aa13.61□□□□□ -0.23
UBE2D4-206ENST00000446008 PDAP1Q13442 181 aaKnown RBP13.61□□□□□ -0.23
UBE2D4-206ENST00000446008 INTS5Q6P9B9 1019 aaKnown RBP13.61□□□□□ -0.23
UBE2D4-206ENST00000446008 NFATC2IPQ8NCF5 419 aa13.61□□□□□ -0.23
UBE2D4-206ENST00000446008 RASSF7Q02833 373 aa13.6□□□□□ -0.23
UBE2D4-206ENST00000446008 NRXN2Q9P2S2 1712 aa13.6□□□□□ -0.23
UBE2D4-206ENST00000446008 DLEC1Q9Y238 1755 aa13.59□□□□□ -0.23
UBE2D4-206ENST00000446008 ZPR1O75312 459 aa13.59□□□□□ -0.23
UBE2D4-206ENST00000446008 C1orf141Q5JVX7 400 aa13.59□□□□□ -0.23
UBE2D4-206ENST00000446008 SCN11AQ9UI33 1791 aa13.58□□□□□ -0.23
UBE2D4-206ENST00000446008 USPL1Q5W0Q7 1092 aa13.58□□□□□ -0.24
UBE2D4-206ENST00000446008 POTECB2RU33 542 aa13.57□□□□□ -0.24
UBE2D4-206ENST00000446008 RGL2O15211 777 aa13.57□□□□□ -0.24
UBE2D4-206ENST00000446008 TNNT2P45379 298 aaPredicted RBP13.57□□□□□ -0.24
UBE2D4-206ENST00000446008 TTLL6Q8N841 843 aa13.57□□□□□ -0.24
UBE2D4-206ENST00000446008 NARFQ9UHQ1 456 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms