RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 CHPF2Q9P2E5 772 aa22.33■■□□□ 1.16
SGCE-206ENST00000445866 DBF4Q9UBU7 674 aaPredicted RBP22.33■■□□□ 1.16
SGCE-206ENST00000445866 BCAR3O75815 825 aa22.32■■□□□ 1.16
SGCE-206ENST00000445866 CANXP27824 592 aaKnown RBP22.32■■□□□ 1.16
SGCE-206ENST00000445866 CRKLP46109 303 aaKnown RBP22.32■■□□□ 1.16
SGCE-206ENST00000445866 PIP4K2AP48426 406 aaPredicted RBP22.32■■□□□ 1.16
SGCE-206ENST00000445866 ANXA1P04083 346 aa22.31■■□□□ 1.16
SGCE-206ENST00000445866 MYL6BP14649 208 aa22.31■■□□□ 1.16
SGCE-206ENST00000445866 DDX21Q9NR30 783 aaKnown RBP eCLIP22.31■■□□□ 1.16
SGCE-206ENST00000445866 CCDC87Q9NVE4 849 aa22.31■■□□□ 1.16
SGCE-206ENST00000445866 NHSQ6T4R5 1651 aa22.31■■□□□ 1.16
SGCE-206ENST00000445866 PDIA6Q15084 440 aa22.3■■□□□ 1.16
SGCE-206ENST00000445866 INTS5Q6P9B9 1019 aaKnown RBP22.3■■□□□ 1.16
SGCE-206ENST00000445866 MRPL50Q8N5N7 158 aaKnown RBP22.3■■□□□ 1.16
SGCE-206ENST00000445866 NBPF26B4DH59 902 aa22.3■■□□□ 1.16
SGCE-206ENST00000445866 RC3H1Q5TC82 1133 aaKnown RBP22.3■■□□□ 1.16
SGCE-206ENST00000445866 NBPF14Q5TI25 921 aa22.3■■□□□ 1.16
SGCE-206ENST00000445866 NBPF10Q6P3W6 841 aaKnown RBP22.3■■□□□ 1.16
SGCE-206ENST00000445866 NBPF15Q8N660 670 aa22.3■■□□□ 1.16
SGCE-206ENST00000445866 PROSER3Q2NL68 480 aa22.29■■□□□ 1.16
SGCE-206ENST00000445866 HYPKQ9NX55 129 aa22.29■■□□□ 1.16
SGCE-206ENST00000445866 ZBTB1Q9Y2K1 713 aa22.28■■□□□ 1.16
SGCE-206ENST00000445866 ZNF330Q9Y3S2 320 aaPredicted RBP22.28■■□□□ 1.16
SGCE-206ENST00000445866 SIPA1L3O60292 1781 aaPredicted RBP22.28■■□□□ 1.16
SGCE-206ENST00000445866 ERBB4Q15303 1308 aa22.27■■□□□ 1.16
SGCE-206ENST00000445866 NPM2Q86SE8 214 aaKnown RBP22.27■■□□□ 1.16
SGCE-206ENST00000445866 ITGB4P16144 1822 aa22.27■■□□□ 1.16
SGCE-206ENST00000445866 AK7Q96M32 723 aa22.26■■□□□ 1.15
SGCE-206ENST00000445866 ARXQ96QS3 562 aa22.26■■□□□ 1.15
SGCE-206ENST00000445866 G2E3Q7L622 706 aa22.26■■□□□ 1.15
SGCE-206ENST00000445866 PHAXQ9H814 394 aaKnown RBP22.26■■□□□ 1.15
SGCE-206ENST00000445866 AIMP1Q12904 312 aaKnown RBP22.25■■□□□ 1.15
SGCE-206ENST00000445866 FRAT1Q92837 279 aaPredicted RBP22.25■■□□□ 1.15
SGCE-206ENST00000445866 NOB1Q9ULX3 412 aaKnown RBP22.25■■□□□ 1.15
SGCE-206ENST00000445866 CNTNAP4Q9C0A0 1308 aa22.25■■□□□ 1.15
SGCE-206ENST00000445866 KDM3BQ7LBC6 1761 aa22.24■■□□□ 1.15
SGCE-206ENST00000445866 GNPATO15228 680 aa22.24■■□□□ 1.15
SGCE-206ENST00000445866 IL6STP40189 918 aaPredicted RBP22.24■■□□□ 1.15
SGCE-206ENST00000445866 BRPF1P55201 1214 aaPredicted RBP22.24■■□□□ 1.15
SGCE-206ENST00000445866 COPS6Q7L5N1 327 aa22.24■■□□□ 1.15
SGCE-206ENST00000445866 RPS6KA4O75676 772 aa22.23■■□□□ 1.15
SGCE-206ENST00000445866 XAGE3Q8WTP9 111 aa22.23■■□□□ 1.15
SGCE-206ENST00000445866 RTCBQ9Y3I0 505 aaKnown RBP22.23■■□□□ 1.15
SGCE-206ENST00000445866 SUPT16HQ9Y5B9 1047 aaKnown RBP22.23■■□□□ 1.15
SGCE-206ENST00000445866 IPO8O15397 1037 aaKnown RBP22.23■■□□□ 1.15
SGCE-206ENST00000445866 BTAF1O14981 1849 aa22.22■■□□□ 1.15
SGCE-206ENST00000445866 EIF5P55010 431 aaKnown RBP22.22■■□□□ 1.15
SGCE-206ENST00000445866 FLIIQ13045 1269 aa22.22■■□□□ 1.15
SGCE-206ENST00000445866 SMIM5Q71RC9 77 aa22.22■■□□□ 1.15
SGCE-206ENST00000445866 LRP10Q7Z4F1 713 aa22.22■■□□□ 1.15
SGCE-206ENST00000445866 TFCP2L1Q9NZI6 479 aa22.22■■□□□ 1.15
SGCE-206ENST00000445866 SBF2Q86WG5 1849 aa22.21■■□□□ 1.15
SGCE-206ENST00000445866 PAPPAQ13219 1627 aa22.21■■□□□ 1.15
SGCE-206ENST00000445866 FKBP5Q13451 457 aaPredicted RBP22.2■■□□□ 1.15
SGCE-206ENST00000445866 AKT1S1Q96B36 256 aa22.2■■□□□ 1.15
SGCE-206ENST00000445866 PLIN1O60240 522 aa22.2■■□□□ 1.14
SGCE-206ENST00000445866 TRAPPC3LQ5T215 181 aa22.2■■□□□ 1.14
SGCE-206ENST00000445866 TTLL7Q6ZT98 887 aa22.2■■□□□ 1.14
SGCE-206ENST00000445866 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.2■■□□□ 1.14
SGCE-206ENST00000445866 DDX58O95786 925 aaKnown RBP22.19■■□□□ 1.14
SGCE-206ENST00000445866 STK32BQ9NY57 414 aa22.19■■□□□ 1.14
SGCE-206ENST00000445866 TBC1D2BQ9UPU7 963 aa22.19■■□□□ 1.14
SGCE-206ENST00000445866 KIF16BQ96L93 1317 aa22.19■■□□□ 1.14
SGCE-206ENST00000445866 A0A087WZG4 1122 aa22.18■■□□□ 1.14
SGCE-206ENST00000445866 PHF14O94880 888 aa22.18■■□□□ 1.14
SGCE-206ENST00000445866 ZNF827Q17R98 1081 aa22.18■■□□□ 1.14
SGCE-206ENST00000445866 ANKRD13DQ6ZTN6 518 aa22.18■■□□□ 1.14
SGCE-206ENST00000445866 ZKSCAN2Q63HK3 967 aa22.17■■□□□ 1.14
SGCE-206ENST00000445866 ARHGAP45Q92619 1136 aa22.17■■□□□ 1.14
SGCE-206ENST00000445866 ARHGEF1Q92888 912 aaKnown RBP22.17■■□□□ 1.14
SGCE-206ENST00000445866 SLC15A2Q16348 729 aa22.17■■□□□ 1.14
SGCE-206ENST00000445866 KIF6Q6ZMV9 814 aa22.17■■□□□ 1.14
SGCE-206ENST00000445866 RIC3Q7Z5B4 369 aa22.17■■□□□ 1.14
SGCE-206ENST00000445866 AMIGO3Q86WK7 504 aa22.17■■□□□ 1.14
SGCE-206ENST00000445866 DZIP3Q86Y13 1208 aaKnown RBP22.17■■□□□ 1.14
SGCE-206ENST00000445866 PTPRCP08575 1304 aa22.16■■□□□ 1.14
SGCE-206ENST00000445866 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.16■■□□□ 1.14
SGCE-206ENST00000445866 PI4KAP2A4QPH2 592 aa22.16■■□□□ 1.14
SGCE-206ENST00000445866 PI4KAP1Q8N8J0 262 aa22.16■■□□□ 1.14
SGCE-206ENST00000445866 API5Q9BZZ5 524 aaKnown RBP22.16■■□□□ 1.14
SGCE-206ENST00000445866 UBR2Q8IWV8 1755 aa22.16■■□□□ 1.14
SGCE-206ENST00000445866 VIRMAQ69YN4 1812 aaKnown RBP22.15■■□□□ 1.14
SGCE-206ENST00000445866 RFC4P35249 363 aa22.15■■□□□ 1.14
SGCE-206ENST00000445866 KSR2Q6VAB6 950 aa22.15■■□□□ 1.14
SGCE-206ENST00000445866 ATF7IPQ6VMQ6 1270 aa22.15■■□□□ 1.14
SGCE-206ENST00000445866 ZBTB3Q9H5J0 574 aa22.15■■□□□ 1.14
SGCE-206ENST00000445866 ANO8Q9HCE9 1232 aaPredicted RBP22.15■■□□□ 1.14
SGCE-206ENST00000445866 F6X3S4 739 aa22.14■■□□□ 1.14
SGCE-206ENST00000445866 ADRA2BP18089 450 aa22.14■■□□□ 1.14
SGCE-206ENST00000445866 SSFA2P28290 1259 aa22.14■■□□□ 1.14
SGCE-206ENST00000445866 RRP1P56182 461 aaKnown RBP22.14■■□□□ 1.14
SGCE-206ENST00000445866 PLBD2Q8NHP8 589 aa22.14■■□□□ 1.14
SGCE-206ENST00000445866 MSH5O43196 834 aa22.14■■□□□ 1.13
SGCE-206ENST00000445866 FLAD1Q8NFF5 587 aa22.14■■□□□ 1.13
SGCE-206ENST00000445866 CLUAP1Q96AJ1 413 aa22.14■■□□□ 1.13
SGCE-206ENST00000445866 MAP3K2Q9Y2U5 619 aa22.14■■□□□ 1.13
SGCE-206ENST00000445866 ZPR1O75312 459 aa22.13■■□□□ 1.13
SGCE-206ENST00000445866 TRIM27P14373 513 aa22.13■■□□□ 1.13
SGCE-206ENST00000445866 SLC4A10Q6U841 1118 aa22.13■■□□□ 1.13
SGCE-206ENST00000445866 COL15A1P39059 1388 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms