RNA–Protein interactions for RNA: ENST00000445644.5

COMMD1-204, Transcript of copper metabolism domain containing 1, humanhuman

TSL 4

Gene COMMD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-204ENST00000445644 COL15A1P39059 1388 aa25.06■■□□□ 1.6
COMMD1-204ENST00000445644 RALBP1Q15311 655 aa25.06■■□□□ 1.6
COMMD1-204ENST00000445644 PXDNLA1KZ92 1463 aa25.06■■□□□ 1.6
COMMD1-204ENST00000445644 SCN7AQ01118 1682 aa25.06■■□□□ 1.6
COMMD1-204ENST00000445644 FKBP8Q14318 412 aa25.05■■□□□ 1.6
COMMD1-204ENST00000445644 NRXN2Q9P2S2 1712 aa25.04■■□□□ 1.6
COMMD1-204ENST00000445644 BTBD11A6QL63 1104 aa25.04■■□□□ 1.6
COMMD1-204ENST00000445644 DDR1Q08345 913 aa25.02■■□□□ 1.6
COMMD1-204ENST00000445644 USPL1Q5W0Q7 1092 aa25.02■■□□□ 1.6
COMMD1-204ENST00000445644 LAMB4A4D0S4 1761 aa25.02■■□□□ 1.6
COMMD1-204ENST00000445644 BCORQ6W2J9 1755 aa25.02■■□□□ 1.6
COMMD1-204ENST00000445644 HTATSF1O43719 755 aaKnown RBP25.01■■□□□ 1.59
COMMD1-204ENST00000445644 RTF1Q92541 710 aaKnown RBP25.01■■□□□ 1.59
COMMD1-204ENST00000445644 FMNL2Q96PY5 1086 aa25.01■■□□□ 1.59
COMMD1-204ENST00000445644 WWC3Q9ULE0 1092 aa25.01■■□□□ 1.59
COMMD1-204ENST00000445644 CANXP27824 592 aaKnown RBP25■■□□□ 1.59
COMMD1-204ENST00000445644 BCL2L12Q9HB09 334 aa25■■□□□ 1.59
COMMD1-204ENST00000445644 MYBBP1AQ9BQG0 1328 aaKnown RBP25■■□□□ 1.59
COMMD1-204ENST00000445644 TM4SF1P30408 202 aa24.99■■□□□ 1.59
COMMD1-204ENST00000445644 NARFQ9UHQ1 456 aa24.99■■□□□ 1.59
COMMD1-204ENST00000445644 PARP3Q9Y6F1 533 aa24.99■■□□□ 1.59
COMMD1-204ENST00000445644 PRAMEF22A3QJZ6 481 aa24.98■■□□□ 1.59
COMMD1-204ENST00000445644 STARD3NLO95772 234 aa24.98■■□□□ 1.59
COMMD1-204ENST00000445644 EIF5P55010 431 aaKnown RBP24.98■■□□□ 1.59
COMMD1-204ENST00000445644 POLRMTO00411 1230 aaKnown RBP24.97■■□□□ 1.59
COMMD1-204ENST00000445644 GRIN3BO60391 1043 aa24.96■■□□□ 1.59
COMMD1-204ENST00000445644 ZPR1O75312 459 aa24.96■■□□□ 1.59
COMMD1-204ENST00000445644 NFE2L2Q16236 605 aa24.96■■□□□ 1.59
COMMD1-204ENST00000445644 ZNF784Q8NCA9 323 aaPredicted RBP24.96■■□□□ 1.59
COMMD1-204ENST00000445644 TEX13AQ9BXU3 409 aaPredicted RBP24.96■■□□□ 1.59
COMMD1-204ENST00000445644 A1BGP04217 495 aa24.95■■□□□ 1.58
COMMD1-204ENST00000445644 USP16Q9Y5T5 823 aa24.95■■□□□ 1.58
COMMD1-204ENST00000445644 ARFGEF1Q9Y6D6 1849 aa24.95■■□□□ 1.58
COMMD1-204ENST00000445644 TGFB2P61812 414 aa24.94■■□□□ 1.58
COMMD1-204ENST00000445644 DLEC1Q9Y238 1755 aa24.94■■□□□ 1.58
COMMD1-204ENST00000445644 A0A0G2JLW4 131 aa24.93■■□□□ 1.58
COMMD1-204ENST00000445644 TAF7Q15545 349 aaPredicted RBP24.93■■□□□ 1.58
COMMD1-204ENST00000445644 THUMPD2Q9BTF0 503 aaKnown RBP24.93■■□□□ 1.58
COMMD1-204ENST00000445644 MIS18AQ9NYP9 233 aa24.93■■□□□ 1.58
COMMD1-204ENST00000445644 ANKRD31Q8N7Z5 1873 aa24.92■■□□□ 1.58
COMMD1-204ENST00000445644 NEFMP07197 916 aa24.92■■□□□ 1.58
COMMD1-204ENST00000445644 NFIXQ14938 502 aa24.92■■□□□ 1.58
COMMD1-204ENST00000445644 MAPK8IP3Q9UPT6 1336 aa24.91■■□□□ 1.58
COMMD1-204ENST00000445644 DPEP1P16444 411 aa24.91■■□□□ 1.58
COMMD1-204ENST00000445644 KCNA3P22001 575 aa24.91■■□□□ 1.58
COMMD1-204ENST00000445644 IL6STP40189 918 aaPredicted RBP24.91■■□□□ 1.58
COMMD1-204ENST00000445644 PIP4K2AP48426 406 aaPredicted RBP24.91■■□□□ 1.58
COMMD1-204ENST00000445644 PRKRIP1Q9H875 184 aaPredicted RBP24.91■■□□□ 1.58
COMMD1-204ENST00000445644 PNNQ9H307 717 aaKnown RBP24.89■■□□□ 1.58
COMMD1-204ENST00000445644 SNRPA1P09661 255 aaKnown RBP24.88■■□□□ 1.57
COMMD1-204ENST00000445644 TBC1D2BQ9UPU7 963 aa24.88■■□□□ 1.57
COMMD1-204ENST00000445644 ZNF330Q9Y3S2 320 aaPredicted RBP24.88■■□□□ 1.57
COMMD1-204ENST00000445644 A0A087WZG4 1122 aa24.87■■□□□ 1.57
COMMD1-204ENST00000445644 CARMIL3Q8ND23 1372 aa24.86■■□□□ 1.57
COMMD1-204ENST00000445644 ZEB1P37275 1124 aaPredicted RBP24.86■■□□□ 1.57
COMMD1-204ENST00000445644 TBC1D9BQ66K14 1250 aa24.86■■□□□ 1.57
COMMD1-204ENST00000445644 COL11A2P13942 1736 aaPredicted RBP24.86■■□□□ 1.57
COMMD1-204ENST00000445644 ADCY9O60503 1353 aa24.85■■□□□ 1.57
COMMD1-204ENST00000445644 NBPF26B4DH59 902 aa24.85■■□□□ 1.57
COMMD1-204ENST00000445644 CAMTA2O94983 1202 aa24.85■■□□□ 1.57
COMMD1-204ENST00000445644 NBPF10Q6P3W6 841 aaKnown RBP24.85■■□□□ 1.57
COMMD1-204ENST00000445644 CCDC146Q8IYE0 955 aa24.85■■□□□ 1.57
COMMD1-204ENST00000445644 NBPF15Q8N660 670 aa24.85■■□□□ 1.57
COMMD1-204ENST00000445644 SERPINB2P05120 415 aa24.84■■□□□ 1.57
COMMD1-204ENST00000445644 CHRNA5P30532 468 aa24.84■■□□□ 1.57
COMMD1-204ENST00000445644 TMPOP42166 694 aaKnown RBP24.84■■□□□ 1.57
COMMD1-204ENST00000445644 BCS1LQ9Y276 419 aa24.84■■□□□ 1.57
COMMD1-204ENST00000445644 RIPK4P57078 832 aa24.83■■□□□ 1.57
COMMD1-204ENST00000445644 EIF4A1P60842 406 aaKnown RBP24.83■■□□□ 1.57
COMMD1-204ENST00000445644 BICDL1Q6ZP65 573 aa24.83■■□□□ 1.57
COMMD1-204ENST00000445644 PNISRQ8TF01 805 aaKnown RBP24.82■■□□□ 1.56
COMMD1-204ENST00000445644 DZIP3Q86Y13 1208 aaKnown RBP24.81■■□□□ 1.56
COMMD1-204ENST00000445644 ADAMTS8Q9UP79 889 aa24.81■■□□□ 1.56
COMMD1-204ENST00000445644 RRP7AQ9Y3A4 280 aaKnown RBP24.81■■□□□ 1.56
COMMD1-204ENST00000445644 ATP10DQ9P241 1426 aa24.8■■□□□ 1.56
COMMD1-204ENST00000445644 GIGYF1O75420 1035 aaPredicted RBP24.8■■□□□ 1.56
COMMD1-204ENST00000445644 NUP98P52948 1817 aa24.79■■□□□ 1.56
COMMD1-204ENST00000445644 SBF1O95248 1867 aa24.79■■□□□ 1.56
COMMD1-204ENST00000445644 CACNA1SQ13698 1873 aa24.79■■□□□ 1.56
COMMD1-204ENST00000445644 WDR43Q15061 677 aaKnown RBP eCLIP24.78■■□□□ 1.56
COMMD1-204ENST00000445644 RUNDC1Q96C34 613 aa24.78■■□□□ 1.56
COMMD1-204ENST00000445644 PIM2Q9P1W9 311 aa24.78■■□□□ 1.56
COMMD1-204ENST00000445644 PRR5LQ6MZQ0 368 aa24.76■■□□□ 1.55
COMMD1-204ENST00000445644 TRIM35Q9UPQ4 493 aa24.76■■□□□ 1.55
COMMD1-204ENST00000445644 NEUROD2Q15784 382 aa24.75■■□□□ 1.55
COMMD1-204ENST00000445644 CCDC24Q8N4L8 307 aa24.75■■□□□ 1.55
COMMD1-204ENST00000445644 TSPYL4Q9UJ04 414 aa24.75■■□□□ 1.55
COMMD1-204ENST00000445644 ARFGEF2Q9Y6D5 1785 aa24.75■■□□□ 1.55
COMMD1-204ENST00000445644 DALRD3Q5D0E6 543 aaKnown RBP24.74■■□□□ 1.55
COMMD1-204ENST00000445644 NPM2Q86SE8 214 aaKnown RBP24.74■■□□□ 1.55
COMMD1-204ENST00000445644 LMOD3Q0VAK6 560 aa24.73■■□□□ 1.55
COMMD1-204ENST00000445644 CCDC184Q52MB2 194 aa24.72■■□□□ 1.55
COMMD1-204ENST00000445644 CLEC4GQ6UXB4 293 aa24.72■■□□□ 1.55
COMMD1-204ENST00000445644 ARHGAP27Q6ZUM4 889 aa24.72■■□□□ 1.55
COMMD1-204ENST00000445644 SETDB2Q96T68 719 aa24.72■■□□□ 1.55
COMMD1-204ENST00000445644 HLFQ16534 295 aa24.71■■□□□ 1.55
COMMD1-204ENST00000445644 C2CD5Q86YS7 1000 aa24.71■■□□□ 1.55
COMMD1-204ENST00000445644 CCDC88AQ3V6T2 1871 aa24.7■■□□□ 1.55
COMMD1-204ENST00000445644 BABAM1Q9NWV8 329 aa24.7■■□□□ 1.54
COMMD1-204ENST00000445644 TNRC6CQ9HCJ0 1690 aaKnown RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms