RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 ZNF646O15015 1829 aaPredicted RBP9.82□□□□□ -0.84
BRAFP1-201ENST00000445336 RPTORQ8N122 1335 aa9.82□□□□□ -0.84
BRAFP1-201ENST00000445336 CHRDL2Q6WN34 429 aa9.81□□□□□ -0.84
BRAFP1-201ENST00000445336 CLEC11AQ9Y240 323 aa9.81□□□□□ -0.84
BRAFP1-201ENST00000445336 DDNO94850 711 aaPredicted RBP9.8□□□□□ -0.84
BRAFP1-201ENST00000445336 C1QTNF1Q9BXJ1 281 aa9.8□□□□□ -0.84
BRAFP1-201ENST00000445336 PGAP2Q9UHJ9 254 aa9.8□□□□□ -0.84
BRAFP1-201ENST00000445336 CHIC2Q9UKJ5 165 aa9.8□□□□□ -0.84
BRAFP1-201ENST00000445336 HCN4Q9Y3Q4 1203 aa9.8□□□□□ -0.84
BRAFP1-201ENST00000445336 CNTNAP4Q9C0A0 1308 aa9.79□□□□□ -0.84
BRAFP1-201ENST00000445336 AFDNP55196 1824 aaKnown RBP9.79□□□□□ -0.84
BRAFP1-201ENST00000445336 TRAPPC3LQ5T215 181 aa9.79□□□□□ -0.84
BRAFP1-201ENST00000445336 COL26A1Q96A83 441 aa9.79□□□□□ -0.84
BRAFP1-201ENST00000445336 GYS1P13807 737 aa9.78□□□□□ -0.84
BRAFP1-201ENST00000445336 HDAC9Q9UKV0 1011 aa9.78□□□□□ -0.84
BRAFP1-201ENST00000445336 LTN1O94822 1766 aa9.78□□□□□ -0.84
BRAFP1-201ENST00000445336 LAMB1P07942 1786 aa9.78□□□□□ -0.84
BRAFP1-201ENST00000445336 CD163L1Q9NR16 1453 aa9.78□□□□□ -0.84
BRAFP1-201ENST00000445336 KCNQ4P56696 695 aa9.78□□□□□ -0.84
BRAFP1-201ENST00000445336 LRIT3Q3SXY7 679 aa9.78□□□□□ -0.84
BRAFP1-201ENST00000445336 TMEM132EQ6IEE7 984 aa9.78□□□□□ -0.84
BRAFP1-201ENST00000445336 FAM155AB1AL88 458 aaPredicted RBP9.77□□□□□ -0.85
BRAFP1-201ENST00000445336 GPC2Q8N158 579 aa9.77□□□□□ -0.85
BRAFP1-201ENST00000445336 TAOK3Q9H2K8 898 aa9.77□□□□□ -0.85
BRAFP1-201ENST00000445336 EAPPQ56P03 285 aaPredicted RBP9.76□□□□□ -0.85
BRAFP1-201ENST00000445336 NUTM2GQ5VZR2 741 aa9.76□□□□□ -0.85
BRAFP1-201ENST00000445336 MAP1SQ66K74 1059 aaPredicted RBP9.76□□□□□ -0.85
BRAFP1-201ENST00000445336 KCNH6Q9H252 994 aa9.76□□□□□ -0.85
BRAFP1-201ENST00000445336 ZC3H15Q8WU90 426 aaKnown RBP9.76□□□□□ -0.85
BRAFP1-201ENST00000445336 RTCBQ9Y3I0 505 aaKnown RBP9.76□□□□□ -0.85
BRAFP1-201ENST00000445336 NR2E3Q9Y5X4 410 aa9.75□□□□□ -0.85
BRAFP1-201ENST00000445336 AMIGO3Q86WK7 504 aa9.75□□□□□ -0.85
BRAFP1-201ENST00000445336 POTEFA5A3E0 1075 aa9.74□□□□□ -0.85
BRAFP1-201ENST00000445336 NLRP6P59044 892 aa9.74□□□□□ -0.85
BRAFP1-201ENST00000445336 DEFB123Q8N688 67 aa9.74□□□□□ -0.85
BRAFP1-201ENST00000445336 KIF7Q2M1P5 1343 aa9.74□□□□□ -0.85
BRAFP1-201ENST00000445336 CDHR2Q9BYE9 1310 aa9.74□□□□□ -0.85
BRAFP1-201ENST00000445336 RGMBQ6NW40 437 aa9.74□□□□□ -0.85
BRAFP1-201ENST00000445336 MRC1P22897 1456 aa9.74□□□□□ -0.85
BRAFP1-201ENST00000445336 PHF14O94880 888 aa9.73□□□□□ -0.85
BRAFP1-201ENST00000445336 LINC00116Q8NCU8 138 aa9.73□□□□□ -0.85
BRAFP1-201ENST00000445336 ZCRB1Q8TBF4 217 aaKnown RBP9.73□□□□□ -0.85
BRAFP1-201ENST00000445336 STAC3Q96MF2 364 aa9.73□□□□□ -0.85
BRAFP1-201ENST00000445336 KDRP35968 1356 aa9.73□□□□□ -0.85
BRAFP1-201ENST00000445336 RPS6KA4O75676 772 aa9.73□□□□□ -0.85
BRAFP1-201ENST00000445336 SLC10A3P09131 477 aa9.73□□□□□ -0.85
BRAFP1-201ENST00000445336 HTATIP2Q9BUP3 242 aa9.73□□□□□ -0.85
BRAFP1-201ENST00000445336 SSC5DA1L4H1 1573 aa9.73□□□□□ -0.85
BRAFP1-201ENST00000445336 GNPATO15228 680 aa9.72□□□□□ -0.85
BRAFP1-201ENST00000445336 TM4SF1P30408 202 aa9.72□□□□□ -0.85
BRAFP1-201ENST00000445336 FZD9O00144 591 aa9.72□□□□□ -0.85
BRAFP1-201ENST00000445336 TJAP1Q5JTD0 557 aa9.72□□□□□ -0.85
BRAFP1-201ENST00000445336 CNKSR2Q8WXI2 1034 aa9.72□□□□□ -0.85
BRAFP1-201ENST00000445336 SYTL4Q96C24 671 aaPredicted RBP9.72□□□□□ -0.85
BRAFP1-201ENST00000445336 ZBTB7BO15156 539 aaPredicted RBP9.71□□□□□ -0.85
BRAFP1-201ENST00000445336 TMEM106CQ9BVX2 250 aa9.71□□□□□ -0.85
BRAFP1-201ENST00000445336 COL2A1P02458 1487 aaPredicted RBP9.71□□□□□ -0.85
BRAFP1-201ENST00000445336 POLRMTO00411 1230 aaKnown RBP9.71□□□□□ -0.86
BRAFP1-201ENST00000445336 FKTNO75072 461 aa9.71□□□□□ -0.86
BRAFP1-201ENST00000445336 LMOD1P29536 600 aaPredicted RBP9.71□□□□□ -0.86
BRAFP1-201ENST00000445336 KIF23Q02241 960 aaPredicted RBP9.71□□□□□ -0.86
BRAFP1-201ENST00000445336 NLRP2Q9NX02 1062 aa9.71□□□□□ -0.86
BRAFP1-201ENST00000445336 SOX1O00570 391 aaPredicted RBP9.7□□□□□ -0.86
BRAFP1-201ENST00000445336 CHRNA5P30532 468 aa9.7□□□□□ -0.86
BRAFP1-201ENST00000445336 ZNF609O15014 1411 aa9.7□□□□□ -0.86
BRAFP1-201ENST00000445336 LOC102724428A0A0B4J2F2 783 aa9.69□□□□□ -0.86
BRAFP1-201ENST00000445336 SIK1P57059 783 aa9.69□□□□□ -0.86
BRAFP1-201ENST00000445336 TMEM265A0A087WTH1 108 aa9.69□□□□□ -0.86
BRAFP1-201ENST00000445336 H0YIN7 160 aa9.69□□□□□ -0.86
BRAFP1-201ENST00000445336 CELF2O95319 508 aaKnown RBP9.69□□□□□ -0.86
BRAFP1-201ENST00000445336 MAP3K11Q16584 847 aa9.69□□□□□ -0.86
BRAFP1-201ENST00000445336 CCDC24Q8N4L8 307 aa9.69□□□□□ -0.86
BRAFP1-201ENST00000445336 ZNF296Q8WUU4 475 aaPredicted RBP9.69□□□□□ -0.86
BRAFP1-201ENST00000445336 TRPA1O75762 1119 aa9.68□□□□□ -0.86
BRAFP1-201ENST00000445336 RFC4P35249 363 aa9.68□□□□□ -0.86
BRAFP1-201ENST00000445336 GRIPAP1Q4V328 841 aa9.68□□□□□ -0.86
BRAFP1-201ENST00000445336 SAMD7Q7Z3H4 446 aa9.68□□□□□ -0.86
BRAFP1-201ENST00000445336 DDX54Q8TDD1 881 aaKnown RBP9.68□□□□□ -0.86
BRAFP1-201ENST00000445336 GPR25O00155 361 aa9.68□□□□□ -0.86
BRAFP1-201ENST00000445336 DDR1Q08345 913 aa9.68□□□□□ -0.86
BRAFP1-201ENST00000445336 STYK1Q6J9G0 422 aa9.68□□□□□ -0.86
BRAFP1-201ENST00000445336 ARHGEF1Q92888 912 aaKnown RBP9.68□□□□□ -0.86
BRAFP1-201ENST00000445336 PCDH11XQ9BZA7 1347 aa9.68□□□□□ -0.86
BRAFP1-201ENST00000445336 PCDH11YQ9BZA8 1340 aa9.68□□□□□ -0.86
BRAFP1-201ENST00000445336 USP42Q9H9J4 1324 aaKnown RBP9.68□□□□□ -0.86
BRAFP1-201ENST00000445336 ANKRD31Q8N7Z5 1873 aa9.68□□□□□ -0.86
BRAFP1-201ENST00000445336 NKX1-1Q15270 411 aaPredicted RBP9.67□□□□□ -0.86
BRAFP1-201ENST00000445336 ZNF692Q9BU19 519 aaPredicted RBP9.67□□□□□ -0.86
BRAFP1-201ENST00000445336 SRPK2P78362 688 aaKnown RBP9.67□□□□□ -0.86
BRAFP1-201ENST00000445336 CNKSR1Q969H4 720 aa9.67□□□□□ -0.86
BRAFP1-201ENST00000445336 CSRNP1Q96S65 589 aa9.67□□□□□ -0.86
BRAFP1-201ENST00000445336 COL11A2P13942 1736 aaPredicted RBP9.67□□□□□ -0.86
BRAFP1-201ENST00000445336 MON2Q7Z3U7 1717 aa9.67□□□□□ -0.86
BRAFP1-201ENST00000445336 CACNA1AO00555 2505 aa9.66□□□□□ -0.86
BRAFP1-201ENST00000445336 KDM2AQ9Y2K7 1162 aa9.66□□□□□ -0.86
BRAFP1-201ENST00000445336 FKBP4Q02790 459 aaKnown RBP eCLIP9.66□□□□□ -0.86
BRAFP1-201ENST00000445336 ANKRD24Q8TF21 1146 aa9.66□□□□□ -0.86
BRAFP1-201ENST00000445336 CDK19Q9BWU1 502 aa9.65□□□□□ -0.86
BRAFP1-201ENST00000445336 ADARB2Q9NS39 739 aaKnown RBP9.65□□□□□ -0.86
BRAFP1-201ENST00000445336 ZNF541Q9H0D2 1346 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms