RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 NFIXQ14938 502 aa19.2■□□□□ 0.66
SMARCAL1-210ENST00000445153 DALRD3Q5D0E6 543 aaKnown RBP19.2■□□□□ 0.66
SMARCAL1-210ENST00000445153 NARFQ9UHQ1 456 aa19.2■□□□□ 0.66
SMARCAL1-210ENST00000445153 VIRMAQ69YN4 1812 aaKnown RBP19.2■□□□□ 0.66
SMARCAL1-210ENST00000445153 IL17REQ8NFR9 667 aa19.19■□□□□ 0.66
SMARCAL1-210ENST00000445153 COL3A1P02461 1466 aaPredicted RBP19.19■□□□□ 0.66
SMARCAL1-210ENST00000445153 ARFGEF1Q9Y6D6 1849 aa19.18■□□□□ 0.66
SMARCAL1-210ENST00000445153 COL15A1P39059 1388 aa19.18■□□□□ 0.66
SMARCAL1-210ENST00000445153 TOMM70O94826 608 aa19.17■□□□□ 0.66
SMARCAL1-210ENST00000445153 CANXP27824 592 aaKnown RBP19.17■□□□□ 0.66
SMARCAL1-210ENST00000445153 VSIG10Q8N0Z9 540 aa19.17■□□□□ 0.66
SMARCAL1-210ENST00000445153 U2SURPO15042 1029 aaKnown RBP19.16■□□□□ 0.66
SMARCAL1-210ENST00000445153 SERPINB2P05120 415 aa19.15■□□□□ 0.66
SMARCAL1-210ENST00000445153 ZNF496Q96IT1 587 aaPredicted RBP19.15■□□□□ 0.66
SMARCAL1-210ENST00000445153 AFDNP55196 1824 aaKnown RBP19.15■□□□□ 0.66
SMARCAL1-210ENST00000445153 UBR2Q8IWV8 1755 aa19.14■□□□□ 0.66
SMARCAL1-210ENST00000445153 PRELPP51888 382 aa19.14■□□□□ 0.65
SMARCAL1-210ENST00000445153 EIF5P55010 431 aaKnown RBP19.14■□□□□ 0.65
SMARCAL1-210ENST00000445153 RNF181Q9P0P0 153 aa19.14■□□□□ 0.65
SMARCAL1-210ENST00000445153 NPC1L1Q9UHC9 1359 aa19.14■□□□□ 0.65
SMARCAL1-210ENST00000445153 GNAT3A8MTJ3 354 aa19.13■□□□□ 0.65
SMARCAL1-210ENST00000445153 IFFO2Q5TF58 517 aa19.13■□□□□ 0.65
SMARCAL1-210ENST00000445153 DNAJC5GQ8N7S2 189 aa19.13■□□□□ 0.65
SMARCAL1-210ENST00000445153 PHACTR3Q96KR7 559 aa19.13■□□□□ 0.65
SMARCAL1-210ENST00000445153 CARMIL3Q8ND23 1372 aa19.13■□□□□ 0.65
SMARCAL1-210ENST00000445153 NRXN2Q9P2S2 1712 aa19.13■□□□□ 0.65
SMARCAL1-210ENST00000445153 RASSF7Q02833 373 aa19.12■□□□□ 0.65
SMARCAL1-210ENST00000445153 ZNF790Q6PG37 636 aa19.12■□□□□ 0.65
SMARCAL1-210ENST00000445153 BICDL1Q6ZP65 573 aa19.12■□□□□ 0.65
SMARCAL1-210ENST00000445153 KCNQ3O43525 872 aa19.11■□□□□ 0.65
SMARCAL1-210ENST00000445153 APLP1P51693 650 aa19.11■□□□□ 0.65
SMARCAL1-210ENST00000445153 TTC5Q8N0Z6 440 aa19.11■□□□□ 0.65
SMARCAL1-210ENST00000445153 RRAGCQ9HB90 399 aa19.11■□□□□ 0.65
SMARCAL1-210ENST00000445153 SBF1O95248 1867 aa19.11■□□□□ 0.65
SMARCAL1-210ENST00000445153 HEG1Q9ULI3 1381 aa19.1■□□□□ 0.65
SMARCAL1-210ENST00000445153 STARD3NLO95772 234 aa19.1■□□□□ 0.65
SMARCAL1-210ENST00000445153 TEFQ10587 303 aa19.1■□□□□ 0.65
SMARCAL1-210ENST00000445153 TBC1D9BQ66K14 1250 aa19.1■□□□□ 0.65
SMARCAL1-210ENST00000445153 TBC1D2BQ9UPU7 963 aa19.1■□□□□ 0.65
SMARCAL1-210ENST00000445153 C2CD5Q86YS7 1000 aa19.09■□□□□ 0.65
SMARCAL1-210ENST00000445153 GAS2L2Q8NHY3 880 aa19.09■□□□□ 0.65
SMARCAL1-210ENST00000445153 A1BGP04217 495 aa19.08■□□□□ 0.64
SMARCAL1-210ENST00000445153 HTRA3P83110 453 aa19.08■□□□□ 0.64
SMARCAL1-210ENST00000445153 CCDC24Q8N4L8 307 aa19.08■□□□□ 0.64
SMARCAL1-210ENST00000445153 RBM46Q8TBY0 533 aaKnown RBP19.08■□□□□ 0.64
SMARCAL1-210ENST00000445153 SIPA1L3O60292 1781 aaPredicted RBP19.08■□□□□ 0.64
SMARCAL1-210ENST00000445153 CEMIPQ8WUJ3 1361 aa19.07■□□□□ 0.64
SMARCAL1-210ENST00000445153 PRKAR2BP31323 418 aa19.07■□□□□ 0.64
SMARCAL1-210ENST00000445153 TTLL6Q8N841 843 aa19.07■□□□□ 0.64
SMARCAL1-210ENST00000445153 RSPH6AQ9H0K4 717 aa19.07■□□□□ 0.64
SMARCAL1-210ENST00000445153 KDM2BQ8NHM5 1336 aa19.06■□□□□ 0.64
SMARCAL1-210ENST00000445153 A0A087WZG4 1122 aa19.06■□□□□ 0.64
SMARCAL1-210ENST00000445153 ZNF330Q9Y3S2 320 aaPredicted RBP19.06■□□□□ 0.64
SMARCAL1-210ENST00000445153 DLEC1Q9Y238 1755 aa19.06■□□□□ 0.64
SMARCAL1-210ENST00000445153 H0YIN7 160 aa19.05■□□□□ 0.64
SMARCAL1-210ENST00000445153 NFKBIEO00221 500 aa19.05■□□□□ 0.64
SMARCAL1-210ENST00000445153 IL6STP40189 918 aaPredicted RBP19.05■□□□□ 0.64
SMARCAL1-210ENST00000445153 TEX13AQ9BXU3 409 aaPredicted RBP19.05■□□□□ 0.64
SMARCAL1-210ENST00000445153 USP16Q9Y5T5 823 aa19.05■□□□□ 0.64
SMARCAL1-210ENST00000445153 PRAMEF22A3QJZ6 481 aa19.04■□□□□ 0.64
SMARCAL1-210ENST00000445153 LMNB1P20700 586 aa19.04■□□□□ 0.64
SMARCAL1-210ENST00000445153 PIP4K2AP48426 406 aaPredicted RBP19.04■□□□□ 0.64
SMARCAL1-210ENST00000445153 PRR5LQ6MZQ0 368 aa19.04■□□□□ 0.64
SMARCAL1-210ENST00000445153 C16orf71Q8IYS4 520 aaPredicted RBP19.04■□□□□ 0.64
SMARCAL1-210ENST00000445153 FMNL2Q96PY5 1086 aa19.04■□□□□ 0.64
SMARCAL1-210ENST00000445153 ANKRD31Q8N7Z5 1873 aa19.03■□□□□ 0.64
SMARCAL1-210ENST00000445153 BTBD11A6QL63 1104 aa19.03■□□□□ 0.64
SMARCAL1-210ENST00000445153 CAMTA2O94983 1202 aa19.03■□□□□ 0.64
SMARCAL1-210ENST00000445153 BRIP1Q9BX63 1249 aa19.02■□□□□ 0.64
SMARCAL1-210ENST00000445153 PPP2R1AP30153 589 aa19.01■□□□□ 0.63
SMARCAL1-210ENST00000445153 FSTL1Q12841 308 aa19.01■□□□□ 0.63
SMARCAL1-210ENST00000445153 MCM10Q7L590 875 aa19.01■□□□□ 0.63
SMARCAL1-210ENST00000445153 ZNF622Q969S3 477 aaKnown RBP eCLIP19.01■□□□□ 0.63
SMARCAL1-210ENST00000445153 ZNF219Q9P2Y4 722 aaPredicted RBP19.01■□□□□ 0.63
SMARCAL1-210ENST00000445153 SCN7AQ01118 1682 aa19.01■□□□□ 0.63
SMARCAL1-210ENST00000445153 GLTPD2A6NH11 291 aa19■□□□□ 0.63
SMARCAL1-210ENST00000445153 C21orf2O43822 256 aa19■□□□□ 0.63
SMARCAL1-210ENST00000445153 DCTN1Q14203 1278 aa19■□□□□ 0.63
SMARCAL1-210ENST00000445153 CFAP53Q96M91 514 aa19■□□□□ 0.63
SMARCAL1-210ENST00000445153 WDR90Q96KV7 1748 aa19■□□□□ 0.63
SMARCAL1-210ENST00000445153 POTECB2RU33 542 aa18.99■□□□□ 0.63
SMARCAL1-210ENST00000445153 U2AF1L5P0DN76 240 aaPredicted RBP18.99■□□□□ 0.63
SMARCAL1-210ENST00000445153 U2AF1Q01081 240 aaKnown RBP eCLIP18.99■□□□□ 0.63
SMARCAL1-210ENST00000445153 ZC3H4Q9UPT8 1303 aaKnown RBP18.99■□□□□ 0.63
SMARCAL1-210ENST00000445153 TNRC6CQ9HCJ0 1690 aaKnown RBP18.98■□□□□ 0.63
SMARCAL1-210ENST00000445153 COL11A2P13942 1736 aaPredicted RBP18.98■□□□□ 0.63
SMARCAL1-210ENST00000445153 PDE6BP35913 854 aa18.98■□□□□ 0.63
SMARCAL1-210ENST00000445153 DZIP3Q86Y13 1208 aaKnown RBP18.98■□□□□ 0.63
SMARCAL1-210ENST00000445153 CCDC88AQ3V6T2 1871 aa18.98■□□□□ 0.63
SMARCAL1-210ENST00000445153 KLRG1Q96E93 195 aa18.97■□□□□ 0.63
SMARCAL1-210ENST00000445153 SETDB2Q96T68 719 aa18.97■□□□□ 0.63
SMARCAL1-210ENST00000445153 NUDCQ9Y266 331 aa18.97■□□□□ 0.63
SMARCAL1-210ENST00000445153 NBPF26B4DH59 902 aa18.96■□□□□ 0.63
SMARCAL1-210ENST00000445153 NBPF10Q6P3W6 841 aaKnown RBP18.96■□□□□ 0.63
SMARCAL1-210ENST00000445153 NBPF15Q8N660 670 aa18.96■□□□□ 0.63
SMARCAL1-210ENST00000445153 SNRPA1P09661 255 aaKnown RBP18.95■□□□□ 0.62
SMARCAL1-210ENST00000445153 SRGNP10124 158 aa18.95■□□□□ 0.62
SMARCAL1-210ENST00000445153 VEGFAP15692 232 aaPredicted RBP18.95■□□□□ 0.62
SMARCAL1-210ENST00000445153 CNBD1Q8NA66 436 aa18.95■□□□□ 0.62
SMARCAL1-210ENST00000445153 SMC1BQ8NDV3 1235 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms