RNA–Protein interactions for RNA: ENST00000444997.1

PDCD4-203, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-203ENST00000444997 COL15A1P39059 1388 aa23.08■■□□□ 1.29
PDCD4-203ENST00000444997 NPM2Q86SE8 214 aaKnown RBP23.07■■□□□ 1.28
PDCD4-203ENST00000444997 NARFQ9UHQ1 456 aa23.07■■□□□ 1.28
PDCD4-203ENST00000444997 A0A087WZG4 1122 aa23.06■■□□□ 1.28
PDCD4-203ENST00000444997 WWC3Q9ULE0 1092 aa23.06■■□□□ 1.28
PDCD4-203ENST00000444997 MAPK8IP3Q9UPT6 1336 aa23.06■■□□□ 1.28
PDCD4-203ENST00000444997 C4AP0C0L4 1744 aa23.05■■□□□ 1.28
PDCD4-203ENST00000444997 DCTN1Q14203 1278 aa23.05■■□□□ 1.28
PDCD4-203ENST00000444997 C10orf71Q711Q0 1435 aa23.05■■□□□ 1.28
PDCD4-203ENST00000444997 UBR2Q8IWV8 1755 aa23.04■■□□□ 1.28
PDCD4-203ENST00000444997 CHD4Q14839 1912 aa23.04■■□□□ 1.28
PDCD4-203ENST00000444997 A0A0G2JLW4 131 aa23.03■■□□□ 1.28
PDCD4-203ENST00000444997 KCNQ3O43525 872 aa23.03■■□□□ 1.28
PDCD4-203ENST00000444997 TM4SF1P30408 202 aa23.03■■□□□ 1.28
PDCD4-203ENST00000444997 TAF7Q15545 349 aaPredicted RBP23.03■■□□□ 1.28
PDCD4-203ENST00000444997 PLEKHF1Q96S99 279 aa23.03■■□□□ 1.28
PDCD4-203ENST00000444997 ZNF330Q9Y3S2 320 aaPredicted RBP23.03■■□□□ 1.28
PDCD4-203ENST00000444997 EIF5P55010 431 aaKnown RBP23.02■■□□□ 1.28
PDCD4-203ENST00000444997 DDR1Q08345 913 aa23.02■■□□□ 1.28
PDCD4-203ENST00000444997 MYBBP1AQ9BQG0 1328 aaKnown RBP23.02■■□□□ 1.28
PDCD4-203ENST00000444997 SIPA1L3O60292 1781 aaPredicted RBP23.01■■□□□ 1.27
PDCD4-203ENST00000444997 PXDNLA1KZ92 1463 aa23.01■■□□□ 1.27
PDCD4-203ENST00000444997 POLRMTO00411 1230 aaKnown RBP23.01■■□□□ 1.27
PDCD4-203ENST00000444997 NFE2L2Q16236 605 aa23.01■■□□□ 1.27
PDCD4-203ENST00000444997 SNRPA1P09661 255 aaKnown RBP23■■□□□ 1.27
PDCD4-203ENST00000444997 DPEP1P16444 411 aa23■■□□□ 1.27
PDCD4-203ENST00000444997 ZEB1P37275 1124 aaPredicted RBP23■■□□□ 1.27
PDCD4-203ENST00000444997 IL6STP40189 918 aaPredicted RBP23■■□□□ 1.27
PDCD4-203ENST00000444997 PNISRQ8TF01 805 aaKnown RBP23■■□□□ 1.27
PDCD4-203ENST00000444997 A1BGP04217 495 aa22.99■■□□□ 1.27
PDCD4-203ENST00000444997 NFIXQ14938 502 aa22.99■■□□□ 1.27
PDCD4-203ENST00000444997 BCS1LQ9Y276 419 aa22.99■■□□□ 1.27
PDCD4-203ENST00000444997 BCL2L12Q9HB09 334 aa22.97■■□□□ 1.27
PDCD4-203ENST00000444997 USP16Q9Y5T5 823 aa22.97■■□□□ 1.27
PDCD4-203ENST00000444997 KIF13BQ9NQT8 1826 aa22.96■■□□□ 1.27
PDCD4-203ENST00000444997 PIM2Q9P1W9 311 aa22.96■■□□□ 1.27
PDCD4-203ENST00000444997 TBC1D2BQ9UPU7 963 aa22.96■■□□□ 1.27
PDCD4-203ENST00000444997 SERPINB2P05120 415 aa22.95■■□□□ 1.26
PDCD4-203ENST00000444997 BICDL1Q6ZP65 573 aa22.95■■□□□ 1.26
PDCD4-203ENST00000444997 MIS18AQ9NYP9 233 aa22.95■■□□□ 1.26
PDCD4-203ENST00000444997 WDR43Q15061 677 aaKnown RBP eCLIP22.94■■□□□ 1.26
PDCD4-203ENST00000444997 UTRNP46939 3433 aa22.94■■□□□ 1.26
PDCD4-203ENST00000444997 PRAMEF22A3QJZ6 481 aa22.93■■□□□ 1.26
PDCD4-203ENST00000444997 KCNA3P22001 575 aa22.92■■□□□ 1.26
PDCD4-203ENST00000444997 RIPK4P57078 832 aa22.92■■□□□ 1.26
PDCD4-203ENST00000444997 DALRD3Q5D0E6 543 aaKnown RBP22.92■■□□□ 1.26
PDCD4-203ENST00000444997 DZIP3Q86Y13 1208 aaKnown RBP22.92■■□□□ 1.26
PDCD4-203ENST00000444997 LMOD3Q0VAK6 560 aa22.91■■□□□ 1.26
PDCD4-203ENST00000444997 TBC1D9BQ66K14 1250 aa22.91■■□□□ 1.26
PDCD4-203ENST00000444997 ARHGAP27Q6ZUM4 889 aa22.91■■□□□ 1.26
PDCD4-203ENST00000444997 THUMPD2Q9BTF0 503 aaKnown RBP22.91■■□□□ 1.26
PDCD4-203ENST00000444997 N4BP2Q86UW6 1770 aaPredicted RBP22.91■■□□□ 1.26
PDCD4-203ENST00000444997 CHRNA5P30532 468 aa22.9■■□□□ 1.26
PDCD4-203ENST00000444997 PIP4K2AP48426 406 aaPredicted RBP22.9■■□□□ 1.26
PDCD4-203ENST00000444997 CAMTA2O94983 1202 aa22.89■■□□□ 1.25
PDCD4-203ENST00000444997 SETDB2Q96T68 719 aa22.89■■□□□ 1.25
PDCD4-203ENST00000444997 PRKRIP1Q9H875 184 aaPredicted RBP22.89■■□□□ 1.25
PDCD4-203ENST00000444997 KIAA1551Q9HCM1 1747 aa22.88■■□□□ 1.25
PDCD4-203ENST00000444997 NPHP1O15259 732 aa22.88■■□□□ 1.25
PDCD4-203ENST00000444997 GIGYF1O75420 1035 aaPredicted RBP22.88■■□□□ 1.25
PDCD4-203ENST00000444997 TMPOP42166 694 aaKnown RBP22.88■■□□□ 1.25
PDCD4-203ENST00000444997 ZNF652Q9Y2D9 606 aa22.88■■□□□ 1.25
PDCD4-203ENST00000444997 GOLGB1Q14789 3259 aaKnown RBP22.88■■□□□ 1.25
PDCD4-203ENST00000444997 CARMIL3Q8ND23 1372 aa22.88■■□□□ 1.25
PDCD4-203ENST00000444997 EIF4A1P60842 406 aaKnown RBP22.87■■□□□ 1.25
PDCD4-203ENST00000444997 ATP10DQ9P241 1426 aa22.87■■□□□ 1.25
PDCD4-203ENST00000444997 H0YIN7 160 aa22.86■■□□□ 1.25
PDCD4-203ENST00000444997 CLEC4GQ6UXB4 293 aa22.86■■□□□ 1.25
PDCD4-203ENST00000444997 CCDC146Q8IYE0 955 aa22.86■■□□□ 1.25
PDCD4-203ENST00000444997 RUNDC1Q96C34 613 aa22.86■■□□□ 1.25
PDCD4-203ENST00000444997 TSPYL4Q9UJ04 414 aa22.86■■□□□ 1.25
PDCD4-203ENST00000444997 C2CD5Q86YS7 1000 aa22.85■■□□□ 1.25
PDCD4-203ENST00000444997 GPBP1L1Q9HC44 474 aaPredicted RBP22.85■■□□□ 1.25
PDCD4-203ENST00000444997 PDZRN3Q9UPQ7 1066 aa22.85■■□□□ 1.25
PDCD4-203ENST00000444997 DLG5Q8TDM6 1919 aa22.84■■□□□ 1.25
PDCD4-203ENST00000444997 NBPF26B4DH59 902 aa22.84■■□□□ 1.25
PDCD4-203ENST00000444997 PDE6BP35913 854 aa22.84■■□□□ 1.25
PDCD4-203ENST00000444997 NEUROD2Q15784 382 aa22.84■■□□□ 1.25
PDCD4-203ENST00000444997 NBPF10Q6P3W6 841 aaKnown RBP22.84■■□□□ 1.25
PDCD4-203ENST00000444997 NBPF15Q8N660 670 aa22.84■■□□□ 1.25
PDCD4-203ENST00000444997 CNBD1Q8NA66 436 aa22.83■■□□□ 1.25
PDCD4-203ENST00000444997 BRIP1Q9BX63 1249 aa22.83■■□□□ 1.25
PDCD4-203ENST00000444997 BABAM1Q9NWV8 329 aa22.83■■□□□ 1.25
PDCD4-203ENST00000444997 ADAMTS8Q9UP79 889 aa22.83■■□□□ 1.25
PDCD4-203ENST00000444997 RRP7AQ9Y3A4 280 aaKnown RBP22.83■■□□□ 1.25
PDCD4-203ENST00000444997 ADCY9O60503 1353 aa22.83■■□□□ 1.25
PDCD4-203ENST00000444997 SCN7AQ01118 1682 aa22.83■■□□□ 1.24
PDCD4-203ENST00000444997 RGL2O15211 777 aa22.82■■□□□ 1.24
PDCD4-203ENST00000444997 C1QTNF8P60827 252 aa22.82■■□□□ 1.24
PDCD4-203ENST00000444997 ST5P78524 1137 aa22.82■■□□□ 1.24
PDCD4-203ENST00000444997 PRR5LQ6MZQ0 368 aa22.82■■□□□ 1.24
PDCD4-203ENST00000444997 TTLL6Q8N841 843 aa22.82■■□□□ 1.24
PDCD4-203ENST00000444997 ZNF526Q8TF50 670 aaPredicted RBP22.82■■□□□ 1.24
PDCD4-203ENST00000444997 NRXN2Q9P2S2 1712 aa22.82■■□□□ 1.24
PDCD4-203ENST00000444997 AFDNP55196 1824 aaKnown RBP22.8■■□□□ 1.24
PDCD4-203ENST00000444997 NGEFQ8N5V2 710 aa22.8■■□□□ 1.24
PDCD4-203ENST00000444997 NBPF5PQ86XG9 351 aaPredicted RBP22.79■■□□□ 1.24
PDCD4-203ENST00000444997 KDM3BQ7LBC6 1761 aa22.78■■□□□ 1.24
PDCD4-203ENST00000444997 BRCA1P38398 1863 aaKnown RBP22.78■■□□□ 1.24
PDCD4-203ENST00000444997 KIF6Q6ZMV9 814 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms