RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 SBF1O95248 1867 aa14.72□□□□□ -0.05
HLA-F-221ENST00000444621 TNRC6CQ9HCJ0 1690 aaKnown RBP14.71□□□□□ -0.05
HLA-F-221ENST00000444621 KDM2BQ8NHM5 1336 aa14.71□□□□□ -0.05
HLA-F-221ENST00000444621 TRAPPC3LQ5T215 181 aa14.71□□□□□ -0.05
HLA-F-221ENST00000444621 RSPH6AQ9H0K4 717 aa14.71□□□□□ -0.05
HLA-F-221ENST00000444621 RRAGCQ9HB90 399 aa14.71□□□□□ -0.05
HLA-F-221ENST00000444621 RTCBQ9Y3I0 505 aaKnown RBP14.71□□□□□ -0.05
HLA-F-221ENST00000444621 KCNA3P22001 575 aa14.7□□□□□ -0.06
HLA-F-221ENST00000444621 RC3H1Q5TC82 1133 aaKnown RBP14.7□□□□□ -0.06
HLA-F-221ENST00000444621 VIRMAQ69YN4 1812 aaKnown RBP14.69□□□□□ -0.06
HLA-F-221ENST00000444621 RNF181Q9P0P0 153 aa14.69□□□□□ -0.06
HLA-F-221ENST00000444621 MYBBP1AQ9BQG0 1328 aaKnown RBP14.68□□□□□ -0.06
HLA-F-221ENST00000444621 MAPK8IP3Q9UPT6 1336 aa14.68□□□□□ -0.06
HLA-F-221ENST00000444621 ZNF831Q5JPB2 1677 aa14.68□□□□□ -0.06
HLA-F-221ENST00000444621 GYS1P13807 737 aa14.68□□□□□ -0.06
HLA-F-221ENST00000444621 ARHGEF1Q92888 912 aaKnown RBP14.68□□□□□ -0.06
HLA-F-221ENST00000444621 PARP3Q9Y6F1 533 aa14.68□□□□□ -0.06
HLA-F-221ENST00000444621 COL5A3P25940 1745 aaPredicted RBP14.68□□□□□ -0.06
HLA-F-221ENST00000444621 HTATSF1O43719 755 aaKnown RBP14.67□□□□□ -0.06
HLA-F-221ENST00000444621 HSPA1AP0DMV8 641 aaKnown RBP14.67□□□□□ -0.06
HLA-F-221ENST00000444621 HSPA1BP0DMV9 641 aaKnown RBP14.67□□□□□ -0.06
HLA-F-221ENST00000444621 ADRA2BP18089 450 aa14.67□□□□□ -0.06
HLA-F-221ENST00000444621 RFC4P35249 363 aa14.67□□□□□ -0.06
HLA-F-221ENST00000444621 SMC1BQ8NDV3 1235 aa14.67□□□□□ -0.06
HLA-F-221ENST00000444621 PHACTR3Q96KR7 559 aa14.67□□□□□ -0.06
HLA-F-221ENST00000444621 PIM2Q9P1W9 311 aa14.67□□□□□ -0.06
HLA-F-221ENST00000444621 MYH14Q7Z406 1995 aaKnown RBP14.66□□□□□ -0.06
HLA-F-221ENST00000444621 DALRD3Q5D0E6 543 aaKnown RBP14.66□□□□□ -0.06
HLA-F-221ENST00000444621 NPM2Q86SE8 214 aaKnown RBP14.66□□□□□ -0.06
HLA-F-221ENST00000444621 VSIG10Q8N0Z9 540 aa14.66□□□□□ -0.06
HLA-F-221ENST00000444621 SLC4A9Q96Q91 983 aa14.66□□□□□ -0.06
HLA-F-221ENST00000444621 TEX13AQ9BXU3 409 aaPredicted RBP14.66□□□□□ -0.06
HLA-F-221ENST00000444621 CNTNAP4Q9C0A0 1308 aa14.66□□□□□ -0.06
HLA-F-221ENST00000444621 BTBD11A6QL63 1104 aa14.65□□□□□ -0.06
HLA-F-221ENST00000444621 RPS6KA4O75676 772 aa14.65□□□□□ -0.06
HLA-F-221ENST00000444621 SLC39A6Q13433 755 aa14.65□□□□□ -0.06
HLA-F-221ENST00000444621 WDR43Q15061 677 aaKnown RBP eCLIP14.65□□□□□ -0.06
HLA-F-221ENST00000444621 IL17REQ8NFR9 667 aa14.65□□□□□ -0.06
HLA-F-221ENST00000444621 STARD3NLO95772 234 aa14.64□□□□□ -0.07
HLA-F-221ENST00000444621 CRKLP46109 303 aaKnown RBP14.64□□□□□ -0.07
HLA-F-221ENST00000444621 MRC1P22897 1456 aa14.63□□□□□ -0.07
HLA-F-221ENST00000444621 ZNF316A6NFI3 1004 aaPredicted RBP14.63□□□□□ -0.07
HLA-F-221ENST00000444621 ZNF790Q6PG37 636 aa14.63□□□□□ -0.07
HLA-F-221ENST00000444621 FMNL2Q96PY5 1086 aa14.63□□□□□ -0.07
HLA-F-221ENST00000444621 ZPR1O75312 459 aa14.62□□□□□ -0.07
HLA-F-221ENST00000444621 CHRNA5P30532 468 aa14.62□□□□□ -0.07
HLA-F-221ENST00000444621 CCDC88AQ3V6T2 1871 aa14.62□□□□□ -0.07
HLA-F-221ENST00000444621 ADAMTS7Q9UKP4 1686 aa14.61□□□□□ -0.07
HLA-F-221ENST00000444621 DNAJC10Q8IXB1 793 aa14.61□□□□□ -0.07
HLA-F-221ENST00000444621 PNISRQ8TF01 805 aaKnown RBP14.61□□□□□ -0.07
HLA-F-221ENST00000444621 A0A087WZG4 1122 aa14.6□□□□□ -0.07
HLA-F-221ENST00000444621 RASSF7Q02833 373 aa14.6□□□□□ -0.07
HLA-F-221ENST00000444621 DDR1Q08345 913 aa14.6□□□□□ -0.07
HLA-F-221ENST00000444621 FKBP8Q14318 412 aa14.6□□□□□ -0.07
HLA-F-221ENST00000444621 TAF7Q15545 349 aaPredicted RBP14.6□□□□□ -0.07
HLA-F-221ENST00000444621 NFE2L2Q16236 605 aa14.6□□□□□ -0.07
HLA-F-221ENST00000444621 MCM10Q7L590 875 aa14.6□□□□□ -0.07
HLA-F-221ENST00000444621 PRKRIP1Q9H875 184 aaPredicted RBP14.6□□□□□ -0.07
HLA-F-221ENST00000444621 SRP68Q9UHB9 627 aaKnown RBP14.6□□□□□ -0.07
HLA-F-221ENST00000444621 CEMIPQ8WUJ3 1361 aa14.6□□□□□ -0.07
HLA-F-221ENST00000444621 CYP19A1P11511 503 aaPredicted RBP14.59□□□□□ -0.07
HLA-F-221ENST00000444621 VEGFAP15692 232 aaPredicted RBP14.59□□□□□ -0.07
HLA-F-221ENST00000444621 LMOD3Q0VAK6 560 aa14.59□□□□□ -0.07
HLA-F-221ENST00000444621 TIAM2Q8IVF5 1701 aa14.58□□□□□ -0.07
HLA-F-221ENST00000444621 PLEKHF1Q96S99 279 aa14.58□□□□□ -0.08
HLA-F-221ENST00000444621 ZC3H4Q9UPT8 1303 aaKnown RBP14.58□□□□□ -0.08
HLA-F-221ENST00000444621 HEG1Q9ULI3 1381 aa14.58□□□□□ -0.08
HLA-F-221ENST00000444621 TJP1Q07157 1748 aa14.58□□□□□ -0.08
HLA-F-221ENST00000444621 GLTPD2A6NH11 291 aa14.57□□□□□ -0.08
HLA-F-221ENST00000444621 CANXP27824 592 aaKnown RBP14.57□□□□□ -0.08
HLA-F-221ENST00000444621 RIPK4P57078 832 aa14.57□□□□□ -0.08
HLA-F-221ENST00000444621 INTS5Q6P9B9 1019 aaKnown RBP14.57□□□□□ -0.08
HLA-F-221ENST00000444621 ZNF496Q96IT1 587 aaPredicted RBP14.57□□□□□ -0.08
HLA-F-221ENST00000444621 USP42Q9H9J4 1324 aaKnown RBP14.57□□□□□ -0.08
HLA-F-221ENST00000444621 SIPA1L3O60292 1781 aaPredicted RBP14.57□□□□□ -0.08
HLA-F-221ENST00000444621 ANP32CO43423 234 aa14.56□□□□□ -0.08
HLA-F-221ENST00000444621 SNRPA1P09661 255 aaKnown RBP14.56□□□□□ -0.08
HLA-F-221ENST00000444621 DCTN1Q14203 1278 aa14.56□□□□□ -0.08
HLA-F-221ENST00000444621 AFDNP55196 1824 aaKnown RBP14.56□□□□□ -0.08
HLA-F-221ENST00000444621 UBR2Q8IWV8 1755 aa14.55□□□□□ -0.08
HLA-F-221ENST00000444621 DLEC1Q9Y238 1755 aa14.55□□□□□ -0.08
HLA-F-221ENST00000444621 POLRMTO00411 1230 aaKnown RBP14.55□□□□□ -0.08
HLA-F-221ENST00000444621 LMNB1P20700 586 aa14.55□□□□□ -0.08
HLA-F-221ENST00000444621 RUNDC1Q96C34 613 aa14.55□□□□□ -0.08
HLA-F-221ENST00000444621 ZNF330Q9Y3S2 320 aaPredicted RBP14.55□□□□□ -0.08
HLA-F-221ENST00000444621 DLG5Q8TDM6 1919 aa14.54□□□□□ -0.08
HLA-F-221ENST00000444621 TM4SF1P30408 202 aa14.54□□□□□ -0.08
HLA-F-221ENST00000444621 NARFQ9UHQ1 456 aa14.54□□□□□ -0.08
HLA-F-221ENST00000444621 SOS1Q07889 1333 aaPredicted RBP14.54□□□□□ -0.08
HLA-F-221ENST00000444621 COL15A1P39059 1388 aa14.53□□□□□ -0.08
HLA-F-221ENST00000444621 NEUROD2Q15784 382 aa14.53□□□□□ -0.08
HLA-F-221ENST00000444621 ZBTB1Q9Y2K1 713 aa14.53□□□□□ -0.08
HLA-F-221ENST00000444621 POTECB2RU33 542 aa14.52□□□□□ -0.09
HLA-F-221ENST00000444621 KCNQ3O43525 872 aa14.52□□□□□ -0.09
HLA-F-221ENST00000444621 SLC34A2O95436 690 aa14.52□□□□□ -0.09
HLA-F-221ENST00000444621 IL6STP40189 918 aaPredicted RBP14.52□□□□□ -0.09
HLA-F-221ENST00000444621 TMPOP42166 694 aaKnown RBP14.52□□□□□ -0.09
HLA-F-221ENST00000444621 USPL1Q5W0Q7 1092 aa14.52□□□□□ -0.09
HLA-F-221ENST00000444621 CCDC146Q8IYE0 955 aa14.52□□□□□ -0.09
HLA-F-221ENST00000444621 MKRN1Q9UHC7 482 aaKnown RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms