RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 PRPF40AO75400 957 aaKnown RBP12.71□□□□□ -0.38
TOP3B-210ENST00000444502 GLI2P10070 1586 aa12.71□□□□□ -0.38
TOP3B-210ENST00000444502 ZNF335Q9H4Z2 1342 aaPredicted RBP12.71□□□□□ -0.38
TOP3B-210ENST00000444502 LAMC1P11047 1609 aa12.71□□□□□ -0.38
TOP3B-210ENST00000444502 IL2RBP14784 551 aa12.7□□□□□ -0.38
TOP3B-210ENST00000444502 CEP126Q9P2H0 1117 aa12.7□□□□□ -0.38
TOP3B-210ENST00000444502 CAVIN1Q6NZI2 390 aaKnown RBP12.7□□□□□ -0.38
TOP3B-210ENST00000444502 CWC27Q6UX04 472 aaKnown RBP12.7□□□□□ -0.38
TOP3B-210ENST00000444502 SSFA2P28290 1259 aa12.7□□□□□ -0.38
TOP3B-210ENST00000444502 NBPF6Q5VWK0 638 aa12.7□□□□□ -0.38
TOP3B-210ENST00000444502 PLEKHM2Q8IWE5 1019 aa12.7□□□□□ -0.38
TOP3B-210ENST00000444502 NBPF4Q96M43 638 aa12.7□□□□□ -0.38
TOP3B-210ENST00000444502 PHAXQ9H814 394 aaKnown RBP12.7□□□□□ -0.38
TOP3B-210ENST00000444502 TRMT112Q9UI30 125 aaKnown RBP12.7□□□□□ -0.38
TOP3B-210ENST00000444502 NCBP3Q53F19 620 aaKnown RBP12.7□□□□□ -0.38
TOP3B-210ENST00000444502 ZNF771Q7L3S4 317 aaPredicted RBP12.7□□□□□ -0.38
TOP3B-210ENST00000444502 PPP1R42Q7Z4L9 355 aa12.7□□□□□ -0.38
TOP3B-210ENST00000444502 ZPR1O75312 459 aa12.69□□□□□ -0.38
TOP3B-210ENST00000444502 COPS6Q7L5N1 327 aa12.69□□□□□ -0.38
TOP3B-210ENST00000444502 CBX1P83916 185 aa12.69□□□□□ -0.38
TOP3B-210ENST00000444502 TRDNQ13061 729 aa12.69□□□□□ -0.38
TOP3B-210ENST00000444502 FAM184AQ8NB25 1140 aa12.69□□□□□ -0.38
TOP3B-210ENST00000444502 TNPO1Q92973 898 aaKnown RBP12.69□□□□□ -0.38
TOP3B-210ENST00000444502 ZNF219Q9P2Y4 722 aaPredicted RBP12.69□□□□□ -0.38
TOP3B-210ENST00000444502 VPS37CA5D8V6 355 aaPredicted RBP12.68□□□□□ -0.38
TOP3B-210ENST00000444502 SNRPA1P09661 255 aaKnown RBP12.68□□□□□ -0.38
TOP3B-210ENST00000444502 XAGE3Q8WTP9 111 aa12.68□□□□□ -0.38
TOP3B-210ENST00000444502 LARP6Q9BRS8 491 aaKnown RBP12.68□□□□□ -0.38
TOP3B-210ENST00000444502 LGR6Q9HBX8 967 aa12.68□□□□□ -0.38
TOP3B-210ENST00000444502 WWC3Q9ULE0 1092 aa12.68□□□□□ -0.38
TOP3B-210ENST00000444502 TULP4Q9NRJ4 1543 aa12.68□□□□□ -0.38
TOP3B-210ENST00000444502 AKAP4Q5JQC9 854 aa12.68□□□□□ -0.38
TOP3B-210ENST00000444502 CHMP4CQ96CF2 233 aa12.68□□□□□ -0.38
TOP3B-210ENST00000444502 LMTK2Q8IWU2 1503 aa12.68□□□□□ -0.38
TOP3B-210ENST00000444502 DHX16O60231 1041 aaKnown RBP12.67□□□□□ -0.38
TOP3B-210ENST00000444502 TTC39AQ5SRH9 613 aa12.67□□□□□ -0.38
TOP3B-210ENST00000444502 H3BQV1 296 aa12.67□□□□□ -0.38
TOP3B-210ENST00000444502 PDE1AP54750 535 aa12.67□□□□□ -0.38
TOP3B-210ENST00000444502 IFFO2Q5TF58 517 aa12.67□□□□□ -0.38
TOP3B-210ENST00000444502 RNF20Q5VTR2 975 aa12.67□□□□□ -0.38
TOP3B-210ENST00000444502 CCDC8Q9H0W5 538 aaPredicted RBP12.67□□□□□ -0.38
TOP3B-210ENST00000444502 SMC3Q9UQE7 1217 aa12.67□□□□□ -0.38
TOP3B-210ENST00000444502 A2ML1A8K2U0 1454 aa12.67□□□□□ -0.38
TOP3B-210ENST00000444502 CCDC158Q5M9N0 1113 aa12.67□□□□□ -0.38
TOP3B-210ENST00000444502 SYAP1Q96A49 352 aaPredicted RBP12.67□□□□□ -0.38
TOP3B-210ENST00000444502 HYPKQ9NX55 129 aa12.67□□□□□ -0.38
TOP3B-210ENST00000444502 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.66□□□□□ -0.38
TOP3B-210ENST00000444502 CPLX1O14810 134 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 IGSF3O75054 1194 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 RRP12Q5JTH9 1297 aaKnown RBP12.66□□□□□ -0.38
TOP3B-210ENST00000444502 RNF214Q8ND24 703 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 TBC1D2BQ9UPU7 963 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 IQGAP1P46940 1657 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 NFXL1Q6ZNB6 911 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 RALYLQ86SE5 291 aaKnown RBP12.66□□□□□ -0.38
TOP3B-210ENST00000444502 ERC1Q8IUD2 1116 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 ABCF2Q9UG63 623 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 QRICH2Q9H0J4 1663 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 METTL24Q5JXM2 366 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 VPS53Q5VIR6 699 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 ANKRD13DQ6ZTN6 518 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 KIF1BPQ96EK5 621 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 TRIM34Q9BYJ4 488 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 RASSF8Q8NHQ8 419 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 SIRT1Q96EB6 747 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 BOLA2Q9H3K6 86 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 CGNQ9P2M7 1197 aaKnown RBP12.66□□□□□ -0.38
TOP3B-210ENST00000444502 ATP6V1AP38606 617 aa12.65□□□□□ -0.38
TOP3B-210ENST00000444502 CIZ1Q9ULV3 898 aaPredicted RBP12.65□□□□□ -0.38
TOP3B-210ENST00000444502 FAM98CQ17RN3 349 aaKnown RBP12.65□□□□□ -0.38
TOP3B-210ENST00000444502 SYNE3Q6ZMZ3 975 aa12.65□□□□□ -0.38
TOP3B-210ENST00000444502 SF3A1Q15459 793 aaKnown RBP12.65□□□□□ -0.38
TOP3B-210ENST00000444502 AMOTL1Q8IY63 956 aa12.65□□□□□ -0.38
TOP3B-210ENST00000444502 RIMBP3CA6NJZ7 1639 aa12.64□□□□□ -0.39
TOP3B-210ENST00000444502 RIMBP3BA6NNM3 1639 aa12.64□□□□□ -0.39
TOP3B-210ENST00000444502 RIMBP3Q9UFD9 1639 aa12.64□□□□□ -0.39
TOP3B-210ENST00000444502 IDH1O75874 414 aaKnown RBP12.64□□□□□ -0.39
TOP3B-210ENST00000444502 NASPP49321 788 aaPredicted RBP12.64□□□□□ -0.39
TOP3B-210ENST00000444502 CHAF1AQ13111 956 aaPredicted RBP12.64□□□□□ -0.39
TOP3B-210ENST00000444502 SBNO1A3KN83 1393 aa12.64□□□□□ -0.39
TOP3B-210ENST00000444502 AKAP17AQ02040 695 aaKnown RBP12.64□□□□□ -0.39
TOP3B-210ENST00000444502 DIP2CQ9Y2E4 1556 aa12.64□□□□□ -0.39
TOP3B-210ENST00000444502 NPHP4O75161 1426 aaPredicted RBP12.64□□□□□ -0.39
TOP3B-210ENST00000444502 ALKQ9UM73 1620 aa12.64□□□□□ -0.39
TOP3B-210ENST00000444502 PLEKHG1Q9ULL1 1385 aa12.64□□□□□ -0.39
TOP3B-210ENST00000444502 ATP8B2P98198 1209 aa12.63□□□□□ -0.39
TOP3B-210ENST00000444502 CWF19L2Q2TBE0 894 aaKnown RBP12.63□□□□□ -0.39
TOP3B-210ENST00000444502 IL17REQ8NFR9 667 aa12.63□□□□□ -0.39
TOP3B-210ENST00000444502 ABCC4O15439 1325 aa12.63□□□□□ -0.39
TOP3B-210ENST00000444502 CLSTN1O94985 981 aa12.63□□□□□ -0.39
TOP3B-210ENST00000444502 ZNF853P0CG23 659 aa12.63□□□□□ -0.39
TOP3B-210ENST00000444502 MPNDQ8N594 471 aa12.63□□□□□ -0.39
TOP3B-210ENST00000444502 ZNF652Q9Y2D9 606 aa12.63□□□□□ -0.39
TOP3B-210ENST00000444502 PIK3R4Q99570 1358 aa12.63□□□□□ -0.39
TOP3B-210ENST00000444502 FAM135BQ49AJ0 1406 aa12.63□□□□□ -0.39
TOP3B-210ENST00000444502 SETBP1Q9Y6X0 1596 aa12.63□□□□□ -0.39
TOP3B-210ENST00000444502 SIRT2Q8IXJ6 389 aa12.63□□□□□ -0.39
TOP3B-210ENST00000444502 AK7Q96M32 723 aa12.63□□□□□ -0.39
TOP3B-210ENST00000444502 IGHMBP2P38935 993 aaKnown RBP12.62□□□□□ -0.39
TOP3B-210ENST00000444502 IFIT5Q13325 482 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms