RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 NARFQ9UHQ1 456 aa18.64■□□□□ 0.57
TREX1-202ENST00000444177 BCS1LQ9Y276 419 aa18.64■□□□□ 0.57
TREX1-202ENST00000444177 MYBBP1AQ9BQG0 1328 aaKnown RBP18.64■□□□□ 0.57
TREX1-202ENST00000444177 C4AP0C0L4 1744 aa18.63■□□□□ 0.57
TREX1-202ENST00000444177 KIF13BQ9NQT8 1826 aa18.63■□□□□ 0.57
TREX1-202ENST00000444177 GIGYF1O75420 1035 aaPredicted RBP18.63■□□□□ 0.57
TREX1-202ENST00000444177 FCHSD2O94868 740 aa18.63■□□□□ 0.57
TREX1-202ENST00000444177 KCNA3P22001 575 aa18.63■□□□□ 0.57
TREX1-202ENST00000444177 CANXP27824 592 aaKnown RBP18.63■□□□□ 0.57
TREX1-202ENST00000444177 POLRMTO00411 1230 aaKnown RBP18.62■□□□□ 0.57
TREX1-202ENST00000444177 TEX13AQ9BXU3 409 aaPredicted RBP18.62■□□□□ 0.57
TREX1-202ENST00000444177 ATP10DQ9P241 1426 aa18.62■□□□□ 0.57
TREX1-202ENST00000444177 CEMIPQ8WUJ3 1361 aa18.61■□□□□ 0.57
TREX1-202ENST00000444177 COL15A1P39059 1388 aa18.6■□□□□ 0.57
TREX1-202ENST00000444177 HEG1Q9ULI3 1381 aa18.6■□□□□ 0.57
TREX1-202ENST00000444177 EIF5P55010 431 aaKnown RBP18.6■□□□□ 0.57
TREX1-202ENST00000444177 NFIXQ14938 502 aa18.6■□□□□ 0.57
TREX1-202ENST00000444177 BCL2L12Q9HB09 334 aa18.6■□□□□ 0.57
TREX1-202ENST00000444177 SIPA1L3O60292 1781 aaPredicted RBP18.6■□□□□ 0.57
TREX1-202ENST00000444177 N4BP2Q86UW6 1770 aaPredicted RBP18.6■□□□□ 0.57
TREX1-202ENST00000444177 ADCY9O60503 1353 aa18.59■□□□□ 0.57
TREX1-202ENST00000444177 BTBD11A6QL63 1104 aa18.59■□□□□ 0.57
TREX1-202ENST00000444177 KCNQ3O43525 872 aa18.59■□□□□ 0.57
TREX1-202ENST00000444177 NEFMP07197 916 aa18.59■□□□□ 0.57
TREX1-202ENST00000444177 ARHGAP27Q6ZUM4 889 aa18.59■□□□□ 0.57
TREX1-202ENST00000444177 FMNL2Q96PY5 1086 aa18.59■□□□□ 0.57
TREX1-202ENST00000444177 PIM2Q9P1W9 311 aa18.59■□□□□ 0.57
TREX1-202ENST00000444177 KIAA1551Q9HCM1 1747 aa18.59■□□□□ 0.57
TREX1-202ENST00000444177 UBR2Q8IWV8 1755 aa18.58■□□□□ 0.57
TREX1-202ENST00000444177 A0A087WZG4 1122 aa18.58■□□□□ 0.56
TREX1-202ENST00000444177 ZNF316A6NFI3 1004 aaPredicted RBP18.58■□□□□ 0.56
TREX1-202ENST00000444177 RTF1Q92541 710 aaKnown RBP18.58■□□□□ 0.56
TREX1-202ENST00000444177 GPBP1L1Q9HC44 474 aaPredicted RBP18.58■□□□□ 0.56
TREX1-202ENST00000444177 CHRNA5P30532 468 aa18.57■□□□□ 0.56
TREX1-202ENST00000444177 MCM10Q7L590 875 aa18.57■□□□□ 0.56
TREX1-202ENST00000444177 ZNF526Q8TF50 670 aaPredicted RBP18.57■□□□□ 0.56
TREX1-202ENST00000444177 MAPK8IP3Q9UPT6 1336 aa18.56■□□□□ 0.56
TREX1-202ENST00000444177 HTATSF1O43719 755 aaKnown RBP18.56■□□□□ 0.56
TREX1-202ENST00000444177 A1BGP04217 495 aa18.56■□□□□ 0.56
TREX1-202ENST00000444177 SERPINB2P05120 415 aa18.56■□□□□ 0.56
TREX1-202ENST00000444177 PRKRIP1Q9H875 184 aaPredicted RBP18.56■□□□□ 0.56
TREX1-202ENST00000444177 SENP3-EIF4A1A0A087X0R7 540 aa18.55■□□□□ 0.56
TREX1-202ENST00000444177 IL6STP40189 918 aaPredicted RBP18.55■□□□□ 0.56
TREX1-202ENST00000444177 DCTN1Q14203 1278 aa18.55■□□□□ 0.56
TREX1-202ENST00000444177 DALRD3Q5D0E6 543 aaKnown RBP18.55■□□□□ 0.56
TREX1-202ENST00000444177 TBC1D2BQ9UPU7 963 aa18.55■□□□□ 0.56
TREX1-202ENST00000444177 BICDL1Q6ZP65 573 aa18.54■□□□□ 0.56
TREX1-202ENST00000444177 PNNQ9H307 717 aaKnown RBP18.54■□□□□ 0.56
TREX1-202ENST00000444177 ZNF330Q9Y3S2 320 aaPredicted RBP18.54■□□□□ 0.56
TREX1-202ENST00000444177 USP16Q9Y5T5 823 aa18.54■□□□□ 0.56
TREX1-202ENST00000444177 DLG5Q8TDM6 1919 aa18.53■□□□□ 0.56
TREX1-202ENST00000444177 PLEKHF1Q96S99 279 aa18.53■□□□□ 0.56
TREX1-202ENST00000444177 NPM2Q86SE8 214 aaKnown RBP18.52■□□□□ 0.56
TREX1-202ENST00000444177 SNRPA1P09661 255 aaKnown RBP18.51■□□□□ 0.55
TREX1-202ENST00000444177 WDR43Q15061 677 aaKnown RBP eCLIP18.51■□□□□ 0.55
TREX1-202ENST00000444177 TAF7Q15545 349 aaPredicted RBP18.51■□□□□ 0.55
TREX1-202ENST00000444177 TBC1D9BQ66K14 1250 aa18.51■□□□□ 0.55
TREX1-202ENST00000444177 BRCA1P38398 1863 aaKnown RBP18.5■□□□□ 0.55
TREX1-202ENST00000444177 PRAMEF22A3QJZ6 481 aa18.5■□□□□ 0.55
TREX1-202ENST00000444177 NFE2L2Q16236 605 aa18.5■□□□□ 0.55
TREX1-202ENST00000444177 C9orf131Q5VYM1 1079 aa18.49■□□□□ 0.55
TREX1-202ENST00000444177 CAMTA2O94983 1202 aa18.48■□□□□ 0.55
TREX1-202ENST00000444177 PIP4K2AP48426 406 aaPredicted RBP18.48■□□□□ 0.55
TREX1-202ENST00000444177 C2CD5Q86YS7 1000 aa18.48■□□□□ 0.55
TREX1-202ENST00000444177 MIS18AQ9NYP9 233 aa18.48■□□□□ 0.55
TREX1-202ENST00000444177 AFDNP55196 1824 aaKnown RBP18.48■□□□□ 0.55
TREX1-202ENST00000444177 H0YIN7 160 aa18.47■□□□□ 0.55
TREX1-202ENST00000444177 KIF3CO14782 793 aa18.47■□□□□ 0.55
TREX1-202ENST00000444177 DZIP3Q86Y13 1208 aaKnown RBP18.47■□□□□ 0.55
TREX1-202ENST00000444177 CCDC146Q8IYE0 955 aa18.47■□□□□ 0.55
TREX1-202ENST00000444177 NRXN2Q9P2S2 1712 aa18.46■□□□□ 0.55
TREX1-202ENST00000444177 TTLL6Q8N841 843 aa18.46■□□□□ 0.55
TREX1-202ENST00000444177 SETDB2Q96T68 719 aa18.46■□□□□ 0.55
TREX1-202ENST00000444177 BRIP1Q9BX63 1249 aa18.46■□□□□ 0.55
TREX1-202ENST00000444177 ARFGEF1Q9Y6D6 1849 aa18.46■□□□□ 0.55
TREX1-202ENST00000444177 CARMIL3Q8ND23 1372 aa18.45■□□□□ 0.54
TREX1-202ENST00000444177 PRR5LQ6MZQ0 368 aa18.45■□□□□ 0.54
TREX1-202ENST00000444177 CCDC24Q8N4L8 307 aa18.45■□□□□ 0.54
TREX1-202ENST00000444177 NBPF26B4DH59 902 aa18.44■□□□□ 0.54
TREX1-202ENST00000444177 NBPF10Q6P3W6 841 aaKnown RBP18.44■□□□□ 0.54
TREX1-202ENST00000444177 NBPF15Q8N660 670 aa18.44■□□□□ 0.54
TREX1-202ENST00000444177 PNISRQ8TF01 805 aaKnown RBP18.44■□□□□ 0.54
TREX1-202ENST00000444177 THUMPD2Q9BTF0 503 aaKnown RBP18.44■□□□□ 0.54
TREX1-202ENST00000444177 KDM3BQ7LBC6 1761 aa18.44■□□□□ 0.54
TREX1-202ENST00000444177 PDE6BP35913 854 aa18.43■□□□□ 0.54
TREX1-202ENST00000444177 CLEC4GQ6UXB4 293 aa18.43■□□□□ 0.54
TREX1-202ENST00000444177 RNF181Q9P0P0 153 aa18.43■□□□□ 0.54
TREX1-202ENST00000444177 PDZRN3Q9UPQ7 1066 aa18.43■□□□□ 0.54
TREX1-202ENST00000444177 CEP350Q5VT06 3117 aa18.42■□□□□ 0.54
TREX1-202ENST00000444177 RIPK4P57078 832 aa18.42■□□□□ 0.54
TREX1-202ENST00000444177 TMPOP42166 694 aaKnown RBP18.41■□□□□ 0.54
TREX1-202ENST00000444177 LMOD3Q0VAK6 560 aa18.41■□□□□ 0.54
TREX1-202ENST00000444177 CNBD1Q8NA66 436 aa18.41■□□□□ 0.54
TREX1-202ENST00000444177 ZNF622Q969S3 477 aaKnown RBP eCLIP18.41■□□□□ 0.54
TREX1-202ENST00000444177 RUNDC1Q96C34 613 aa18.41■□□□□ 0.54
TREX1-202ENST00000444177 NMRK2Q9NPI5 230 aa18.41■□□□□ 0.54
TREX1-202ENST00000444177 ADAMTS8Q9UP79 889 aa18.41■□□□□ 0.54
TREX1-202ENST00000444177 RRP7AQ9Y3A4 280 aaKnown RBP18.41■□□□□ 0.54
TREX1-202ENST00000444177 LAMB4A4D0S4 1761 aa18.4■□□□□ 0.54
TREX1-202ENST00000444177 NPHP1O15259 732 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms