RNA–Protein interactions for RNA: ENST00000444092.5

HDLBP-221, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-221ENST00000444092 CHRNA5P30532 468 aa13.58□□□□□ -0.24
HDLBP-221ENST00000444092 CCDC88AQ3V6T2 1871 aa13.58□□□□□ -0.24
HDLBP-221ENST00000444092 UBR2Q8IWV8 1755 aa13.58□□□□□ -0.24
HDLBP-221ENST00000444092 C16orf71Q8IYS4 520 aaPredicted RBP13.57□□□□□ -0.24
HDLBP-221ENST00000444092 TTC5Q8N0Z6 440 aa13.57□□□□□ -0.24
HDLBP-221ENST00000444092 NMRK2Q9NPI5 230 aa13.57□□□□□ -0.24
HDLBP-221ENST00000444092 NARFQ9UHQ1 456 aa13.57□□□□□ -0.24
HDLBP-221ENST00000444092 ZBTB1Q9Y2K1 713 aa13.57□□□□□ -0.24
HDLBP-221ENST00000444092 KCPQ6ZWJ8 1503 aa13.57□□□□□ -0.24
HDLBP-221ENST00000444092 COL15A1P39059 1388 aa13.57□□□□□ -0.24
HDLBP-221ENST00000444092 U2SURPO15042 1029 aaKnown RBP13.56□□□□□ -0.24
HDLBP-221ENST00000444092 PER1O15534 1290 aaPredicted RBP13.56□□□□□ -0.24
HDLBP-221ENST00000444092 APLP1P51693 650 aa13.56□□□□□ -0.24
HDLBP-221ENST00000444092 VSIG10Q8N0Z9 540 aa13.56□□□□□ -0.24
HDLBP-221ENST00000444092 RNF181Q9P0P0 153 aa13.56□□□□□ -0.24
HDLBP-221ENST00000444092 CANXP27824 592 aaKnown RBP13.55□□□□□ -0.24
HDLBP-221ENST00000444092 TEFQ10587 303 aa13.55□□□□□ -0.24
HDLBP-221ENST00000444092 NFIXQ14938 502 aa13.55□□□□□ -0.24
HDLBP-221ENST00000444092 IFFO2Q5TF58 517 aa13.55□□□□□ -0.24
HDLBP-221ENST00000444092 KDM2BQ8NHM5 1336 aa13.55□□□□□ -0.24
HDLBP-221ENST00000444092 NRXN2Q9P2S2 1712 aa13.55□□□□□ -0.24
HDLBP-221ENST00000444092 DLEC1Q9Y238 1755 aa13.55□□□□□ -0.24
HDLBP-221ENST00000444092 STARD3NLO95772 234 aa13.54□□□□□ -0.24
HDLBP-221ENST00000444092 SERPINB2P05120 415 aa13.54□□□□□ -0.24
HDLBP-221ENST00000444092 SIPA1L3O60292 1781 aaPredicted RBP13.53□□□□□ -0.24
HDLBP-221ENST00000444092 GNAT3A8MTJ3 354 aa13.53□□□□□ -0.24
HDLBP-221ENST00000444092 GAS2L2Q8NHY3 880 aa13.53□□□□□ -0.24
HDLBP-221ENST00000444092 TNRC6CQ9HCJ0 1690 aaKnown RBP13.53□□□□□ -0.24
HDLBP-221ENST00000444092 WDR90Q96KV7 1748 aa13.53□□□□□ -0.24
HDLBP-221ENST00000444092 A0A087WZG4 1122 aa13.52□□□□□ -0.25
HDLBP-221ENST00000444092 BICDL1Q6ZP65 573 aa13.52□□□□□ -0.25
HDLBP-221ENST00000444092 NPM2Q86SE8 214 aaKnown RBP13.52□□□□□ -0.25
HDLBP-221ENST00000444092 RBM46Q8TBY0 533 aaKnown RBP13.52□□□□□ -0.25
HDLBP-221ENST00000444092 BCL2L12Q9HB09 334 aa13.52□□□□□ -0.25
HDLBP-221ENST00000444092 ZNF330Q9Y3S2 320 aaPredicted RBP13.52□□□□□ -0.25
HDLBP-221ENST00000444092 COL3A1P02461 1466 aaPredicted RBP13.51□□□□□ -0.25
HDLBP-221ENST00000444092 H0YIN7 160 aa13.51□□□□□ -0.25
HDLBP-221ENST00000444092 ZNF790Q6PG37 636 aa13.51□□□□□ -0.25
HDLBP-221ENST00000444092 TTLL6Q8N841 843 aa13.51□□□□□ -0.25
HDLBP-221ENST00000444092 TEX13AQ9BXU3 409 aaPredicted RBP13.51□□□□□ -0.25
HDLBP-221ENST00000444092 RRAGCQ9HB90 399 aa13.51□□□□□ -0.25
HDLBP-221ENST00000444092 NPC1L1Q9UHC9 1359 aa13.5□□□□□ -0.25
HDLBP-221ENST00000444092 HEG1Q9ULI3 1381 aa13.5□□□□□ -0.25
HDLBP-221ENST00000444092 EIF5P55010 431 aaKnown RBP13.5□□□□□ -0.25
HDLBP-221ENST00000444092 RASSF7Q02833 373 aa13.5□□□□□ -0.25
HDLBP-221ENST00000444092 C2CD5Q86YS7 1000 aa13.5□□□□□ -0.25
HDLBP-221ENST00000444092 IL17REQ8NFR9 667 aa13.5□□□□□ -0.25
HDLBP-221ENST00000444092 ZNF496Q96IT1 587 aaPredicted RBP13.5□□□□□ -0.25
HDLBP-221ENST00000444092 CACNA1SQ13698 1873 aa13.5□□□□□ -0.25
HDLBP-221ENST00000444092 ANKRD31Q8N7Z5 1873 aa13.49□□□□□ -0.25
HDLBP-221ENST00000444092 FSTL1Q12841 308 aa13.49□□□□□ -0.25
HDLBP-221ENST00000444092 CFAP53Q96M91 514 aa13.49□□□□□ -0.25
HDLBP-221ENST00000444092 FMNL2Q96PY5 1086 aa13.49□□□□□ -0.25
HDLBP-221ENST00000444092 TIAM2Q8IVF5 1701 aa13.49□□□□□ -0.25
HDLBP-221ENST00000444092 SCN7AQ01118 1682 aa13.49□□□□□ -0.25
HDLBP-221ENST00000444092 LMNB1P20700 586 aa13.48□□□□□ -0.25
HDLBP-221ENST00000444092 TBC1D2BQ9UPU7 963 aa13.48□□□□□ -0.25
HDLBP-221ENST00000444092 CARMIL3Q8ND23 1372 aa13.47□□□□□ -0.25
HDLBP-221ENST00000444092 DICER1Q9UPY3 1922 aaKnown RBP13.47□□□□□ -0.25
HDLBP-221ENST00000444092 ZC3H4Q9UPT8 1303 aaKnown RBP13.47□□□□□ -0.25
HDLBP-221ENST00000444092 BTBD11A6QL63 1104 aa13.47□□□□□ -0.25
HDLBP-221ENST00000444092 NPHP1O15259 732 aa13.47□□□□□ -0.25
HDLBP-221ENST00000444092 PRKAR2BP31323 418 aa13.47□□□□□ -0.25
HDLBP-221ENST00000444092 IL6STP40189 918 aaPredicted RBP13.47□□□□□ -0.25
HDLBP-221ENST00000444092 TBC1D9BQ66K14 1250 aa13.47□□□□□ -0.25
HDLBP-221ENST00000444092 DNAJC5GQ8N7S2 189 aa13.47□□□□□ -0.25
HDLBP-221ENST00000444092 ZNF622Q969S3 477 aaKnown RBP eCLIP13.47□□□□□ -0.252e-8■□□□□ 8.2
HDLBP-221ENST00000444092 NUDCQ9Y266 331 aa13.47□□□□□ -0.25
HDLBP-221ENST00000444092 A1BGP04217 495 aa13.46□□□□□ -0.25
HDLBP-221ENST00000444092 PDE6BP35913 854 aa13.46□□□□□ -0.25
HDLBP-221ENST00000444092 PDZRN3Q9UPQ7 1066 aa13.46□□□□□ -0.25
HDLBP-221ENST00000444092 FER1L6Q2WGJ9 1857 aa13.45□□□□□ -0.26
HDLBP-221ENST00000444092 HTRA3P83110 453 aa13.45□□□□□ -0.26
HDLBP-221ENST00000444092 PRR5LQ6MZQ0 368 aa13.45□□□□□ -0.26
HDLBP-221ENST00000444092 CCDC24Q8N4L8 307 aa13.45□□□□□ -0.26
HDLBP-221ENST00000444092 SMC1BQ8NDV3 1235 aa13.45□□□□□ -0.26
HDLBP-221ENST00000444092 PHACTR3Q96KR7 559 aa13.45□□□□□ -0.26
HDLBP-221ENST00000444092 SETDB2Q96T68 719 aa13.45□□□□□ -0.26
HDLBP-221ENST00000444092 BRIP1Q9BX63 1249 aa13.45□□□□□ -0.26
HDLBP-221ENST00000444092 ZNF219Q9P2Y4 722 aaPredicted RBP13.45□□□□□ -0.26
HDLBP-221ENST00000444092 BCORQ6W2J9 1755 aa13.45□□□□□ -0.26
HDLBP-221ENST00000444092 COL11A2P13942 1736 aaPredicted RBP13.44□□□□□ -0.26
HDLBP-221ENST00000444092 GLTPD2A6NH11 291 aa13.44□□□□□ -0.26
HDLBP-221ENST00000444092 VEGFAP15692 232 aaPredicted RBP13.44□□□□□ -0.26
HDLBP-221ENST00000444092 RTF1Q92541 710 aaKnown RBP13.44□□□□□ -0.26
HDLBP-221ENST00000444092 RSPH6AQ9H0K4 717 aa13.44□□□□□ -0.26
HDLBP-221ENST00000444092 CEMIPQ8WUJ3 1361 aa13.44□□□□□ -0.26
HDLBP-221ENST00000444092 NFKBIEO00221 500 aa13.43□□□□□ -0.26
HDLBP-221ENST00000444092 KCNQ3O43525 872 aa13.43□□□□□ -0.26
HDLBP-221ENST00000444092 C21orf2O43822 256 aa13.43□□□□□ -0.26
HDLBP-221ENST00000444092 U2AF1L5P0DN76 240 aaPredicted RBP13.43□□□□□ -0.26
HDLBP-221ENST00000444092 PRELPP51888 382 aa13.43□□□□□ -0.26
HDLBP-221ENST00000444092 ST5P78524 1137 aa13.43□□□□□ -0.26
HDLBP-221ENST00000444092 U2AF1Q01081 240 aaKnown RBP eCLIP13.43□□□□□ -0.26
HDLBP-221ENST00000444092 DPY19L2Q6NUT2 758 aa13.43□□□□□ -0.26
HDLBP-221ENST00000444092 DZIP3Q86Y13 1208 aaKnown RBP13.43□□□□□ -0.26
HDLBP-221ENST00000444092 CNBD1Q8NA66 436 aa13.43□□□□□ -0.26
HDLBP-221ENST00000444092 KLRG1Q96E93 195 aa13.43□□□□□ -0.26
HDLBP-221ENST00000444092 SLX4Q8IY92 1834 aa13.42□□□□□ -0.26
HDLBP-221ENST00000444092 CAMTA2O94983 1202 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms