RNA–Protein interactions for RNA: ENST00000443908.5

SF1-210, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-210ENST00000443908 SMARCC1Q92922 1105 aaPredicted RBP17.32■□□□□ 0.36
SF1-210ENST00000443908 AK7Q96M32 723 aa17.32■□□□□ 0.36
SF1-210ENST00000443908 CABP4P57796 275 aa17.31■□□□□ 0.36
SF1-210ENST00000443908 TWISTNBQ3B726 338 aaPredicted RBP17.31■□□□□ 0.36
SF1-210ENST00000443908 PALLDQ8WX93 1383 aa17.3■□□□□ 0.36
SF1-210ENST00000443908 VAMP4O75379 141 aa17.3■□□□□ 0.36
SF1-210ENST00000443908 PHF14O94880 888 aa17.3■□□□□ 0.36
SF1-210ENST00000443908 HOXB7P09629 217 aa17.3■□□□□ 0.36
SF1-210ENST00000443908 RARSP54136 660 aaKnown RBP17.3■□□□□ 0.36
SF1-210ENST00000443908 ALDH1L2Q3SY69 923 aa17.3■□□□□ 0.36
SF1-210ENST00000443908 C8orf58Q8NAV2 365 aa17.3■□□□□ 0.36
SF1-210ENST00000443908 MIS18AQ9NYP9 233 aa17.3■□□□□ 0.36
SF1-210ENST00000443908 SUPT16HQ9Y5B9 1047 aaKnown RBP17.3■□□□□ 0.36
SF1-210ENST00000443908 DOT1LQ8TEK3 1739 aa17.3■□□□□ 0.36
SF1-210ENST00000443908 HEG1Q9ULI3 1381 aa17.29■□□□□ 0.36
SF1-210ENST00000443908 EIF4A1P60842 406 aaKnown RBP17.29■□□□□ 0.36
SF1-210ENST00000443908 NFATC2IPQ8NCF5 419 aa17.29■□□□□ 0.36
SF1-210ENST00000443908 PIGBQ92521 554 aa17.29■□□□□ 0.36
SF1-210ENST00000443908 CD2APQ9Y5K6 639 aa17.29■□□□□ 0.36
SF1-210ENST00000443908 BRPF1P55201 1214 aaPredicted RBP17.28■□□□□ 0.36
SF1-210ENST00000443908 ZNF790Q6PG37 636 aa17.28■□□□□ 0.36
SF1-210ENST00000443908 SMIM5Q71RC9 77 aa17.28■□□□□ 0.36
SF1-210ENST00000443908 TSPYL6Q8N831 410 aa17.28■□□□□ 0.36
SF1-210ENST00000443908 UBR2Q8IWV8 1755 aa17.28■□□□□ 0.36
SF1-210ENST00000443908 RRP1P56182 461 aaKnown RBP17.27■□□□□ 0.36
SF1-210ENST00000443908 CHMP4AQ9BY43 222 aa17.27■□□□□ 0.36
SF1-210ENST00000443908 TMOD3Q9NYL9 352 aa17.27■□□□□ 0.36
SF1-210ENST00000443908 WWC3Q9ULE0 1092 aa17.27■□□□□ 0.36
SF1-210ENST00000443908 ITGB4P16144 1822 aa17.26■□□□□ 0.35
SF1-210ENST00000443908 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.26■□□□□ 0.35
SF1-210ENST00000443908 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.25■□□□□ 0.35
SF1-210ENST00000443908 KRT24Q2M2I5 525 aa17.25■□□□□ 0.35
SF1-210ENST00000443908 KCPQ6ZWJ8 1503 aa17.25■□□□□ 0.35
SF1-210ENST00000443908 LY75O60449 1722 aa17.24■□□□□ 0.35
SF1-210ENST00000443908 KCNQ3O43525 872 aa17.24■□□□□ 0.35
SF1-210ENST00000443908 ATP6V1AP38606 617 aa17.24■□□□□ 0.35
SF1-210ENST00000443908 TTC5Q8N0Z6 440 aa17.24■□□□□ 0.35
SF1-210ENST00000443908 ZNF526Q8TF50 670 aaPredicted RBP17.24■□□□□ 0.35
SF1-210ENST00000443908 SSH1Q8WYL5 1049 aa17.24■□□□□ 0.35
SF1-210ENST00000443908 GPBP1L1Q9HC44 474 aaPredicted RBP17.24■□□□□ 0.35
SF1-210ENST00000443908 QSER1Q2KHR3 1735 aa17.24■□□□□ 0.35
SF1-210ENST00000443908 KIF16BQ96L93 1317 aa17.23■□□□□ 0.35
SF1-210ENST00000443908 LOC102724428A0A0B4J2F2 783 aa17.23■□□□□ 0.35
SF1-210ENST00000443908 BCAR3O75815 825 aa17.23■□□□□ 0.35
SF1-210ENST00000443908 SIK1P57059 783 aa17.23■□□□□ 0.35
SF1-210ENST00000443908 SMC4Q9NTJ3 1288 aa17.23■□□□□ 0.35
SF1-210ENST00000443908 ELL2O00472 640 aaPredicted RBP17.22■□□□□ 0.35
SF1-210ENST00000443908 NEFLP07196 543 aa17.22■□□□□ 0.35
SF1-210ENST00000443908 SLC39A6Q13433 755 aa17.22■□□□□ 0.35
SF1-210ENST00000443908 AMIGO3Q86WK7 504 aa17.22■□□□□ 0.35
SF1-210ENST00000443908 FMNL2Q96PY5 1086 aa17.22■□□□□ 0.35
SF1-210ENST00000443908 ASAP1Q9ULH1 1129 aa17.22■□□□□ 0.35
SF1-210ENST00000443908 GOLGB1Q14789 3259 aaKnown RBP17.22■□□□□ 0.35
SF1-210ENST00000443908 TUBGCP6Q96RT7 1819 aa17.21■□□□□ 0.35
SF1-210ENST00000443908 LAMB4A4D0S4 1761 aa17.21■□□□□ 0.35
SF1-210ENST00000443908 GNPATO15228 680 aa17.21■□□□□ 0.35
SF1-210ENST00000443908 CCDC30Q5VVM6 783 aa17.21■□□□□ 0.35
SF1-210ENST00000443908 LINC00116Q8NCU8 138 aa17.21■□□□□ 0.35
SF1-210ENST00000443908 SSFA2P28290 1259 aa17.2■□□□□ 0.34
SF1-210ENST00000443908 MRPL50Q8N5N7 158 aaKnown RBP17.2■□□□□ 0.34
SF1-210ENST00000443908 ZNF496Q96IT1 587 aaPredicted RBP17.2■□□□□ 0.34
SF1-210ENST00000443908 CICQ96RK0 1608 aaPredicted RBP17.2■□□□□ 0.34
SF1-210ENST00000443908 C5P01031 1676 aa17.2■□□□□ 0.34
SF1-210ENST00000443908 HDGFL1Q5TGJ6 251 aa17.19■□□□□ 0.34
SF1-210ENST00000443908 RBM42Q9BTD8 480 aaKnown RBP17.19■□□□□ 0.34
SF1-210ENST00000443908 BCL2L13Q9BXK5 485 aa17.19■□□□□ 0.34
SF1-210ENST00000443908 ATG3Q9NT62 314 aa17.19■□□□□ 0.34
SF1-210ENST00000443908 SNRPA1P09661 255 aaKnown RBP17.18■□□□□ 0.34
SF1-210ENST00000443908 VSIG10Q8N0Z9 540 aa17.18■□□□□ 0.34
SF1-210ENST00000443908 ARHGAP45Q92619 1136 aa17.18■□□□□ 0.34
SF1-210ENST00000443908 ATP10DQ9P241 1426 aa17.18■□□□□ 0.34
SF1-210ENST00000443908 ZNF831Q5JPB2 1677 aa17.17■□□□□ 0.34
SF1-210ENST00000443908 IPO8O15397 1037 aaKnown RBP17.17■□□□□ 0.34
SF1-210ENST00000443908 ITPK1Q13572 414 aa17.17■□□□□ 0.34
SF1-210ENST00000443908 PDE3AQ14432 1141 aa17.17■□□□□ 0.34
SF1-210ENST00000443908 COL24A1Q17RW2 1714 aa17.17■□□□□ 0.34
SF1-210ENST00000443908 TRAPPC3LQ5T215 181 aa17.17■□□□□ 0.34
SF1-210ENST00000443908 ERICH6BQ5W0A0 696 aa17.17■□□□□ 0.34
SF1-210ENST00000443908 STK31Q9BXU1 1019 aa17.17■□□□□ 0.34
SF1-210ENST00000443908 MS4A1P11836 297 aa17.16■□□□□ 0.34
SF1-210ENST00000443908 ZKSCAN2Q63HK3 967 aa17.16■□□□□ 0.34
SF1-210ENST00000443908 RTCBQ9Y3I0 505 aaKnown RBP17.16■□□□□ 0.34
SF1-210ENST00000443908 CACNA1FO60840 1977 aa17.16■□□□□ 0.34
SF1-210ENST00000443908 ERBB4Q15303 1308 aa17.16■□□□□ 0.34
SF1-210ENST00000443908 MMP10P09238 476 aa17.15■□□□□ 0.34
SF1-210ENST00000443908 CANXP27824 592 aaKnown RBP17.15■□□□□ 0.34
SF1-210ENST00000443908 TEX13AQ9BXU3 409 aaPredicted RBP17.15■□□□□ 0.34
SF1-210ENST00000443908 PTPRCP08575 1304 aa17.15■□□□□ 0.34
SF1-210ENST00000443908 PLIN1O60240 522 aa17.14■□□□□ 0.33
SF1-210ENST00000443908 ATF7IPQ6VMQ6 1270 aa17.14■□□□□ 0.33
SF1-210ENST00000443908 C4BP0C0L5 1744 aa17.13■□□□□ 0.33
SF1-210ENST00000443908 SLC4A2P04920 1241 aa17.13■□□□□ 0.33
SF1-210ENST00000443908 NLGN1Q8N2Q7 840 aa17.13■□□□□ 0.33
SF1-210ENST00000443908 FRAT1Q92837 279 aaPredicted RBP17.13■□□□□ 0.33
SF1-210ENST00000443908 DBF4Q9UBU7 674 aaPredicted RBP17.13■□□□□ 0.33
SF1-210ENST00000443908 NOB1Q9ULX3 412 aaKnown RBP17.13■□□□□ 0.33
SF1-210ENST00000443908 PRAMEF22A3QJZ6 481 aa17.12■□□□□ 0.33
SF1-210ENST00000443908 TRIM27P14373 513 aa17.12■□□□□ 0.33
SF1-210ENST00000443908 EIF2S2P20042 333 aaKnown RBP17.12■□□□□ 0.33
SF1-210ENST00000443908 RFC4P35249 363 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms