RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 TEX13AQ9BXU3 409 aaPredicted RBP27.08■■□□□ 1.93
UBE2D4-205ENST00000443780 MYBBP1AQ9BQG0 1328 aaKnown RBP27.08■■□□□ 1.93
UBE2D4-205ENST00000443780 YBX3P16989 372 aaKnown RBP eCLIP27.07■■□□□ 1.92
UBE2D4-205ENST00000443780 PNNQ9H307 717 aaKnown RBP27.07■■□□□ 1.92
UBE2D4-205ENST00000443780 FKBP8Q14318 412 aa27.06■■□□□ 1.92
UBE2D4-205ENST00000443780 COL15A1P39059 1388 aa27.06■■□□□ 1.92
UBE2D4-205ENST00000443780 KIAA1551Q9HCM1 1747 aa27.05■■□□□ 1.92
UBE2D4-205ENST00000443780 N4BP2Q86UW6 1770 aaPredicted RBP27.05■■□□□ 1.92
UBE2D4-205ENST00000443780 ZPR1O75312 459 aa27.05■■□□□ 1.92
UBE2D4-205ENST00000443780 CANXP27824 592 aaKnown RBP27.05■■□□□ 1.92
UBE2D4-205ENST00000443780 PARP3Q9Y6F1 533 aa27.05■■□□□ 1.92
UBE2D4-205ENST00000443780 GOLGB1Q14789 3259 aaKnown RBP27.04■■□□□ 1.92
UBE2D4-205ENST00000443780 GRIN3BO60391 1043 aa27.03■■□□□ 1.92
UBE2D4-205ENST00000443780 NFE2L2Q16236 605 aa27.03■■□□□ 1.92
UBE2D4-205ENST00000443780 USPL1Q5W0Q7 1092 aa27.03■■□□□ 1.92
UBE2D4-205ENST00000443780 NARFQ9UHQ1 456 aa27.03■■□□□ 1.92
UBE2D4-205ENST00000443780 C10orf71Q711Q0 1435 aa27.02■■□□□ 1.92
UBE2D4-205ENST00000443780 MAPK8IP3Q9UPT6 1336 aa27.02■■□□□ 1.92
UBE2D4-205ENST00000443780 TAF7Q15545 349 aaPredicted RBP27.02■■□□□ 1.92
UBE2D4-205ENST00000443780 EIF5P55010 431 aaKnown RBP27.01■■□□□ 1.91
UBE2D4-205ENST00000443780 AFDNP55196 1824 aaKnown RBP27.01■■□□□ 1.91
UBE2D4-205ENST00000443780 DDR1Q08345 913 aa27■■□□□ 1.91
UBE2D4-205ENST00000443780 KDM3BQ7LBC6 1761 aa26.99■■□□□ 1.91
UBE2D4-205ENST00000443780 TM4SF1P30408 202 aa26.99■■□□□ 1.91
UBE2D4-205ENST00000443780 PXDNLA1KZ92 1463 aa26.99■■□□□ 1.91
UBE2D4-205ENST00000443780 BRCA1P38398 1863 aaKnown RBP26.98■■□□□ 1.91
UBE2D4-205ENST00000443780 TGFB2P61812 414 aa26.98■■□□□ 1.91
UBE2D4-205ENST00000443780 PRKRIP1Q9H875 184 aaPredicted RBP26.98■■□□□ 1.91
UBE2D4-205ENST00000443780 A0A087WZG4 1122 aa26.97■■□□□ 1.91
UBE2D4-205ENST00000443780 A1BGP04217 495 aa26.97■■□□□ 1.91
UBE2D4-205ENST00000443780 IL6STP40189 918 aaPredicted RBP26.97■■□□□ 1.91
UBE2D4-205ENST00000443780 BCL2L12Q9HB09 334 aa26.97■■□□□ 1.91
UBE2D4-205ENST00000443780 WWC3Q9ULE0 1092 aa26.97■■□□□ 1.91
UBE2D4-205ENST00000443780 USP16Q9Y5T5 823 aa26.97■■□□□ 1.91
UBE2D4-205ENST00000443780 POLRMTO00411 1230 aaKnown RBP26.96■■□□□ 1.91
UBE2D4-205ENST00000443780 SNRPA1P09661 255 aaKnown RBP26.96■■□□□ 1.91
UBE2D4-205ENST00000443780 MIS18AQ9NYP9 233 aa26.96■■□□□ 1.91
UBE2D4-205ENST00000443780 PRAMEF22A3QJZ6 481 aa26.95■■□□□ 1.9
UBE2D4-205ENST00000443780 SCN7AQ01118 1682 aa26.95■■□□□ 1.9
UBE2D4-205ENST00000443780 NRXN2Q9P2S2 1712 aa26.94■■□□□ 1.9
UBE2D4-205ENST00000443780 A0A0G2JLW4 131 aa26.94■■□□□ 1.9
UBE2D4-205ENST00000443780 NFIXQ14938 502 aa26.94■■□□□ 1.9
UBE2D4-205ENST00000443780 THUMPD2Q9BTF0 503 aaKnown RBP26.94■■□□□ 1.9
UBE2D4-205ENST00000443780 ZNF330Q9Y3S2 320 aaPredicted RBP26.94■■□□□ 1.9
UBE2D4-205ENST00000443780 PNISRQ8TF01 805 aaKnown RBP26.93■■□□□ 1.9
UBE2D4-205ENST00000443780 LAMB4A4D0S4 1761 aa26.93■■□□□ 1.9
UBE2D4-205ENST00000443780 ZNF784Q8NCA9 323 aaPredicted RBP26.92■■□□□ 1.9
UBE2D4-205ENST00000443780 DPEP1P16444 411 aa26.91■■□□□ 1.9
UBE2D4-205ENST00000443780 RIPK4P57078 832 aa26.91■■□□□ 1.9
UBE2D4-205ENST00000443780 TBC1D2BQ9UPU7 963 aa26.91■■□□□ 1.9
UBE2D4-205ENST00000443780 BCORQ6W2J9 1755 aa26.9■■□□□ 1.9
UBE2D4-205ENST00000443780 TMPOP42166 694 aaKnown RBP26.9■■□□□ 1.9
UBE2D4-205ENST00000443780 WDR43Q15061 677 aaKnown RBP eCLIP26.9■■□□□ 1.9
UBE2D4-205ENST00000443780 NPM2Q86SE8 214 aaKnown RBP26.9■■□□□ 1.9
UBE2D4-205ENST00000443780 ARFGEF1Q9Y6D6 1849 aa26.89■■□□□ 1.9
UBE2D4-205ENST00000443780 PIP4K2AP48426 406 aaPredicted RBP26.88■■□□□ 1.89
UBE2D4-205ENST00000443780 CCDC146Q8IYE0 955 aa26.88■■□□□ 1.89
UBE2D4-205ENST00000443780 SERPINB2P05120 415 aa26.87■■□□□ 1.89
UBE2D4-205ENST00000443780 KCNA3P22001 575 aa26.87■■□□□ 1.89
UBE2D4-205ENST00000443780 ADAMTS8Q9UP79 889 aa26.87■■□□□ 1.89
UBE2D4-205ENST00000443780 EIF4A1P60842 406 aaKnown RBP26.86■■□□□ 1.89
UBE2D4-205ENST00000443780 BICDL1Q6ZP65 573 aa26.86■■□□□ 1.89
UBE2D4-205ENST00000443780 RUNDC1Q96C34 613 aa26.86■■□□□ 1.89
UBE2D4-205ENST00000443780 BCS1LQ9Y276 419 aa26.86■■□□□ 1.89
UBE2D4-205ENST00000443780 NBPF26B4DH59 902 aa26.85■■□□□ 1.89
UBE2D4-205ENST00000443780 CAMTA2O94983 1202 aa26.85■■□□□ 1.89
UBE2D4-205ENST00000443780 LMOD3Q0VAK6 560 aa26.85■■□□□ 1.89
UBE2D4-205ENST00000443780 TBC1D9BQ66K14 1250 aa26.85■■□□□ 1.89
UBE2D4-205ENST00000443780 NBPF10Q6P3W6 841 aaKnown RBP26.85■■□□□ 1.89
UBE2D4-205ENST00000443780 DZIP3Q86Y13 1208 aaKnown RBP26.85■■□□□ 1.89
UBE2D4-205ENST00000443780 NBPF15Q8N660 670 aa26.85■■□□□ 1.89
UBE2D4-205ENST00000443780 GIGYF1O75420 1035 aaPredicted RBP26.84■■□□□ 1.89
UBE2D4-205ENST00000443780 RRP7AQ9Y3A4 280 aaKnown RBP26.84■■□□□ 1.89
UBE2D4-205ENST00000443780 PIM2Q9P1W9 311 aa26.83■■□□□ 1.89
UBE2D4-205ENST00000443780 DLEC1Q9Y238 1755 aa26.82■■□□□ 1.88
UBE2D4-205ENST00000443780 CHRNA5P30532 468 aa26.82■■□□□ 1.88
UBE2D4-205ENST00000443780 ANKRD31Q8N7Z5 1873 aa26.82■■□□□ 1.88
UBE2D4-205ENST00000443780 ZNF316A6NFI3 1004 aaPredicted RBP26.81■■□□□ 1.88
UBE2D4-205ENST00000443780 NEUROD2Q15784 382 aa26.81■■□□□ 1.88
UBE2D4-205ENST00000443780 TSPYL4Q9UJ04 414 aa26.81■■□□□ 1.88
UBE2D4-205ENST00000443780 BABAM1Q9NWV8 329 aa26.79■■□□□ 1.88
UBE2D4-205ENST00000443780 CARMIL3Q8ND23 1372 aa26.79■■□□□ 1.88
UBE2D4-205ENST00000443780 DALRD3Q5D0E6 543 aaKnown RBP26.78■■□□□ 1.88
UBE2D4-205ENST00000443780 SETDB2Q96T68 719 aa26.78■■□□□ 1.88
UBE2D4-205ENST00000443780 TRIM35Q9UPQ4 493 aa26.78■■□□□ 1.88
UBE2D4-205ENST00000443780 NUP98P52948 1817 aa26.77■■□□□ 1.88
UBE2D4-205ENST00000443780 CLEC4GQ6UXB4 293 aa26.77■■□□□ 1.88
UBE2D4-205ENST00000443780 PRR5LQ6MZQ0 368 aa26.75■■□□□ 1.87
UBE2D4-205ENST00000443780 ARHGAP27Q6ZUM4 889 aa26.75■■□□□ 1.87
UBE2D4-205ENST00000443780 ZNF652Q9Y2D9 606 aa26.75■■□□□ 1.87
UBE2D4-205ENST00000443780 ADCY9O60503 1353 aa26.74■■□□□ 1.87
UBE2D4-205ENST00000443780 RGL2O15211 777 aa26.74■■□□□ 1.87
UBE2D4-205ENST00000443780 ATP10DQ9P241 1426 aa26.73■■□□□ 1.87
UBE2D4-205ENST00000443780 SBF1O95248 1867 aa26.72■■□□□ 1.87
UBE2D4-205ENST00000443780 C2CD5Q86YS7 1000 aa26.72■■□□□ 1.87
UBE2D4-205ENST00000443780 BRIP1Q9BX63 1249 aa26.72■■□□□ 1.87
UBE2D4-205ENST00000443780 COL11A2P13942 1736 aaPredicted RBP26.71■■□□□ 1.87
UBE2D4-205ENST00000443780 H0YIN7 160 aa26.71■■□□□ 1.87
UBE2D4-205ENST00000443780 CHL1O00533 1208 aa26.71■■□□□ 1.87
UBE2D4-205ENST00000443780 CCDC24Q8N4L8 307 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms