RNA–Protein interactions for RNA: ENST00000443700.5

AP1S3-206, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best) BASIC

Gene AP1S3, Length 1,785 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-206ENST00000443700 FAM13BQ9NYF5 915 aa18.62■□□□□ 0.57
AP1S3-206ENST00000443700 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.62■□□□□ 0.57
AP1S3-206ENST00000443700 LRRFIP2Q9Y608 721 aaKnown RBP18.62■□□□□ 0.57
AP1S3-206ENST00000443700 USP54Q70EL1 1684 aa18.62■□□□□ 0.57
AP1S3-206ENST00000443700 TMEM2Q9UHN6 1383 aa18.62■□□□□ 0.57
AP1S3-206ENST00000443700 FOXO3O43524 673 aa18.61■□□□□ 0.57
AP1S3-206ENST00000443700 SSH3Q8TE77 659 aa18.61■□□□□ 0.57
AP1S3-206ENST00000443700 UPF3BQ9BZI7 483 aaKnown RBP18.61■□□□□ 0.57
AP1S3-206ENST00000443700 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.61■□□□□ 0.57
AP1S3-206ENST00000443700 TNRQ92752 1358 aa18.61■□□□□ 0.57
AP1S3-206ENST00000443700 PIK3C2AO00443 1686 aa18.61■□□□□ 0.57
AP1S3-206ENST00000443700 ESF1Q9H501 851 aaKnown RBP18.6■□□□□ 0.57
AP1S3-206ENST00000443700 UBE2HP62256 183 aa18.6■□□□□ 0.57
AP1S3-206ENST00000443700 TCHHQ07283 1943 aa18.59■□□□□ 0.57
AP1S3-206ENST00000443700 MAP3K5Q99683 1374 aa18.59■□□□□ 0.57
AP1S3-206ENST00000443700 PLEKHG1Q9ULL1 1385 aa18.59■□□□□ 0.57
AP1S3-206ENST00000443700 GNAT3A8MTJ3 354 aa18.59■□□□□ 0.57
AP1S3-206ENST00000443700 GADD45BO75293 160 aaPredicted RBP18.59■□□□□ 0.57
AP1S3-206ENST00000443700 ZSCAN22P10073 491 aaPredicted RBP18.59■□□□□ 0.57
AP1S3-206ENST00000443700 CNTROBQ8N137 903 aa18.59■□□□□ 0.57
AP1S3-206ENST00000443700 PRIMPOLQ96LW4 560 aa18.59■□□□□ 0.57
AP1S3-206ENST00000443700 CHD2O14647 1828 aaKnown RBP18.59■□□□□ 0.57
AP1S3-206ENST00000443700 SGSM2O43147 1006 aa18.58■□□□□ 0.57
AP1S3-206ENST00000443700 UNC5CLQ8IV45 518 aa18.58■□□□□ 0.57
AP1S3-206ENST00000443700 PIBF1Q8WXW3 757 aa18.58■□□□□ 0.57
AP1S3-206ENST00000443700 AMPHP49418 695 aa18.58■□□□□ 0.56
AP1S3-206ENST00000443700 HMGN5P82970 282 aaKnown RBP18.58■□□□□ 0.56
AP1S3-206ENST00000443700 HSP90AB4PQ58FF6 505 aa18.57■□□□□ 0.56
AP1S3-206ENST00000443700 KIF1BPQ96EK5 621 aa18.57■□□□□ 0.56
AP1S3-206ENST00000443700 TTC14Q96N46 770 aa18.57■□□□□ 0.56
AP1S3-206ENST00000443700 EYA1Q99502 592 aa18.57■□□□□ 0.56
AP1S3-206ENST00000443700 CHMP4AQ9BY43 222 aa18.57■□□□□ 0.56
AP1S3-206ENST00000443700 LIMCH1Q9UPQ0 1083 aa18.57■□□□□ 0.56
AP1S3-206ENST00000443700 POLA2Q14181 598 aa18.56■□□□□ 0.56
AP1S3-206ENST00000443700 MYRIPQ8NFW9 859 aa18.56■□□□□ 0.56
AP1S3-206ENST00000443700 USP44Q9H0E7 712 aa18.56■□□□□ 0.56
AP1S3-206ENST00000443700 SNX14Q9Y5W7 946 aa18.56■□□□□ 0.56
AP1S3-206ENST00000443700 STX6O43752 255 aa18.55■□□□□ 0.56
AP1S3-206ENST00000443700 FAM69CQ0P6D2 419 aa18.55■□□□□ 0.56
AP1S3-206ENST00000443700 MLECQ14165 292 aa18.55■□□□□ 0.56
AP1S3-206ENST00000443700 DNTTIP2Q5QJE6 756 aaKnown RBP18.55■□□□□ 0.56
AP1S3-206ENST00000443700 PI4K2BQ8TCG2 481 aa18.55■□□□□ 0.56
AP1S3-206ENST00000443700 GDPD2Q9HCC8 539 aa18.55■□□□□ 0.56
AP1S3-206ENST00000443700 SMC3Q9UQE7 1217 aa18.55■□□□□ 0.56
AP1S3-206ENST00000443700 F13A1P00488 732 aa18.55■□□□□ 0.56
AP1S3-206ENST00000443700 TPM3P06753 285 aa18.55■□□□□ 0.56
AP1S3-206ENST00000443700 RHPN1Q8TCX5 695 aa18.55■□□□□ 0.56
AP1S3-206ENST00000443700 USP42Q9H9J4 1324 aaKnown RBP18.55■□□□□ 0.56
AP1S3-206ENST00000443700 DIP2AQ14689 1571 aa18.54■□□□□ 0.56
AP1S3-206ENST00000443700 NWD1Q149M9 1564 aa18.54■□□□□ 0.56
AP1S3-206ENST00000443700 SOX12O15370 315 aa18.54■□□□□ 0.56
AP1S3-206ENST00000443700 RUFY2Q8WXA3 655 aa18.54■□□□□ 0.56
AP1S3-206ENST00000443700 LSG1Q9H089 658 aaKnown RBP18.54■□□□□ 0.56
AP1S3-206ENST00000443700 IL1RAPL2Q9NP60 686 aa18.54■□□□□ 0.56
AP1S3-206ENST00000443700 USP25Q9UHP3 1055 aa18.54■□□□□ 0.56
AP1S3-206ENST00000443700 CNPY2Q9Y2B0 182 aa18.54■□□□□ 0.56
AP1S3-206ENST00000443700 TTC41PQ6P2S7 1318 aa18.54■□□□□ 0.56
AP1S3-206ENST00000443700 KDM3BQ7LBC6 1761 aa18.53■□□□□ 0.56
AP1S3-206ENST00000443700 SURF6O75683 361 aaKnown RBP18.53■□□□□ 0.56
AP1S3-206ENST00000443700 PDIA4P13667 645 aaKnown RBP18.53■□□□□ 0.56
AP1S3-206ENST00000443700 AK2P54819 239 aa18.53■□□□□ 0.56
AP1S3-206ENST00000443700 TAF7Q15545 349 aaPredicted RBP18.53■□□□□ 0.56
AP1S3-206ENST00000443700 NUTM1Q86Y26 1132 aa18.53■□□□□ 0.56
AP1S3-206ENST00000443700 MARF1Q9Y4F3 1742 aaKnown RBP18.53■□□□□ 0.56
AP1S3-206ENST00000443700 MED1Q15648 1581 aaPredicted RBP18.53■□□□□ 0.56
AP1S3-206ENST00000443700 ADCY5O95622 1261 aa18.53■□□□□ 0.56
AP1S3-206ENST00000443700 FOXD4L6Q3SYB3 417 aaPredicted RBP18.53■□□□□ 0.56
AP1S3-206ENST00000443700 FOXD4L3Q6VB84 417 aaPredicted RBP18.53■□□□□ 0.56
AP1S3-206ENST00000443700 ZSCAN31Q96LW9 406 aaPredicted RBP18.53■□□□□ 0.56
AP1S3-206ENST00000443700 HDGFL1Q5TGJ6 251 aa18.52■□□□□ 0.55
AP1S3-206ENST00000443700 PPP1R42Q7Z4L9 355 aa18.52■□□□□ 0.55
AP1S3-206ENST00000443700 IL25Q9H293 177 aa18.52■□□□□ 0.55
AP1S3-206ENST00000443700 SH2B1Q9NRF2 756 aaPredicted RBP18.52■□□□□ 0.55
AP1S3-206ENST00000443700 RGPD8O14715 1765 aaPredicted RBP18.51■□□□□ 0.55
AP1S3-206ENST00000443700 SYT1P21579 422 aa18.51■□□□□ 0.55
AP1S3-206ENST00000443700 GTF2F1P35269 517 aaKnown RBP eCLIP18.51■□□□□ 0.55
AP1S3-206ENST00000443700 NOLC1Q14978 699 aaKnown RBP eCLIP18.51■□□□□ 0.55
AP1S3-206ENST00000443700 KDM4AO75164 1064 aa18.5■□□□□ 0.55
AP1S3-206ENST00000443700 GLRX3O76003 335 aaKnown RBP18.5■□□□□ 0.55
AP1S3-206ENST00000443700 HCLS1P14317 486 aaPredicted RBP18.5■□□□□ 0.55
AP1S3-206ENST00000443700 NECTIN2Q92692 538 aa18.5■□□□□ 0.55
AP1S3-206ENST00000443700 SPTLC3Q9NUV7 552 aa18.5■□□□□ 0.55
AP1S3-206ENST00000443700 HOXB7P09629 217 aa18.5■□□□□ 0.55
AP1S3-206ENST00000443700 VPS53Q5VIR6 699 aa18.5■□□□□ 0.55
AP1S3-206ENST00000443700 RUFY3Q7L099 469 aa18.5■□□□□ 0.55
AP1S3-206ENST00000443700 TM6SF1Q9BZW5 370 aa18.5■□□□□ 0.55
AP1S3-206ENST00000443700 NUTM2FA1L443 756 aa18.49■□□□□ 0.55
AP1S3-206ENST00000443700 SRGAP3O43295 1099 aa18.49■□□□□ 0.55
AP1S3-206ENST00000443700 SMAP1Q8IYB5 467 aaPredicted RBP18.49■□□□□ 0.55
AP1S3-206ENST00000443700 DIAPH3Q9NSV4 1193 aa18.49■□□□□ 0.55
AP1S3-206ENST00000443700 ANKARQ7Z5J8 1434 aa18.48■□□□□ 0.55
AP1S3-206ENST00000443700 GOLGA6L6A8MZA4 724 aa18.48■□□□□ 0.55
AP1S3-206ENST00000443700 FIBPO43427 364 aa18.48■□□□□ 0.55
AP1S3-206ENST00000443700 NGDNQ8NEJ9 315 aaKnown RBP18.48■□□□□ 0.55
AP1S3-206ENST00000443700 GPATCH3Q96I76 525 aa18.48■□□□□ 0.55
AP1S3-206ENST00000443700 FUCA2Q9BTY2 467 aa18.48■□□□□ 0.55
AP1S3-206ENST00000443700 MAP4K4O95819 1239 aaPredicted RBP18.47■□□□□ 0.55
AP1S3-206ENST00000443700 CASTP20810 708 aaKnown RBP18.47■□□□□ 0.55
AP1S3-206ENST00000443700 IL17REQ8NFR9 667 aa18.47■□□□□ 0.55
AP1S3-206ENST00000443700 CCDC94Q9BW85 323 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms