RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 CDCA7Q9BWT1 371 aaPredicted RBP18.32■□□□□ 0.52
LINC00299-202ENST00000442956 SRCIN1Q9C0H9 1055 aa18.32■□□□□ 0.52
LINC00299-202ENST00000442956 SPATA31A5Q5VU36 1347 aa18.31■□□□□ 0.52
LINC00299-202ENST00000442956 SPATA31A7Q8IWB4 1347 aa18.31■□□□□ 0.52
LINC00299-202ENST00000442956 GNAI2P04899 355 aa18.31■□□□□ 0.52
LINC00299-202ENST00000442956 NUCB1Q02818 461 aa18.31■□□□□ 0.52
LINC00299-202ENST00000442956 NRAPQ86VF7 1730 aa18.31■□□□□ 0.52
LINC00299-202ENST00000442956 MYL6BP14649 208 aa18.31■□□□□ 0.52
LINC00299-202ENST00000442956 KSR2Q6VAB6 950 aa18.31■□□□□ 0.52
LINC00299-202ENST00000442956 CCDC9Q9Y3X0 531 aaKnown RBP18.31■□□□□ 0.52
LINC00299-202ENST00000442956 C5P01031 1676 aa18.3■□□□□ 0.52
LINC00299-202ENST00000442956 BEND3Q5T5X7 828 aa18.3■□□□□ 0.52
LINC00299-202ENST00000442956 USP44Q9H0E7 712 aa18.3■□□□□ 0.52
LINC00299-202ENST00000442956 TNS2Q63HR2 1409 aa18.3■□□□□ 0.52
LINC00299-202ENST00000442956 PTCD1O75127 700 aaKnown RBP18.29■□□□□ 0.52
LINC00299-202ENST00000442956 AIMP1Q12904 312 aaKnown RBP18.29■□□□□ 0.52
LINC00299-202ENST00000442956 C8orf37Q96NL8 207 aa18.29■□□□□ 0.52
LINC00299-202ENST00000442956 MAP3K2Q9Y2U5 619 aa18.29■□□□□ 0.52
LINC00299-202ENST00000442956 PIGBQ92521 554 aa18.29■□□□□ 0.52
LINC00299-202ENST00000442956 NGLY1Q96IV0 654 aa18.29■□□□□ 0.52
LINC00299-202ENST00000442956 DDX58O95786 925 aaKnown RBP18.28■□□□□ 0.52
LINC00299-202ENST00000442956 CHD1LQ86WJ1 897 aa18.28■□□□□ 0.52
LINC00299-202ENST00000442956 TOGARAM1Q9Y4F4 1720 aa18.28■□□□□ 0.52
LINC00299-202ENST00000442956 FAM161AQ3B820 660 aa18.28■□□□□ 0.52
LINC00299-202ENST00000442956 ANKRD45Q5TZF3 282 aa18.28■□□□□ 0.52
LINC00299-202ENST00000442956 UNC5CLQ8IV45 518 aa18.28■□□□□ 0.52
LINC00299-202ENST00000442956 LNPKQ9C0E8 428 aa18.28■□□□□ 0.52
LINC00299-202ENST00000442956 GLI3P10071 1580 aa18.28■□□□□ 0.52
LINC00299-202ENST00000442956 KCPQ6ZWJ8 1503 aa18.28■□□□□ 0.52
LINC00299-202ENST00000442956 UBTFL1P0CB47 393 aaPredicted RBP18.27■□□□□ 0.52
LINC00299-202ENST00000442956 PIP4K2AP48426 406 aaPredicted RBP18.27■□□□□ 0.52
LINC00299-202ENST00000442956 DDB1Q16531 1140 aa18.27■□□□□ 0.52
LINC00299-202ENST00000442956 DCTPP1Q9H773 170 aa18.27■□□□□ 0.52
LINC00299-202ENST00000442956 LRP10Q7Z4F1 713 aa18.27■□□□□ 0.51
LINC00299-202ENST00000442956 XAGE3Q8WTP9 111 aa18.27■□□□□ 0.51
LINC00299-202ENST00000442956 NWD2Q9ULI1 1742 aa18.26■□□□□ 0.51
LINC00299-202ENST00000442956 COPS6Q7L5N1 327 aa18.26■□□□□ 0.51
LINC00299-202ENST00000442956 SPATA31A6Q5VVP1 1343 aa18.26■□□□□ 0.51
LINC00299-202ENST00000442956 HMMRO75330 724 aa18.26■□□□□ 0.51
LINC00299-202ENST00000442956 C8orf34Q49A92 452 aa18.26■□□□□ 0.51
LINC00299-202ENST00000442956 BARGINQ6ZT62 677 aa18.26■□□□□ 0.51
LINC00299-202ENST00000442956 ASAP1Q9ULH1 1129 aa18.26■□□□□ 0.51
LINC00299-202ENST00000442956 LRRFIP2Q9Y608 721 aaKnown RBP18.26■□□□□ 0.51
LINC00299-202ENST00000442956 N4BP2Q86UW6 1770 aaPredicted RBP18.25■□□□□ 0.51
LINC00299-202ENST00000442956 PAPPAQ13219 1627 aa18.25■□□□□ 0.51
LINC00299-202ENST00000442956 RIC3Q7Z5B4 369 aa18.24■□□□□ 0.51
LINC00299-202ENST00000442956 ATG3Q9NT62 314 aa18.24■□□□□ 0.51
LINC00299-202ENST00000442956 UBR2Q8IWV8 1755 aa18.24■□□□□ 0.51
LINC00299-202ENST00000442956 ERBB4Q15303 1308 aa18.24■□□□□ 0.51
LINC00299-202ENST00000442956 WNK3Q9BYP7 1800 aa18.24■□□□□ 0.51
LINC00299-202ENST00000442956 BCL9LQ86UU0 1499 aa18.24■□□□□ 0.51
LINC00299-202ENST00000442956 ALDH1L1O75891 902 aa18.23■□□□□ 0.51
LINC00299-202ENST00000442956 SYTL4Q96C24 671 aaPredicted RBP18.23■□□□□ 0.51
LINC00299-202ENST00000442956 BCL9O00512 1426 aa18.23■□□□□ 0.51
LINC00299-202ENST00000442956 NBPF7P0C2Y1 421 aaPredicted RBP18.23■□□□□ 0.51
LINC00299-202ENST00000442956 HSPA1LP34931 641 aa18.23■□□□□ 0.51
LINC00299-202ENST00000442956 FNBP4Q8N3X1 1017 aaPredicted RBP18.23■□□□□ 0.51
LINC00299-202ENST00000442956 LINS1Q8NG48 757 aa18.23■□□□□ 0.51
LINC00299-202ENST00000442956 NBPF26B4DH59 902 aa18.22■□□□□ 0.51
LINC00299-202ENST00000442956 VPS72Q15906 364 aa18.22■□□□□ 0.51
LINC00299-202ENST00000442956 CWF19L2Q2TBE0 894 aaKnown RBP18.22■□□□□ 0.51
LINC00299-202ENST00000442956 NBPF14Q5TI25 921 aa18.22■□□□□ 0.51
LINC00299-202ENST00000442956 NBPF10Q6P3W6 841 aaKnown RBP18.22■□□□□ 0.51
LINC00299-202ENST00000442956 NBPF15Q8N660 670 aa18.22■□□□□ 0.51
LINC00299-202ENST00000442956 LRP6O75581 1613 aa18.22■□□□□ 0.51
LINC00299-202ENST00000442956 PRIM1P49642 420 aaKnown RBP18.22■□□□□ 0.51
LINC00299-202ENST00000442956 ATP8B2P98198 1209 aa18.22■□□□□ 0.51
LINC00299-202ENST00000442956 ANKRD13DQ6ZTN6 518 aa18.22■□□□□ 0.51
LINC00299-202ENST00000442956 A1BGP04217 495 aa18.21■□□□□ 0.51
LINC00299-202ENST00000442956 MARCH10Q8NA82 808 aaPredicted RBP18.21■□□□□ 0.51
LINC00299-202ENST00000442956 PNMA6EA0A0J9YXQ4 647 aa18.21■□□□□ 0.51
LINC00299-202ENST00000442956 FAM98CQ17RN3 349 aaKnown RBP18.21■□□□□ 0.51
LINC00299-202ENST00000442956 C9orf78Q9NZ63 289 aaPredicted RBP18.21■□□□□ 0.51
LINC00299-202ENST00000442956 LAMB4A4D0S4 1761 aa18.2■□□□□ 0.5
LINC00299-202ENST00000442956 NEXNQ0ZGT2 675 aa18.2■□□□□ 0.5
LINC00299-202ENST00000442956 VSIG10Q8N0Z9 540 aa18.2■□□□□ 0.5
LINC00299-202ENST00000442956 RBM42Q9BTD8 480 aaKnown RBP18.2■□□□□ 0.5
LINC00299-202ENST00000442956 METTL22Q9BUU2 404 aaPredicted RBP18.2■□□□□ 0.5
LINC00299-202ENST00000442956 IGKV5-2P06315 115 aa18.19■□□□□ 0.5
LINC00299-202ENST00000442956 ZBTB47Q9UFB7 747 aaPredicted RBP18.19■□□□□ 0.5
LINC00299-202ENST00000442956 USP21Q9UK80 565 aa18.19■□□□□ 0.5
LINC00299-202ENST00000442956 APBB1O00213 710 aa18.18■□□□□ 0.5
LINC00299-202ENST00000442956 TEX13AQ9BXU3 409 aaPredicted RBP18.18■□□□□ 0.5
LINC00299-202ENST00000442956 DNAJC10Q8IXB1 793 aa18.18■□□□□ 0.5
LINC00299-202ENST00000442956 MYD88Q99836 296 aa18.18■□□□□ 0.5
LINC00299-202ENST00000442956 PLBD2Q8NHP8 589 aa18.17■□□□□ 0.5
LINC00299-202ENST00000442956 NEURL1BA8MQ27 555 aa18.17■□□□□ 0.5
LINC00299-202ENST00000442956 GRM8O00222 908 aa18.17■□□□□ 0.5
LINC00299-202ENST00000442956 MEX3CQ5U5Q3 659 aaKnown RBP18.17■□□□□ 0.5
LINC00299-202ENST00000442956 PPP1R42Q7Z4L9 355 aa18.17■□□□□ 0.5
LINC00299-202ENST00000442956 ITGB4P16144 1822 aa18.16■□□□□ 0.5
LINC00299-202ENST00000442956 A0A0G2JS52 829 aa18.16■□□□□ 0.5
LINC00299-202ENST00000442956 STARD3NLO95772 234 aa18.16■□□□□ 0.5
LINC00299-202ENST00000442956 ACSBG1Q96GR2 724 aa18.16■□□□□ 0.5
LINC00299-202ENST00000442956 BCL11AQ9H165 835 aa18.16■□□□□ 0.5
LINC00299-202ENST00000442956 EXOC6BQ9Y2D4 811 aa18.16■□□□□ 0.5
LINC00299-202ENST00000442956 TTLL7Q6ZT98 887 aa18.16■□□□□ 0.5
LINC00299-202ENST00000442956 SSH3Q8TE77 659 aa18.16■□□□□ 0.5
LINC00299-202ENST00000442956 HDAC5Q9UQL6 1122 aa18.16■□□□□ 0.5
LINC00299-202ENST00000442956 UTYO14607 1347 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms