RNA–Protein interactions for RNA: ENST00000442691.6

NR1I3-211, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-211ENST00000442691 ATF7IPQ6VMQ6 1270 aa11.61□□□□□ -0.55
NR1I3-211ENST00000442691 C8orf58Q8NAV2 365 aa11.61□□□□□ -0.55
NR1I3-211ENST00000442691 PTPRCP08575 1304 aa11.6□□□□□ -0.55
NR1I3-211ENST00000442691 C19orf67A6NJJ6 358 aa11.6□□□□□ -0.55
NR1I3-211ENST00000442691 BTBD11A6QL63 1104 aa11.6□□□□□ -0.55
NR1I3-211ENST00000442691 VPS72Q15906 364 aa11.6□□□□□ -0.55
NR1I3-211ENST00000442691 CCDC30Q5VVM6 783 aa11.6□□□□□ -0.55
NR1I3-211ENST00000442691 MPRIPQ6WCQ1 1025 aa11.6□□□□□ -0.55
NR1I3-211ENST00000442691 UNC5CLQ8IV45 518 aa11.6□□□□□ -0.55
NR1I3-211ENST00000442691 PELP1Q8IZL8 1130 aaKnown RBP11.6□□□□□ -0.55
NR1I3-211ENST00000442691 MRPL50Q8N5N7 158 aaKnown RBP11.6□□□□□ -0.55
NR1I3-211ENST00000442691 API5Q9BZZ5 524 aaKnown RBP11.6□□□□□ -0.55
NR1I3-211ENST00000442691 LGR6Q9HBX8 967 aa11.6□□□□□ -0.55
NR1I3-211ENST00000442691 BCL9LQ86UU0 1499 aa11.59□□□□□ -0.55
NR1I3-211ENST00000442691 EIF4A1P60842 406 aaKnown RBP11.59□□□□□ -0.55
NR1I3-211ENST00000442691 DZIP1LQ8IYY4 767 aaKnown RBP11.59□□□□□ -0.55
NR1I3-211ENST00000442691 TSPYL6Q8N831 410 aa11.59□□□□□ -0.55
NR1I3-211ENST00000442691 VIRMAQ69YN4 1812 aaKnown RBP11.58□□□□□ -0.56
NR1I3-211ENST00000442691 PAPPAQ13219 1627 aa11.58□□□□□ -0.56
NR1I3-211ENST00000442691 PLIN1O60240 522 aa11.58□□□□□ -0.56
NR1I3-211ENST00000442691 ADAMTS2O95450 1211 aa11.58□□□□□ -0.56
NR1I3-211ENST00000442691 STK31Q9BXU1 1019 aa11.58□□□□□ -0.56
NR1I3-211ENST00000442691 MFRPQ9BY79 579 aa11.58□□□□□ -0.56
NR1I3-211ENST00000442691 PXDNLA1KZ92 1463 aa11.57□□□□□ -0.56
NR1I3-211ENST00000442691 TRIM27P14373 513 aa11.57□□□□□ -0.56
NR1I3-211ENST00000442691 ZNF790Q6PG37 636 aa11.57□□□□□ -0.56
NR1I3-211ENST00000442691 FTSJ3Q8IY81 847 aaKnown RBP11.57□□□□□ -0.56
NR1I3-211ENST00000442691 EFCAB3Q8N7B9 438 aa11.57□□□□□ -0.56
NR1I3-211ENST00000442691 FRAT1Q92837 279 aaPredicted RBP11.57□□□□□ -0.56
NR1I3-211ENST00000442691 DDX19BQ9UMR2 479 aa11.57□□□□□ -0.56
NR1I3-211ENST00000442691 CACNA1FO60840 1977 aa11.57□□□□□ -0.56
NR1I3-211ENST00000442691 ABCC4O15439 1325 aa11.57□□□□□ -0.56
NR1I3-211ENST00000442691 IBTKQ9P2D0 1353 aaPredicted RBP11.56□□□□□ -0.56
NR1I3-211ENST00000442691 NUTM2BA6NNL0 878 aaPredicted RBP11.56□□□□□ -0.56
NR1I3-211ENST00000442691 NUTM2EB1AL46 878 aaPredicted RBP11.56□□□□□ -0.56
NR1I3-211ENST00000442691 EXOC5O00471 708 aa11.56□□□□□ -0.56
NR1I3-211ENST00000442691 HSPA1LP34931 641 aa11.56□□□□□ -0.56
NR1I3-211ENST00000442691 IRX6P78412 446 aaPredicted RBP11.56□□□□□ -0.56
NR1I3-211ENST00000442691 MVPQ14764 893 aaKnown RBP11.56□□□□□ -0.56
NR1I3-211ENST00000442691 NUTM2AQ8IVF1 878 aaPredicted RBP11.56□□□□□ -0.56
NR1I3-211ENST00000442691 EXOC6Q8TAG9 804 aa11.56□□□□□ -0.56
NR1I3-211ENST00000442691 CRBNQ96SW2 442 aa11.56□□□□□ -0.56
NR1I3-211ENST00000442691 NOB1Q9ULX3 412 aaKnown RBP11.56□□□□□ -0.56
NR1I3-211ENST00000442691 ERBB4Q15303 1308 aa11.56□□□□□ -0.56
NR1I3-211ENST00000442691 BCL9O00512 1426 aa11.55□□□□□ -0.56
NR1I3-211ENST00000442691 UBR2Q8IWV8 1755 aa11.55□□□□□ -0.56
NR1I3-211ENST00000442691 CABP4P57796 275 aa11.55□□□□□ -0.56
NR1I3-211ENST00000442691 C20orf194Q5TEA3 1177 aa11.55□□□□□ -0.56
NR1I3-211ENST00000442691 NGLY1Q96IV0 654 aa11.55□□□□□ -0.56
NR1I3-211ENST00000442691 BCL2L13Q9BXK5 485 aa11.55□□□□□ -0.56
NR1I3-211ENST00000442691 GIGYF1O75420 1035 aaPredicted RBP11.54□□□□□ -0.56
NR1I3-211ENST00000442691 HDGFL1Q5TGJ6 251 aa11.54□□□□□ -0.56
NR1I3-211ENST00000442691 TTC5Q8N0Z6 440 aa11.54□□□□□ -0.56
NR1I3-211ENST00000442691 CCDC136Q96JN2 1154 aa11.54□□□□□ -0.56
NR1I3-211ENST00000442691 FMNL2Q96PY5 1086 aa11.54□□□□□ -0.56
NR1I3-211ENST00000442691 MIS18AQ9NYP9 233 aa11.54□□□□□ -0.56
NR1I3-211ENST00000442691 THSD7AQ9UPZ6 1657 aa11.54□□□□□ -0.56
NR1I3-211ENST00000442691 GLI3P10071 1580 aa11.54□□□□□ -0.56
NR1I3-211ENST00000442691 RGS12O14924 1447 aa11.53□□□□□ -0.56
NR1I3-211ENST00000442691 ATRNO75882 1429 aa11.53□□□□□ -0.56
NR1I3-211ENST00000442691 TOGARAM1Q9Y4F4 1720 aa11.53□□□□□ -0.56
NR1I3-211ENST00000442691 ELL2O00472 640 aaPredicted RBP11.53□□□□□ -0.56
NR1I3-211ENST00000442691 DDB1Q16531 1140 aa11.53□□□□□ -0.56
NR1I3-211ENST00000442691 NFATC2IPQ8NCF5 419 aa11.53□□□□□ -0.56
NR1I3-211ENST00000442691 CLUAP1Q96AJ1 413 aa11.53□□□□□ -0.56
NR1I3-211ENST00000442691 DBF4Q9UBU7 674 aaPredicted RBP11.53□□□□□ -0.56
NR1I3-211ENST00000442691 LAMB4A4D0S4 1761 aa11.53□□□□□ -0.56
NR1I3-211ENST00000442691 CICQ96RK0 1608 aaPredicted RBP11.53□□□□□ -0.56
NR1I3-211ENST00000442691 N4BP2Q86UW6 1770 aaPredicted RBP11.52□□□□□ -0.57
NR1I3-211ENST00000442691 KCPQ6ZWJ8 1503 aa11.52□□□□□ -0.57
NR1I3-211ENST00000442691 SNRPA1P09661 255 aaKnown RBP11.52□□□□□ -0.57
NR1I3-211ENST00000442691 KRT24Q2M2I5 525 aa11.52□□□□□ -0.57
NR1I3-211ENST00000442691 INTS3Q68E01 1043 aaKnown RBP11.52□□□□□ -0.57
NR1I3-211ENST00000442691 MS4A3Q96HJ5 214 aa11.52□□□□□ -0.57
NR1I3-211ENST00000442691 C8orf37Q96NL8 207 aa11.52□□□□□ -0.57
NR1I3-211ENST00000442691 USP21Q9UK80 565 aa11.52□□□□□ -0.57
NR1I3-211ENST00000442691 RLBP1P12271 317 aa11.51□□□□□ -0.57
NR1I3-211ENST00000442691 CCT4P50991 539 aaKnown RBP11.51□□□□□ -0.57
NR1I3-211ENST00000442691 MEX3CQ5U5Q3 659 aaKnown RBP11.51□□□□□ -0.57
NR1I3-211ENST00000442691 CENPQQ7L2Z9 268 aaPredicted RBP11.51□□□□□ -0.57
NR1I3-211ENST00000442691 DDX54Q8TDD1 881 aaKnown RBP11.51□□□□□ -0.57
NR1I3-211ENST00000442691 PANK1Q8TE04 598 aa11.51□□□□□ -0.57
NR1I3-211ENST00000442691 TMEM106CQ9BVX2 250 aa11.51□□□□□ -0.57
NR1I3-211ENST00000442691 TEX13AQ9BXU3 409 aaPredicted RBP11.51□□□□□ -0.57
NR1I3-211ENST00000442691 HYPKQ9NX55 129 aa11.51□□□□□ -0.57
NR1I3-211ENST00000442691 TMOD3Q9NYL9 352 aa11.51□□□□□ -0.57
NR1I3-211ENST00000442691 USP35Q9P2H5 1018 aa11.51□□□□□ -0.57
NR1I3-211ENST00000442691 ONECUT3O60422 494 aaPredicted RBP11.5□□□□□ -0.57
NR1I3-211ENST00000442691 FLIIQ13045 1269 aa11.5□□□□□ -0.57
NR1I3-211ENST00000442691 DDX21Q9NR30 783 aaKnown RBP eCLIP11.5□□□□□ -0.57
NR1I3-211ENST00000442691 TRPC5Q9UL62 973 aaPredicted RBP11.5□□□□□ -0.57
NR1I3-211ENST00000442691 COG6Q9Y2V7 657 aa11.5□□□□□ -0.57
NR1I3-211ENST00000442691 ITPRIPQ8IWB1 547 aa11.49□□□□□ -0.57
NR1I3-211ENST00000442691 FBXO22Q8NEZ5 403 aa11.49□□□□□ -0.57
NR1I3-211ENST00000442691 ZNF496Q96IT1 587 aaPredicted RBP11.49□□□□□ -0.57
NR1I3-211ENST00000442691 ZBTB40Q9NUA8 1239 aa11.49□□□□□ -0.57
NR1I3-211ENST00000442691 ATP10DQ9P241 1426 aa11.49□□□□□ -0.57
NR1I3-211ENST00000442691 ZNF831Q5JPB2 1677 aa11.49□□□□□ -0.57
NR1I3-211ENST00000442691 KCNQ3O43525 872 aa11.48□□□□□ -0.57
NR1I3-211ENST00000442691 TMEM57Q8N5G2 664 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms