RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 PIP4K2BP78356 416 aa11.94□□□□□ -0.5
LIN54-202ENST00000442461 SYCP1Q15431 976 aa11.94□□□□□ -0.5
LIN54-202ENST00000442461 IBTKQ9P2D0 1353 aaPredicted RBP11.94□□□□□ -0.5
LIN54-202ENST00000442461 SYT1P21579 422 aa11.94□□□□□ -0.5
LIN54-202ENST00000442461 KRT32Q14532 448 aa11.94□□□□□ -0.5
LIN54-202ENST00000442461 ATP2B3Q16720 1220 aa11.94□□□□□ -0.5
LIN54-202ENST00000442461 HSP90AB2PQ58FF8 381 aa11.94□□□□□ -0.5
LIN54-202ENST00000442461 CUX1P39880 1505 aa11.93□□□□□ -0.5
LIN54-202ENST00000442461 SPECC1Q5M775 1068 aa11.93□□□□□ -0.5
LIN54-202ENST00000442461 CWC27Q6UX04 472 aaKnown RBP11.93□□□□□ -0.5
LIN54-202ENST00000442461 HOMEZQ8IX15 550 aa11.93□□□□□ -0.5
LIN54-202ENST00000442461 ZBTB9Q96C00 473 aa11.93□□□□□ -0.5
LIN54-202ENST00000442461 RNF216Q9NWF9 866 aaPredicted RBP11.93□□□□□ -0.5
LIN54-202ENST00000442461 NDUFAB1O14561 156 aa11.93□□□□□ -0.5
LIN54-202ENST00000442461 E2F4Q16254 413 aa11.93□□□□□ -0.5
LIN54-202ENST00000442461 INTS4Q96HW7 963 aaKnown RBP11.93□□□□□ -0.5
LIN54-202ENST00000442461 VEZTQ9HBM0 779 aa11.93□□□□□ -0.5
LIN54-202ENST00000442461 SPATS2LQ9NUQ6 558 aaKnown RBP11.93□□□□□ -0.5
LIN54-202ENST00000442461 A6NNZ2 444 aa11.93□□□□□ -0.5
LIN54-202ENST00000442461 ARHGAP25P42331 645 aa11.93□□□□□ -0.5
LIN54-202ENST00000442461 TUBB8Q3ZCM7 444 aa11.93□□□□□ -0.5
LIN54-202ENST00000442461 CARD6Q9BX69 1037 aa11.93□□□□□ -0.5
LIN54-202ENST00000442461 ZEB2O60315 1214 aa11.92□□□□□ -0.5
LIN54-202ENST00000442461 IFFO1Q0D2I5 559 aa11.92□□□□□ -0.5
LIN54-202ENST00000442461 MYO1CO00159 1063 aa11.92□□□□□ -0.5
LIN54-202ENST00000442461 ZBTB22O15209 634 aa11.92□□□□□ -0.5
LIN54-202ENST00000442461 F13A1P00488 732 aa11.92□□□□□ -0.5
LIN54-202ENST00000442461 HMOX1P09601 288 aa11.92□□□□□ -0.5
LIN54-202ENST00000442461 ZNF853P0CG23 659 aa11.92□□□□□ -0.5
LIN54-202ENST00000442461 TXLNAP40222 546 aa11.92□□□□□ -0.5
LIN54-202ENST00000442461 CCT4P50991 539 aaKnown RBP11.92□□□□□ -0.5
LIN54-202ENST00000442461 UBASH3AP57075 661 aa11.92□□□□□ -0.5
LIN54-202ENST00000442461 CKAP4Q07065 602 aaKnown RBP11.92□□□□□ -0.5
LIN54-202ENST00000442461 TTC22Q5TAA0 569 aa11.92□□□□□ -0.5
LIN54-202ENST00000442461 NECTIN2Q92692 538 aa11.92□□□□□ -0.5
LIN54-202ENST00000442461 TAF4BQ92750 862 aa11.92□□□□□ -0.5
LIN54-202ENST00000442461 ALDH1L2Q3SY69 923 aa11.92□□□□□ -0.5
LIN54-202ENST00000442461 ARFGAP2Q8N6H7 521 aa11.92□□□□□ -0.5
LIN54-202ENST00000442461 CPLX3Q8WVH0 158 aa11.92□□□□□ -0.5
LIN54-202ENST00000442461 CCDC196A0A1B0GTZ2 297 aa11.91□□□□□ -0.5
LIN54-202ENST00000442461 BIN1O00499 593 aa11.91□□□□□ -0.5
LIN54-202ENST00000442461 ERCC6LQ2NKX8 1250 aa11.91□□□□□ -0.5
LIN54-202ENST00000442461 MAATS1Q7Z4T9 603 aa11.91□□□□□ -0.5
LIN54-202ENST00000442461 NCAPGQ9BPX3 1015 aa11.91□□□□□ -0.5
LIN54-202ENST00000442461 PRDM4Q9UKN5 801 aa11.91□□□□□ -0.5
LIN54-202ENST00000442461 CEP83Q9Y592 693 aa11.91□□□□□ -0.5
LIN54-202ENST00000442461 NPHP3Q7Z494 1330 aa11.91□□□□□ -0.5
LIN54-202ENST00000442461 XBP1P17861 261 aa11.91□□□□□ -0.5
LIN54-202ENST00000442461 ANAPC15P60006 121 aa11.91□□□□□ -0.5
LIN54-202ENST00000442461 SPA17Q15506 151 aa11.91□□□□□ -0.5
LIN54-202ENST00000442461 CNPY4Q8N129 248 aa11.91□□□□□ -0.5
LIN54-202ENST00000442461 NAA15Q9BXJ9 866 aaKnown RBP11.91□□□□□ -0.5
LIN54-202ENST00000442461 ZBTB12Q9Y330 459 aaPredicted RBP11.91□□□□□ -0.5
LIN54-202ENST00000442461 DNM1Q05193 864 aaKnown RBP11.91□□□□□ -0.5
LIN54-202ENST00000442461 STIM1Q13586 685 aa11.91□□□□□ -0.5
LIN54-202ENST00000442461 TSPYL4Q9UJ04 414 aa11.91□□□□□ -0.5
LIN54-202ENST00000442461 A0A0G2JS52 829 aa11.91□□□□□ -0.5
LIN54-202ENST00000442461 RAB11FIP3O75154 756 aa11.91□□□□□ -0.5
LIN54-202ENST00000442461 SSBP05455 408 aaKnown RBP eCLIP11.91□□□□□ -0.5
LIN54-202ENST00000442461 RAD50Q92878 1312 aa11.9□□□□□ -0.5
LIN54-202ENST00000442461 LOC102724159A0A0B4J2E5 919 aa11.9□□□□□ -0.5
LIN54-202ENST00000442461 CTAGE9A4FU28 777 aa11.9□□□□□ -0.5
LIN54-202ENST00000442461 PRKAR2BP31323 418 aa11.9□□□□□ -0.5
LIN54-202ENST00000442461 PWP2Q15269 919 aaKnown RBP11.9□□□□□ -0.5
LIN54-202ENST00000442461 SEPT7Q16181 437 aaKnown RBP11.9□□□□□ -0.5
LIN54-202ENST00000442461 CCAR1Q8IX12 1150 aaKnown RBP11.9□□□□□ -0.5
LIN54-202ENST00000442461 NAIPQ13075 1403 aa11.9□□□□□ -0.5
LIN54-202ENST00000442461 ELP1O95163 1332 aa11.9□□□□□ -0.5
LIN54-202ENST00000442461 SMARCA5O60264 1052 aaPredicted RBP11.9□□□□□ -0.5
LIN54-202ENST00000442461 MAP4K4O95819 1239 aaPredicted RBP11.9□□□□□ -0.5
LIN54-202ENST00000442461 RHOXF2BP0C7M4 288 aa11.9□□□□□ -0.5
LIN54-202ENST00000442461 ARID4AP29374 1257 aaPredicted RBP11.9□□□□□ -0.5
LIN54-202ENST00000442461 HLTFQ14527 1009 aaKnown RBP eCLIP11.9□□□□□ -0.5
LIN54-202ENST00000442461 AOPEPQ8N6M6 819 aa11.9□□□□□ -0.5
LIN54-202ENST00000442461 RHOXF2Q9BQY4 288 aa11.9□□□□□ -0.5
LIN54-202ENST00000442461 DDX41Q9UJV9 622 aaKnown RBP11.9□□□□□ -0.5
LIN54-202ENST00000442461 EIF2S2P20042 333 aaKnown RBP11.9□□□□□ -0.5
LIN54-202ENST00000442461 ACTN2P35609 894 aa11.9□□□□□ -0.5
LIN54-202ENST00000442461 EPS15P42566 896 aa11.9□□□□□ -0.5
LIN54-202ENST00000442461 MCTP2Q6DN12 878 aa11.9□□□□□ -0.5
LIN54-202ENST00000442461 WDR66Q8TBY9 1149 aa11.9□□□□□ -0.5
LIN54-202ENST00000442461 CCDC113Q9H0I3 377 aa11.9□□□□□ -0.5
LIN54-202ENST00000442461 PUF60Q9UHX1 559 aaKnown RBP11.9□□□□□ -0.5
LIN54-202ENST00000442461 ERBINQ96RT1 1412 aa11.9□□□□□ -0.51
LIN54-202ENST00000442461 ZNF75DP51815 510 aa11.89□□□□□ -0.51
LIN54-202ENST00000442461 KLHL34Q8N239 644 aa11.89□□□□□ -0.51
LIN54-202ENST00000442461 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.89□□□□□ -0.51
LIN54-202ENST00000442461 KIAA1107Q9UPP5 1409 aa11.89□□□□□ -0.51
LIN54-202ENST00000442461 MAPKBP1O60336 1514 aa11.89□□□□□ -0.51
LIN54-202ENST00000442461 PRPF40BQ6NWY9 871 aaKnown RBP11.89□□□□□ -0.51
LIN54-202ENST00000442461 EFCAB13Q8IY85 973 aa11.89□□□□□ -0.51
LIN54-202ENST00000442461 SECISBP2LQ93073 1101 aaKnown RBP11.89□□□□□ -0.51
LIN54-202ENST00000442461 GGNBP2Q9H3C7 697 aa11.89□□□□□ -0.51
LIN54-202ENST00000442461 EXOC6BQ9Y2D4 811 aa11.89□□□□□ -0.51
LIN54-202ENST00000442461 USO1O60763 962 aaKnown RBP11.89□□□□□ -0.51
LIN54-202ENST00000442461 YEATS4O95619 227 aa11.89□□□□□ -0.51
LIN54-202ENST00000442461 ANKS4BQ8N8V4 417 aa11.89□□□□□ -0.51
LIN54-202ENST00000442461 LARP6Q9BRS8 491 aaKnown RBP11.89□□□□□ -0.51
LIN54-202ENST00000442461 ERICH2A1L162 156 aa11.89□□□□□ -0.51
LIN54-202ENST00000442461 ATP8B1O43520 1251 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms