RNA–Protein interactions for RNA: ENST00000442241.8

NLE1-202, Transcript of notchless homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLE1, Length 2,588 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-202ENST00000442241 ADGRL3Q9HAR2 1447 aa19.65■□□□□ 0.74
NLE1-202ENST00000442241 RNMTO43148 476 aaKnown RBP19.65■□□□□ 0.74
NLE1-202ENST00000442241 ST18O60284 1047 aa19.65■□□□□ 0.74
NLE1-202ENST00000442241 DTNBO60941 627 aa19.65■□□□□ 0.74
NLE1-202ENST00000442241 NCLP19338 710 aaKnown RBP19.65■□□□□ 0.74
NLE1-202ENST00000442241 SLC39A6Q13433 755 aa19.65■□□□□ 0.74
NLE1-202ENST00000442241 AKAP4Q5JQC9 854 aa19.65■□□□□ 0.74
NLE1-202ENST00000442241 BEND3Q5T5X7 828 aa19.65■□□□□ 0.74
NLE1-202ENST00000442241 ARHGEF25Q86VW2 580 aa19.65■□□□□ 0.74
NLE1-202ENST00000442241 PROSER2Q86WR7 435 aaPredicted RBP19.65■□□□□ 0.74
NLE1-202ENST00000442241 KRT28Q7Z3Y7 464 aa19.65■□□□□ 0.74
NLE1-202ENST00000442241 NAP1L5Q96NT1 182 aaPredicted RBP19.65■□□□□ 0.74
NLE1-202ENST00000442241 MRE11P49959 708 aa19.64■□□□□ 0.73
NLE1-202ENST00000442241 PA2G4Q9UQ80 394 aaKnown RBP19.64■□□□□ 0.73
NLE1-202ENST00000442241 MAP3K2Q9Y2U5 619 aa19.64■□□□□ 0.73
NLE1-202ENST00000442241 PIP4K2AP48426 406 aaPredicted RBP19.64■□□□□ 0.73
NLE1-202ENST00000442241 CABLES1Q8TDN4 633 aa19.64■□□□□ 0.73
NLE1-202ENST00000442241 SSH3Q8TE77 659 aa19.64■□□□□ 0.73
NLE1-202ENST00000442241 LARP6Q9BRS8 491 aaKnown RBP19.64■□□□□ 0.73
NLE1-202ENST00000442241 OS9Q13438 667 aaPredicted RBP19.63■□□□□ 0.73
NLE1-202ENST00000442241 FOXD4L6Q3SYB3 417 aaPredicted RBP19.63■□□□□ 0.73
NLE1-202ENST00000442241 FOXD4L3Q6VB84 417 aaPredicted RBP19.63■□□□□ 0.73
NLE1-202ENST00000442241 RHPN1Q8TCX5 695 aa19.63■□□□□ 0.73
NLE1-202ENST00000442241 ADCY9O60503 1353 aa19.63■□□□□ 0.73
NLE1-202ENST00000442241 GRPEL1Q9HAV7 217 aa19.62■□□□□ 0.73
NLE1-202ENST00000442241 DDX49Q9Y6V7 483 aaKnown RBP19.62■□□□□ 0.73
NLE1-202ENST00000442241 RRP9O43818 475 aaKnown RBP19.61■□□□□ 0.73
NLE1-202ENST00000442241 PKNOX2Q96KN3 472 aa19.61■□□□□ 0.73
NLE1-202ENST00000442241 BABAM1Q9NWV8 329 aa19.61■□□□□ 0.73
NLE1-202ENST00000442241 JARID2Q92833 1246 aaPredicted RBP19.6■□□□□ 0.73
NLE1-202ENST00000442241 ISY1Q9ULR0 285 aaKnown RBP19.6■□□□□ 0.73
NLE1-202ENST00000442241 ZDHHC9Q9Y397 364 aa19.6■□□□□ 0.73
NLE1-202ENST00000442241 NPHP4O75161 1426 aaPredicted RBP19.6■□□□□ 0.73
NLE1-202ENST00000442241 TMX3Q96JJ7 454 aa19.6■□□□□ 0.73
NLE1-202ENST00000442241 NLRP2Q9NX02 1062 aa19.6■□□□□ 0.73
NLE1-202ENST00000442241 C9orf78Q9NZ63 289 aaPredicted RBP19.6■□□□□ 0.73
NLE1-202ENST00000442241 GIGYF1O75420 1035 aaPredicted RBP19.59■□□□□ 0.73
NLE1-202ENST00000442241 MYL6BP14649 208 aa19.59■□□□□ 0.73
NLE1-202ENST00000442241 POLA2Q14181 598 aa19.59■□□□□ 0.73
NLE1-202ENST00000442241 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.59■□□□□ 0.73
NLE1-202ENST00000442241 STAP2Q9UGK3 403 aa19.59■□□□□ 0.73
NLE1-202ENST00000442241 USP54Q70EL1 1684 aa19.58■□□□□ 0.73
NLE1-202ENST00000442241 CHRNA2Q15822 529 aa19.58■□□□□ 0.73
NLE1-202ENST00000442241 PI4K2BQ8TCG2 481 aa19.58■□□□□ 0.73
NLE1-202ENST00000442241 CACNA1FO60840 1977 aa19.58■□□□□ 0.72
NLE1-202ENST00000442241 TPRNQ4KMQ1 711 aa19.58■□□□□ 0.72
NLE1-202ENST00000442241 DBF4Q9UBU7 674 aaPredicted RBP19.58■□□□□ 0.72
NLE1-202ENST00000442241 HSP90AA2PQ14568 343 aaPredicted RBP19.57■□□□□ 0.72
NLE1-202ENST00000442241 CWC27Q6UX04 472 aaKnown RBP19.57■□□□□ 0.72
NLE1-202ENST00000442241 SPG7Q9UQ90 795 aa19.57■□□□□ 0.72
NLE1-202ENST00000442241 RGPD5Q99666 1765 aa19.57■□□□□ 0.72
NLE1-202ENST00000442241 PRPF40AO75400 957 aaKnown RBP19.57■□□□□ 0.72
NLE1-202ENST00000442241 GOLGA6L22H0YM25 854 aa19.56■□□□□ 0.72
NLE1-202ENST00000442241 KLHDC4Q8TBB5 520 aa19.56■□□□□ 0.72
NLE1-202ENST00000442241 RBM27Q9P2N5 1060 aaKnown RBP19.56■□□□□ 0.72
NLE1-202ENST00000442241 CPA1P15085 419 aa19.56■□□□□ 0.72
NLE1-202ENST00000442241 AMOTQ4VCS5 1084 aa19.56■□□□□ 0.72
NLE1-202ENST00000442241 CAVIN1Q6NZI2 390 aaKnown RBP19.56■□□□□ 0.72
NLE1-202ENST00000442241 DDX54Q8TDD1 881 aaKnown RBP19.56■□□□□ 0.72
NLE1-202ENST00000442241 SIL1Q9H173 461 aa19.56■□□□□ 0.72
NLE1-202ENST00000442241 KDM3BQ7LBC6 1761 aa19.55■□□□□ 0.72
NLE1-202ENST00000442241 CYP2E1P05181 493 aaPredicted RBP19.55■□□□□ 0.72
NLE1-202ENST00000442241 TUBGCP6Q96RT7 1819 aa19.55■□□□□ 0.72
NLE1-202ENST00000442241 PXDNLA1KZ92 1463 aa19.55■□□□□ 0.72
NLE1-202ENST00000442241 MED1Q15648 1581 aaPredicted RBP19.55■□□□□ 0.72
NLE1-202ENST00000442241 ESPNB1AK53 854 aa19.55■□□□□ 0.72
NLE1-202ENST00000442241 KIF1BPQ96EK5 621 aa19.55■□□□□ 0.72
NLE1-202ENST00000442241 ERBB4Q15303 1308 aa19.54■□□□□ 0.72
NLE1-202ENST00000442241 NUCB2P80303 420 aa19.54■□□□□ 0.72
NLE1-202ENST00000442241 NFATC2IPQ8NCF5 419 aa19.54■□□□□ 0.72
NLE1-202ENST00000442241 MCCP23508 829 aa19.54■□□□□ 0.72
NLE1-202ENST00000442241 CSB-PGBD3P0DP91 1061 aa19.53■□□□□ 0.72
NLE1-202ENST00000442241 LMBRD1Q9NUN5 540 aa19.53■□□□□ 0.72
NLE1-202ENST00000442241 RAB11FIP3O75154 756 aa19.53■□□□□ 0.72
NLE1-202ENST00000442241 SUCLG2Q96I99 432 aa19.53■□□□□ 0.72
NLE1-202ENST00000442241 NSFL1CQ9UNZ2 370 aaKnown RBP19.53■□□□□ 0.72
NLE1-202ENST00000442241 SKOR2Q2VWA4 1001 aaPredicted RBP19.52■□□□□ 0.72
NLE1-202ENST00000442241 KSR2Q6VAB6 950 aa19.52■□□□□ 0.72
NLE1-202ENST00000442241 LMO7Q8WWI1 1683 aa19.52■□□□□ 0.71
NLE1-202ENST00000442241 ERBB3P21860 1342 aa19.52■□□□□ 0.71
NLE1-202ENST00000442241 HOXB7P09629 217 aa19.51■□□□□ 0.71
NLE1-202ENST00000442241 RASEFQ8IZ41 740 aa19.51■□□□□ 0.71
NLE1-202ENST00000442241 RAPGEF4Q8WZA2 1011 aa19.51■□□□□ 0.71
NLE1-202ENST00000442241 CCDC8Q9H0W5 538 aaPredicted RBP19.51■□□□□ 0.71
NLE1-202ENST00000442241 BICC1Q9H694 974 aaKnown RBP19.51■□□□□ 0.71
NLE1-202ENST00000442241 VSIG10Q8N0Z9 540 aa19.5■□□□□ 0.71
NLE1-202ENST00000442241 KAZALD1Q96I82 304 aa19.5■□□□□ 0.71
NLE1-202ENST00000442241 ZMYND15Q9H091 742 aa19.5■□□□□ 0.71
NLE1-202ENST00000442241 CWC22Q9HCG8 908 aaKnown RBP19.5■□□□□ 0.71
NLE1-202ENST00000442241 RIC3Q7Z5B4 369 aa19.5■□□□□ 0.71
NLE1-202ENST00000442241 GPT2Q8TD30 523 aa19.5■□□□□ 0.71
NLE1-202ENST00000442241 GDPD2Q9HCC8 539 aa19.5■□□□□ 0.71
NLE1-202ENST00000442241 PDIA6Q15084 440 aa19.49■□□□□ 0.71
NLE1-202ENST00000442241 KLHL40Q2TBA0 621 aa19.49■□□□□ 0.71
NLE1-202ENST00000442241 AACSQ86V21 672 aa19.49■□□□□ 0.71
NLE1-202ENST00000442241 TLR7Q9NYK1 1049 aaKnown RBP19.49■□□□□ 0.71
NLE1-202ENST00000442241 C1orf167Q5SNV9 1468 aa19.49■□□□□ 0.71
NLE1-202ENST00000442241 N4BP2Q86UW6 1770 aaPredicted RBP19.49■□□□□ 0.71
NLE1-202ENST00000442241 SGSM2O43147 1006 aa19.48■□□□□ 0.71
NLE1-202ENST00000442241 ZNF790Q6PG37 636 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms