RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 COL15A1P39059 1388 aa25.18■■□□□ 1.62
HMGB3P22-201ENST00000442010 BTBD11A6QL63 1104 aa25.18■■□□□ 1.62
HMGB3P22-201ENST00000442010 AFDNP55196 1824 aaKnown RBP25.17■■□□□ 1.62
HMGB3P22-201ENST00000442010 DCTN1Q14203 1278 aa25.17■■□□□ 1.62
HMGB3P22-201ENST00000442010 RTF1Q92541 710 aaKnown RBP25.17■■□□□ 1.62
HMGB3P22-201ENST00000442010 PXDNLA1KZ92 1463 aa25.16■■□□□ 1.62
HMGB3P22-201ENST00000442010 GRIN3BO60391 1043 aa25.16■■□□□ 1.62
HMGB3P22-201ENST00000442010 FMNL2Q96PY5 1086 aa25.16■■□□□ 1.62
HMGB3P22-201ENST00000442010 NARFQ9UHQ1 456 aa25.16■■□□□ 1.62
HMGB3P22-201ENST00000442010 STARD3NLO95772 234 aa25.15■■□□□ 1.62
HMGB3P22-201ENST00000442010 DDR1Q08345 913 aa25.15■■□□□ 1.62
HMGB3P22-201ENST00000442010 USPL1Q5W0Q7 1092 aa25.15■■□□□ 1.62
HMGB3P22-201ENST00000442010 TEX13AQ9BXU3 409 aaPredicted RBP25.15■■□□□ 1.62
HMGB3P22-201ENST00000442010 PARP3Q9Y6F1 533 aa25.15■■□□□ 1.62
HMGB3P22-201ENST00000442010 TM4SF1P30408 202 aa25.14■■□□□ 1.62
HMGB3P22-201ENST00000442010 EIF5P55010 431 aaKnown RBP25.14■■□□□ 1.62
HMGB3P22-201ENST00000442010 NRXN2Q9P2S2 1712 aa25.14■■□□□ 1.61
HMGB3P22-201ENST00000442010 KDM3BQ7LBC6 1761 aa25.13■■□□□ 1.61
HMGB3P22-201ENST00000442010 ZPR1O75312 459 aa25.13■■□□□ 1.61
HMGB3P22-201ENST00000442010 CANXP27824 592 aaKnown RBP25.13■■□□□ 1.61
HMGB3P22-201ENST00000442010 ZNF784Q8NCA9 323 aaPredicted RBP25.13■■□□□ 1.61
HMGB3P22-201ENST00000442010 BCL2L12Q9HB09 334 aa25.13■■□□□ 1.61
HMGB3P22-201ENST00000442010 MYBBP1AQ9BQG0 1328 aaKnown RBP25.12■■□□□ 1.61
HMGB3P22-201ENST00000442010 TGFB2P61812 414 aa25.12■■□□□ 1.61
HMGB3P22-201ENST00000442010 SCN7AQ01118 1682 aa25.11■■□□□ 1.61
HMGB3P22-201ENST00000442010 POLRMTO00411 1230 aaKnown RBP25.11■■□□□ 1.61
HMGB3P22-201ENST00000442010 NFE2L2Q16236 605 aa25.1■■□□□ 1.61
HMGB3P22-201ENST00000442010 NEFMP07197 916 aa25.09■■□□□ 1.61
HMGB3P22-201ENST00000442010 TAF7Q15545 349 aaPredicted RBP25.09■■□□□ 1.61
HMGB3P22-201ENST00000442010 PNNQ9H307 717 aaKnown RBP25.09■■□□□ 1.61
HMGB3P22-201ENST00000442010 USP16Q9Y5T5 823 aa25.09■■□□□ 1.61
HMGB3P22-201ENST00000442010 PRAMEF22A3QJZ6 481 aa25.08■■□□□ 1.61
HMGB3P22-201ENST00000442010 A1BGP04217 495 aa25.08■■□□□ 1.61
HMGB3P22-201ENST00000442010 IL6STP40189 918 aaPredicted RBP25.08■■□□□ 1.61
HMGB3P22-201ENST00000442010 WWC3Q9ULE0 1092 aa25.08■■□□□ 1.61
HMGB3P22-201ENST00000442010 BCORQ6W2J9 1755 aa25.08■■□□□ 1.6
HMGB3P22-201ENST00000442010 ARFGEF1Q9Y6D6 1849 aa25.07■■□□□ 1.6
HMGB3P22-201ENST00000442010 A0A0G2JLW4 131 aa25.07■■□□□ 1.6
HMGB3P22-201ENST00000442010 NFIXQ14938 502 aa25.07■■□□□ 1.6
HMGB3P22-201ENST00000442010 LAMB4A4D0S4 1761 aa25.07■■□□□ 1.6
HMGB3P22-201ENST00000442010 A0A087WZG4 1122 aa25.06■■□□□ 1.6
HMGB3P22-201ENST00000442010 DPEP1P16444 411 aa25.06■■□□□ 1.6
HMGB3P22-201ENST00000442010 SNRPA1P09661 255 aaKnown RBP25.05■■□□□ 1.6
HMGB3P22-201ENST00000442010 KCNA3P22001 575 aa25.05■■□□□ 1.6
HMGB3P22-201ENST00000442010 MAPK8IP3Q9UPT6 1336 aa25.05■■□□□ 1.6
HMGB3P22-201ENST00000442010 PRKRIP1Q9H875 184 aaPredicted RBP25.04■■□□□ 1.6
HMGB3P22-201ENST00000442010 MIS18AQ9NYP9 233 aa25.04■■□□□ 1.6
HMGB3P22-201ENST00000442010 THUMPD2Q9BTF0 503 aaKnown RBP25.03■■□□□ 1.6
HMGB3P22-201ENST00000442010 ZEB1P37275 1124 aaPredicted RBP25.02■■□□□ 1.6
HMGB3P22-201ENST00000442010 DLEC1Q9Y238 1755 aa25.02■■□□□ 1.6
HMGB3P22-201ENST00000442010 TBC1D2BQ9UPU7 963 aa25.01■■□□□ 1.59
HMGB3P22-201ENST00000442010 PNISRQ8TF01 805 aaKnown RBP25■■□□□ 1.59
HMGB3P22-201ENST00000442010 ANKRD31Q8N7Z5 1873 aa25■■□□□ 1.59
HMGB3P22-201ENST00000442010 CAMTA2O94983 1202 aa24.99■■□□□ 1.59
HMGB3P22-201ENST00000442010 SERPINB2P05120 415 aa24.99■■□□□ 1.59
HMGB3P22-201ENST00000442010 PIP4K2AP48426 406 aaPredicted RBP24.99■■□□□ 1.59
HMGB3P22-201ENST00000442010 ZNF330Q9Y3S2 320 aaPredicted RBP24.99■■□□□ 1.59
HMGB3P22-201ENST00000442010 ADCY9O60503 1353 aa24.98■■□□□ 1.59
HMGB3P22-201ENST00000442010 NBPF26B4DH59 902 aa24.98■■□□□ 1.59
HMGB3P22-201ENST00000442010 TBC1D9BQ66K14 1250 aa24.98■■□□□ 1.59
HMGB3P22-201ENST00000442010 NBPF10Q6P3W6 841 aaKnown RBP24.98■■□□□ 1.59
HMGB3P22-201ENST00000442010 NBPF15Q8N660 670 aa24.98■■□□□ 1.59
HMGB3P22-201ENST00000442010 BCS1LQ9Y276 419 aa24.98■■□□□ 1.59
HMGB3P22-201ENST00000442010 TMPOP42166 694 aaKnown RBP24.97■■□□□ 1.59
HMGB3P22-201ENST00000442010 RIPK4P57078 832 aa24.97■■□□□ 1.59
HMGB3P22-201ENST00000442010 EIF4A1P60842 406 aaKnown RBP24.97■■□□□ 1.59
HMGB3P22-201ENST00000442010 CHRNA5P30532 468 aa24.96■■□□□ 1.59
HMGB3P22-201ENST00000442010 PIM2Q9P1W9 311 aa24.96■■□□□ 1.59
HMGB3P22-201ENST00000442010 CARMIL3Q8ND23 1372 aa24.95■■□□□ 1.59
HMGB3P22-201ENST00000442010 GIGYF1O75420 1035 aaPredicted RBP24.95■■□□□ 1.58
HMGB3P22-201ENST00000442010 BICDL1Q6ZP65 573 aa24.95■■□□□ 1.58
HMGB3P22-201ENST00000442010 DZIP3Q86Y13 1208 aaKnown RBP24.95■■□□□ 1.58
HMGB3P22-201ENST00000442010 CCDC146Q8IYE0 955 aa24.94■■□□□ 1.58
HMGB3P22-201ENST00000442010 NPM2Q86SE8 214 aaKnown RBP24.93■■□□□ 1.58
HMGB3P22-201ENST00000442010 ADAMTS8Q9UP79 889 aa24.93■■□□□ 1.58
HMGB3P22-201ENST00000442010 ATP10DQ9P241 1426 aa24.93■■□□□ 1.58
HMGB3P22-201ENST00000442010 SBF1O95248 1867 aa24.92■■□□□ 1.58
HMGB3P22-201ENST00000442010 RUNDC1Q96C34 613 aa24.92■■□□□ 1.58
HMGB3P22-201ENST00000442010 NUP98P52948 1817 aa24.91■■□□□ 1.58
HMGB3P22-201ENST00000442010 WDR43Q15061 677 aaKnown RBP eCLIP24.91■■□□□ 1.58
HMGB3P22-201ENST00000442010 DALRD3Q5D0E6 543 aaKnown RBP24.91■■□□□ 1.58
HMGB3P22-201ENST00000442010 COL11A2P13942 1736 aaPredicted RBP24.9■■□□□ 1.58
HMGB3P22-201ENST00000442010 CLEC4GQ6UXB4 293 aa24.9■■□□□ 1.58
HMGB3P22-201ENST00000442010 BABAM1Q9NWV8 329 aa24.9■■□□□ 1.58
HMGB3P22-201ENST00000442010 RRP7AQ9Y3A4 280 aaKnown RBP24.9■■□□□ 1.58
HMGB3P22-201ENST00000442010 RGL2O15211 777 aa24.89■■□□□ 1.58
HMGB3P22-201ENST00000442010 LMOD3Q0VAK6 560 aa24.89■■□□□ 1.58
HMGB3P22-201ENST00000442010 PRR5LQ6MZQ0 368 aa24.89■■□□□ 1.58
HMGB3P22-201ENST00000442010 SETDB2Q96T68 719 aa24.88■■□□□ 1.57
HMGB3P22-201ENST00000442010 TSPYL4Q9UJ04 414 aa24.88■■□□□ 1.57
HMGB3P22-201ENST00000442010 TRIM35Q9UPQ4 493 aa24.88■■□□□ 1.57
HMGB3P22-201ENST00000442010 ARHGAP27Q6ZUM4 889 aa24.87■■□□□ 1.57
HMGB3P22-201ENST00000442010 NEUROD2Q15784 382 aa24.85■■□□□ 1.57
HMGB3P22-201ENST00000442010 C2CD5Q86YS7 1000 aa24.85■■□□□ 1.57
HMGB3P22-201ENST00000442010 BRIP1Q9BX63 1249 aa24.85■■□□□ 1.57
HMGB3P22-201ENST00000442010 CCDC24Q8N4L8 307 aa24.84■■□□□ 1.57
HMGB3P22-201ENST00000442010 ZNF652Q9Y2D9 606 aa24.84■■□□□ 1.57
HMGB3P22-201ENST00000442010 CCDC88AQ3V6T2 1871 aa24.83■■□□□ 1.57
HMGB3P22-201ENST00000442010 H0YIN7 160 aa24.83■■□□□ 1.57
HMGB3P22-201ENST00000442010 HLFQ16534 295 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms