RNA–Protein interactions for RNA: ENST00000441460.5

RFTN1-204, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-204ENST00000441460 FMNL2Q96PY5 1086 aa17.93■□□□□ 0.46
RFTN1-204ENST00000441460 PRKRIP1Q9H875 184 aaPredicted RBP17.93■□□□□ 0.46
RFTN1-204ENST00000441460 DLG5Q8TDM6 1919 aa17.93■□□□□ 0.46
RFTN1-204ENST00000441460 PRAMEF22A3QJZ6 481 aa17.92■□□□□ 0.46
RFTN1-204ENST00000441460 STARD3NLO95772 234 aa17.92■□□□□ 0.46
RFTN1-204ENST00000441460 CANXP27824 592 aaKnown RBP17.92■□□□□ 0.46
RFTN1-204ENST00000441460 DDR1Q08345 913 aa17.92■□□□□ 0.46
RFTN1-204ENST00000441460 USPL1Q5W0Q7 1092 aa17.92■□□□□ 0.46
RFTN1-204ENST00000441460 C10orf71Q711Q0 1435 aa17.91■□□□□ 0.46
RFTN1-204ENST00000441460 EIF5P55010 431 aaKnown RBP17.91■□□□□ 0.46
RFTN1-204ENST00000441460 BCL2L12Q9HB09 334 aa17.91■□□□□ 0.46
RFTN1-204ENST00000441460 NARFQ9UHQ1 456 aa17.91■□□□□ 0.46
RFTN1-204ENST00000441460 KIAA1551Q9HCM1 1747 aa17.9■□□□□ 0.46
RFTN1-204ENST00000441460 NEFMP07197 916 aa17.9■□□□□ 0.46
RFTN1-204ENST00000441460 THUMPD2Q9BTF0 503 aaKnown RBP17.9■□□□□ 0.46
RFTN1-204ENST00000441460 TEX13AQ9BXU3 409 aaPredicted RBP17.9■□□□□ 0.46
RFTN1-204ENST00000441460 MIS18AQ9NYP9 233 aa17.9■□□□□ 0.46
RFTN1-204ENST00000441460 WWC3Q9ULE0 1092 aa17.9■□□□□ 0.46
RFTN1-204ENST00000441460 USP16Q9Y5T5 823 aa17.9■□□□□ 0.46
RFTN1-204ENST00000441460 KIF13BQ9NQT8 1826 aa17.9■□□□□ 0.46
RFTN1-204ENST00000441460 PXDNLA1KZ92 1463 aa17.89■□□□□ 0.45
RFTN1-204ENST00000441460 ZPR1O75312 459 aa17.89■□□□□ 0.45
RFTN1-204ENST00000441460 A1BGP04217 495 aa17.89■□□□□ 0.45
RFTN1-204ENST00000441460 TM4SF1P30408 202 aa17.89■□□□□ 0.45
RFTN1-204ENST00000441460 TAF7Q15545 349 aaPredicted RBP17.89■□□□□ 0.45
RFTN1-204ENST00000441460 PNNQ9H307 717 aaKnown RBP17.89■□□□□ 0.45
RFTN1-204ENST00000441460 PARP3Q9Y6F1 533 aa17.89■□□□□ 0.45
RFTN1-204ENST00000441460 MAPK8IP3Q9UPT6 1336 aa17.89■□□□□ 0.45
RFTN1-204ENST00000441460 POLRMTO00411 1230 aaKnown RBP17.88■□□□□ 0.45
RFTN1-204ENST00000441460 CHD4Q14839 1912 aa17.87■□□□□ 0.45
RFTN1-204ENST00000441460 SNRPA1P09661 255 aaKnown RBP17.86■□□□□ 0.45
RFTN1-204ENST00000441460 IL6STP40189 918 aaPredicted RBP17.86■□□□□ 0.45
RFTN1-204ENST00000441460 PIP4K2AP48426 406 aaPredicted RBP17.86■□□□□ 0.45
RFTN1-204ENST00000441460 NFIXQ14938 502 aa17.86■□□□□ 0.45
RFTN1-204ENST00000441460 CCDC146Q8IYE0 955 aa17.86■□□□□ 0.45
RFTN1-204ENST00000441460 A0A0G2JLW4 131 aa17.85■□□□□ 0.45
RFTN1-204ENST00000441460 GRIN3BO60391 1043 aa17.85■□□□□ 0.45
RFTN1-204ENST00000441460 TGFB2P61812 414 aa17.85■□□□□ 0.45
RFTN1-204ENST00000441460 KDM3BQ7LBC6 1761 aa17.85■□□□□ 0.45
RFTN1-204ENST00000441460 N4BP2Q86UW6 1770 aaPredicted RBP17.84■□□□□ 0.45
RFTN1-204ENST00000441460 DPEP1P16444 411 aa17.84■□□□□ 0.45
RFTN1-204ENST00000441460 TMPOP42166 694 aaKnown RBP17.84■□□□□ 0.45
RFTN1-204ENST00000441460 RIPK4P57078 832 aa17.84■□□□□ 0.45
RFTN1-204ENST00000441460 ADAMTS8Q9UP79 889 aa17.84■□□□□ 0.45
RFTN1-204ENST00000441460 TBC1D2BQ9UPU7 963 aa17.84■□□□□ 0.45
RFTN1-204ENST00000441460 ZNF330Q9Y3S2 320 aaPredicted RBP17.84■□□□□ 0.45
RFTN1-204ENST00000441460 A0A087WZG4 1122 aa17.83■□□□□ 0.44
RFTN1-204ENST00000441460 KCNA3P22001 575 aa17.83■□□□□ 0.44
RFTN1-204ENST00000441460 ZNF784Q8NCA9 323 aaPredicted RBP17.83■□□□□ 0.44
RFTN1-204ENST00000441460 RRP7AQ9Y3A4 280 aaKnown RBP17.83■□□□□ 0.44
RFTN1-204ENST00000441460 SCN7AQ01118 1682 aa17.83■□□□□ 0.44
RFTN1-204ENST00000441460 NBPF26B4DH59 902 aa17.82■□□□□ 0.44
RFTN1-204ENST00000441460 CAMTA2O94983 1202 aa17.82■□□□□ 0.44
RFTN1-204ENST00000441460 EIF4A1P60842 406 aaKnown RBP17.82■□□□□ 0.44
RFTN1-204ENST00000441460 NBPF10Q6P3W6 841 aaKnown RBP17.82■□□□□ 0.44
RFTN1-204ENST00000441460 NBPF15Q8N660 670 aa17.82■□□□□ 0.44
RFTN1-204ENST00000441460 NRXN2Q9P2S2 1712 aa17.81■□□□□ 0.44
RFTN1-204ENST00000441460 WDR43Q15061 677 aaKnown RBP eCLIP17.81■□□□□ 0.44
RFTN1-204ENST00000441460 TBC1D9BQ66K14 1250 aa17.81■□□□□ 0.44
RFTN1-204ENST00000441460 PNISRQ8TF01 805 aaKnown RBP17.81■□□□□ 0.44
RFTN1-204ENST00000441460 AFDNP55196 1824 aaKnown RBP17.81■□□□□ 0.44
RFTN1-204ENST00000441460 ZNF316A6NFI3 1004 aaPredicted RBP17.8■□□□□ 0.44
RFTN1-204ENST00000441460 GIGYF1O75420 1035 aaPredicted RBP17.8■□□□□ 0.44
RFTN1-204ENST00000441460 SERPINB2P05120 415 aa17.8■□□□□ 0.44
RFTN1-204ENST00000441460 BICDL1Q6ZP65 573 aa17.8■□□□□ 0.44
RFTN1-204ENST00000441460 RUNDC1Q96C34 613 aa17.8■□□□□ 0.44
RFTN1-204ENST00000441460 BRCA1P38398 1863 aaKnown RBP17.8■□□□□ 0.44
RFTN1-204ENST00000441460 CHRNA5P30532 468 aa17.79■□□□□ 0.44
RFTN1-204ENST00000441460 NEUROD2Q15784 382 aa17.79■□□□□ 0.44
RFTN1-204ENST00000441460 CCDC184Q52MB2 194 aa17.79■□□□□ 0.44
RFTN1-204ENST00000441460 TRIM35Q9UPQ4 493 aa17.79■□□□□ 0.44
RFTN1-204ENST00000441460 CARMIL3Q8ND23 1372 aa17.79■□□□□ 0.44
RFTN1-204ENST00000441460 DZIP3Q86Y13 1208 aaKnown RBP17.78■□□□□ 0.44
RFTN1-204ENST00000441460 BCS1LQ9Y276 419 aa17.78■□□□□ 0.44
RFTN1-204ENST00000441460 LAMB4A4D0S4 1761 aa17.78■□□□□ 0.44
RFTN1-204ENST00000441460 BCORQ6W2J9 1755 aa17.78■□□□□ 0.44
RFTN1-204ENST00000441460 TSPYL4Q9UJ04 414 aa17.77■□□□□ 0.44
RFTN1-204ENST00000441460 LMOD3Q0VAK6 560 aa17.76■□□□□ 0.43
RFTN1-204ENST00000441460 NPM2Q86SE8 214 aaKnown RBP17.75■□□□□ 0.43
RFTN1-204ENST00000441460 PRR5LQ6MZQ0 368 aa17.74■□□□□ 0.43
RFTN1-204ENST00000441460 BABAM1Q9NWV8 329 aa17.74■□□□□ 0.43
RFTN1-204ENST00000441460 PIM2Q9P1W9 311 aa17.74■□□□□ 0.43
RFTN1-204ENST00000441460 CCDC24Q8N4L8 307 aa17.73■□□□□ 0.43
RFTN1-204ENST00000441460 ADCY9O60503 1353 aa17.73■□□□□ 0.43
RFTN1-204ENST00000441460 CHL1O00533 1208 aa17.72■□□□□ 0.43
RFTN1-204ENST00000441460 HLFQ16534 295 aa17.72■□□□□ 0.43
RFTN1-204ENST00000441460 CLEC4GQ6UXB4 293 aa17.72■□□□□ 0.43
RFTN1-204ENST00000441460 SETDB2Q96T68 719 aa17.72■□□□□ 0.43
RFTN1-204ENST00000441460 ANKRD31Q8N7Z5 1873 aa17.71■□□□□ 0.43
RFTN1-204ENST00000441460 APAF1O14727 1248 aa17.71■□□□□ 0.43
RFTN1-204ENST00000441460 KRT24Q2M2I5 525 aa17.71■□□□□ 0.43
RFTN1-204ENST00000441460 DALRD3Q5D0E6 543 aaKnown RBP17.71■□□□□ 0.43
RFTN1-204ENST00000441460 NGEFQ8N5V2 710 aa17.71■□□□□ 0.43
RFTN1-204ENST00000441460 ARFGEF1Q9Y6D6 1849 aa17.7■□□□□ 0.42
RFTN1-204ENST00000441460 MYL6BP14649 208 aa17.7■□□□□ 0.42
RFTN1-204ENST00000441460 PDIA6Q15084 440 aa17.7■□□□□ 0.42
RFTN1-204ENST00000441460 TTLL7Q6ZT98 887 aa17.7■□□□□ 0.42
RFTN1-204ENST00000441460 LRP10Q7Z4F1 713 aa17.7■□□□□ 0.42
RFTN1-204ENST00000441460 ATP10DQ9P241 1426 aa17.7■□□□□ 0.42
RFTN1-204ENST00000441460 DLEC1Q9Y238 1755 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms