RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 KRT24Q2M2I5 525 aa14.44□□□□□ -0.1
LTBR-203ENST00000441074 RNF214Q8ND24 703 aa14.44□□□□□ -0.1
LTBR-203ENST00000441074 LRRC59Q96AG4 307 aaKnown RBP14.44□□□□□ -0.1
LTBR-203ENST00000441074 GTPBP4Q9BZE4 634 aaKnown RBP14.44□□□□□ -0.1
LTBR-203ENST00000441074 HAP1P54257 671 aaPredicted RBP14.44□□□□□ -0.1
LTBR-203ENST00000441074 DCTPP1Q9H773 170 aa14.44□□□□□ -0.1
LTBR-203ENST00000441074 MBIPQ9NS73 344 aa14.44□□□□□ -0.1
LTBR-203ENST00000441074 TWISTNBQ3B726 338 aaPredicted RBP14.43□□□□□ -0.1
LTBR-203ENST00000441074 DNTTIP2Q5QJE6 756 aaKnown RBP14.43□□□□□ -0.1
LTBR-203ENST00000441074 CASC1Q6TDU7 716 aa14.43□□□□□ -0.1
LTBR-203ENST00000441074 PIBF1Q8WXW3 757 aa14.43□□□□□ -0.1
LTBR-203ENST00000441074 ZNF710Q8N1W2 664 aa14.43□□□□□ -0.1
LTBR-203ENST00000441074 SYAP1Q96A49 352 aaPredicted RBP14.43□□□□□ -0.1
LTBR-203ENST00000441074 AXIN2Q9Y2T1 843 aa14.43□□□□□ -0.1
LTBR-203ENST00000441074 HSPA1LP34931 641 aa14.42□□□□□ -0.1
LTBR-203ENST00000441074 UVSSAQ2YD98 709 aa14.42□□□□□ -0.1
LTBR-203ENST00000441074 KIF1AQ12756 1690 aa14.42□□□□□ -0.1
LTBR-203ENST00000441074 NBPF6Q5VWK0 638 aa14.42□□□□□ -0.1
LTBR-203ENST00000441074 NBPF4Q96M43 638 aa14.42□□□□□ -0.1
LTBR-203ENST00000441074 DLG5Q8TDM6 1919 aa14.41□□□□□ -0.1
LTBR-203ENST00000441074 REC8O95072 547 aa14.41□□□□□ -0.1
LTBR-203ENST00000441074 NOLC1Q14978 699 aaKnown RBP eCLIP14.41□□□□□ -0.1
LTBR-203ENST00000441074 CHAMP1Q96JM3 812 aa14.41□□□□□ -0.1
LTBR-203ENST00000441074 SOS2Q07890 1332 aaPredicted RBP14.41□□□□□ -0.1
LTBR-203ENST00000441074 PHF14O94880 888 aa14.41□□□□□ -0.1
LTBR-203ENST00000441074 BRD1O95696 1058 aa14.41□□□□□ -0.1
LTBR-203ENST00000441074 FAM184AQ8NB25 1140 aa14.41□□□□□ -0.1
LTBR-203ENST00000441074 KIF20AO95235 890 aa14.4□□□□□ -0.1
LTBR-203ENST00000441074 SDSP20132 328 aa14.4□□□□□ -0.1
LTBR-203ENST00000441074 C8orf58Q8NAV2 365 aa14.4□□□□□ -0.1
LTBR-203ENST00000441074 IGSF1Q8N6C5 1336 aa14.4□□□□□ -0.1
LTBR-203ENST00000441074 PXDNQ92626 1479 aa14.39□□□□□ -0.11
LTBR-203ENST00000441074 C16orf71Q8IYS4 520 aaPredicted RBP14.39□□□□□ -0.11
LTBR-203ENST00000441074 SPTLC3Q9NUV7 552 aa14.39□□□□□ -0.11
LTBR-203ENST00000441074 KIF3AQ9Y496 699 aa14.39□□□□□ -0.11
LTBR-203ENST00000441074 NHSL1Q5SYE7 1610 aa14.39□□□□□ -0.11
LTBR-203ENST00000441074 A0A0U1RQG5 324 aaPredicted RBP14.38□□□□□ -0.11
LTBR-203ENST00000441074 MCM2P49736 904 aa14.38□□□□□ -0.11
LTBR-203ENST00000441074 IP6K1Q92551 441 aa14.38□□□□□ -0.11
LTBR-203ENST00000441074 AHDC1Q5TGY3 1603 aaPredicted RBP14.38□□□□□ -0.11
LTBR-203ENST00000441074 PHLPP1O60346 1717 aa14.38□□□□□ -0.11
LTBR-203ENST00000441074 LETM1O95202 739 aaPredicted RBP14.38□□□□□ -0.11
LTBR-203ENST00000441074 JARID2Q92833 1246 aaPredicted RBP14.38□□□□□ -0.11
LTBR-203ENST00000441074 TMX3Q96JJ7 454 aa14.38□□□□□ -0.11
LTBR-203ENST00000441074 ERC2O15083 957 aa14.37□□□□□ -0.11
LTBR-203ENST00000441074 CBX1P83916 185 aa14.37□□□□□ -0.11
LTBR-203ENST00000441074 CUL4AQ13619 759 aa14.37□□□□□ -0.11
LTBR-203ENST00000441074 CHRNA2Q15822 529 aa14.37□□□□□ -0.11
LTBR-203ENST00000441074 PPP4R3BQ5MIZ7 849 aa14.37□□□□□ -0.11
LTBR-203ENST00000441074 FOXD4L5Q5VV16 416 aaPredicted RBP14.37□□□□□ -0.11
LTBR-203ENST00000441074 ARHGEF25Q86VW2 580 aa14.37□□□□□ -0.11
LTBR-203ENST00000441074 FOXD4L4Q8WXT5 416 aaPredicted RBP14.37□□□□□ -0.11
LTBR-203ENST00000441074 TSC1Q92574 1164 aa14.37□□□□□ -0.11
LTBR-203ENST00000441074 SPATA31A3Q5VYP0 1347 aa14.37□□□□□ -0.11
LTBR-203ENST00000441074 MARF1Q9Y4F3 1742 aaKnown RBP14.37□□□□□ -0.11
LTBR-203ENST00000441074 FKBP5Q13451 457 aaPredicted RBP14.37□□□□□ -0.11
LTBR-203ENST00000441074 RPAP2Q8IXW5 612 aaPredicted RBP14.36□□□□□ -0.11
LTBR-203ENST00000441074 ANKRD44Q8N8A2 993 aa14.36□□□□□ -0.11
LTBR-203ENST00000441074 KCNH5Q8NCM2 988 aa14.36□□□□□ -0.11
LTBR-203ENST00000441074 ATP10DQ9P241 1426 aa14.36□□□□□ -0.11
LTBR-203ENST00000441074 ARHGEF10O15013 1369 aa14.36□□□□□ -0.11
LTBR-203ENST00000441074 ATP2B3Q16720 1220 aa14.36□□□□□ -0.11
LTBR-203ENST00000441074 INTS4Q96HW7 963 aaKnown RBP14.36□□□□□ -0.11
LTBR-203ENST00000441074 OTUD7AQ8TE49 926 aaPredicted RBP14.35□□□□□ -0.11
LTBR-203ENST00000441074 ZNF830Q96NB3 372 aaPredicted RBP14.35□□□□□ -0.11
LTBR-203ENST00000441074 KDRP35968 1356 aa14.35□□□□□ -0.11
LTBR-203ENST00000441074 KIAA0232Q92628 1395 aa14.35□□□□□ -0.11
LTBR-203ENST00000441074 PTPRCP08575 1304 aa14.35□□□□□ -0.11
LTBR-203ENST00000441074 NEK4P51957 841 aa14.35□□□□□ -0.11
LTBR-203ENST00000441074 COL16A1Q07092 1604 aaPredicted RBP14.35□□□□□ -0.11
LTBR-203ENST00000441074 TNS3Q68CZ2 1445 aa14.34□□□□□ -0.11
LTBR-203ENST00000441074 NFAT5O94916 1531 aa14.34□□□□□ -0.11
LTBR-203ENST00000441074 ANKRD24Q8TF21 1146 aa14.34□□□□□ -0.11
LTBR-203ENST00000441074 BCL2L12Q9HB09 334 aa14.34□□□□□ -0.11
LTBR-203ENST00000441074 RGS12O14924 1447 aa14.34□□□□□ -0.11
LTBR-203ENST00000441074 ADCY5O95622 1261 aa14.33□□□□□ -0.11
LTBR-203ENST00000441074 ILDR1Q86SU0 546 aaPredicted RBP14.33□□□□□ -0.11
LTBR-203ENST00000441074 RTF1Q92541 710 aaKnown RBP14.33□□□□□ -0.11
LTBR-203ENST00000441074 TTC12Q9H892 705 aaPredicted RBP14.33□□□□□ -0.11
LTBR-203ENST00000441074 USP25Q9UHP3 1055 aa14.33□□□□□ -0.11
LTBR-203ENST00000441074 TRPM3Q9HCF6 1732 aaPredicted RBP14.33□□□□□ -0.12
LTBR-203ENST00000441074 IL17REQ8NFR9 667 aa14.33□□□□□ -0.12
LTBR-203ENST00000441074 PDCL2Q8N4E4 241 aa14.32□□□□□ -0.12
LTBR-203ENST00000441074 DIAPH3Q9NSV4 1193 aa14.32□□□□□ -0.12
LTBR-203ENST00000441074 GADD45BO75293 160 aaPredicted RBP14.32□□□□□ -0.12
LTBR-203ENST00000441074 CHL1O00533 1208 aa14.31□□□□□ -0.12
LTBR-203ENST00000441074 FGD1P98174 961 aa14.31□□□□□ -0.12
LTBR-203ENST00000441074 CCDC183Q5T5S1 534 aa14.31□□□□□ -0.12
LTBR-203ENST00000441074 CEP85Q6P2H3 762 aa14.31□□□□□ -0.12
LTBR-203ENST00000441074 USP48Q86UV5 1035 aa14.31□□□□□ -0.12
LTBR-203ENST00000441074 KLHL34Q8N239 644 aa14.31□□□□□ -0.12
LTBR-203ENST00000441074 MPNDQ8N594 471 aa14.31□□□□□ -0.12
LTBR-203ENST00000441074 NECTIN2Q92692 538 aa14.31□□□□□ -0.12
LTBR-203ENST00000441074 LGR6Q9HBX8 967 aa14.31□□□□□ -0.12
LTBR-203ENST00000441074 RGPD1P0DJD0 1748 aa14.31□□□□□ -0.12
LTBR-203ENST00000441074 C17orf53Q8N3J3 647 aaPredicted RBP14.31□□□□□ -0.12
LTBR-203ENST00000441074 TMEM87AQ8NBN3 555 aa14.31□□□□□ -0.12
LTBR-203ENST00000441074 ANKRD7Q92527 254 aa14.31□□□□□ -0.12
LTBR-203ENST00000441074 RTL1A6NKG5 1358 aa14.3□□□□□ -0.12
LTBR-203ENST00000441074 JCADQ9P266 1359 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms