RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 STARD3NLO95772 234 aa15.62■□□□□ 0.09
UBE2D4-204ENST00000440899 IL17REQ8NFR9 667 aa15.62■□□□□ 0.09
UBE2D4-204ENST00000440899 CFAP53Q96M91 514 aa15.62■□□□□ 0.09
UBE2D4-204ENST00000440899 ZBTB1Q9Y2K1 713 aa15.62■□□□□ 0.09
UBE2D4-204ENST00000440899 ADAMTS7Q9UKP4 1686 aa15.62■□□□□ 0.09
UBE2D4-204ENST00000440899 COL15A1P39059 1388 aa15.62■□□□□ 0.09
UBE2D4-204ENST00000440899 DALRD3Q5D0E6 543 aaKnown RBP15.61■□□□□ 0.09
UBE2D4-204ENST00000440899 ZNF790Q6PG37 636 aa15.6■□□□□ 0.09
UBE2D4-204ENST00000440899 TEX13AQ9BXU3 409 aaPredicted RBP15.6■□□□□ 0.09
UBE2D4-204ENST00000440899 NUDCQ9Y266 331 aa15.6■□□□□ 0.09
UBE2D4-204ENST00000440899 KIF3CO14782 793 aa15.59■□□□□ 0.09
UBE2D4-204ENST00000440899 CANXP27824 592 aaKnown RBP15.59■□□□□ 0.09
UBE2D4-204ENST00000440899 NFIXQ14938 502 aa15.59■□□□□ 0.09
UBE2D4-204ENST00000440899 ZNF496Q96IT1 587 aaPredicted RBP15.59■□□□□ 0.09
UBE2D4-204ENST00000440899 A0A087WZG4 1122 aa15.58■□□□□ 0.08
UBE2D4-204ENST00000440899 CHRNA5P30532 468 aa15.58■□□□□ 0.08
UBE2D4-204ENST00000440899 PRKAR2BP31323 418 aa15.58■□□□□ 0.08
UBE2D4-204ENST00000440899 EIF5P55010 431 aaKnown RBP15.58■□□□□ 0.08
UBE2D4-204ENST00000440899 PHACTR3Q96KR7 559 aa15.58■□□□□ 0.08
UBE2D4-204ENST00000440899 RSPH6AQ9H0K4 717 aa15.58■□□□□ 0.08
UBE2D4-204ENST00000440899 BCL2L12Q9HB09 334 aa15.58■□□□□ 0.08
UBE2D4-204ENST00000440899 SERPINB2P05120 415 aa15.57■□□□□ 0.08
UBE2D4-204ENST00000440899 HSPA6P17066 643 aa15.57■□□□□ 0.08
UBE2D4-204ENST00000440899 C9orf131Q5VYM1 1079 aa15.57■□□□□ 0.08
UBE2D4-204ENST00000440899 FMNL2Q96PY5 1086 aa15.57■□□□□ 0.08
UBE2D4-204ENST00000440899 CEMIPQ8WUJ3 1361 aa15.57■□□□□ 0.08
UBE2D4-204ENST00000440899 HEG1Q9ULI3 1381 aa15.57■□□□□ 0.08
UBE2D4-204ENST00000440899 VIRMAQ69YN4 1812 aaKnown RBP15.56■□□□□ 0.08
UBE2D4-204ENST00000440899 BRCA1P38398 1863 aaKnown RBP15.55■□□□□ 0.08
UBE2D4-204ENST00000440899 U2AF1L5P0DN76 240 aaPredicted RBP15.55■□□□□ 0.08
UBE2D4-204ENST00000440899 PPP2R1AP30153 589 aa15.55■□□□□ 0.08
UBE2D4-204ENST00000440899 U2AF1Q01081 240 aaKnown RBP eCLIP15.55■□□□□ 0.08
UBE2D4-204ENST00000440899 UBR2Q8IWV8 1755 aa15.54■□□□□ 0.08
UBE2D4-204ENST00000440899 BTBD11A6QL63 1104 aa15.54■□□□□ 0.08
UBE2D4-204ENST00000440899 IL6STP40189 918 aaPredicted RBP15.54■□□□□ 0.08
UBE2D4-204ENST00000440899 NPM2Q86SE8 214 aaKnown RBP15.54■□□□□ 0.08
UBE2D4-204ENST00000440899 ARFGEF1Q9Y6D6 1849 aa15.53■□□□□ 0.08
UBE2D4-204ENST00000440899 TOMM70O94826 608 aa15.53■□□□□ 0.08
UBE2D4-204ENST00000440899 BICDL1Q6ZP65 573 aa15.53■□□□□ 0.08
UBE2D4-204ENST00000440899 RTF1Q92541 710 aaKnown RBP15.53■□□□□ 0.08
UBE2D4-204ENST00000440899 RNF181Q9P0P0 153 aa15.53■□□□□ 0.08
UBE2D4-204ENST00000440899 H0YIN7 160 aa15.52■□□□□ 0.08
UBE2D4-204ENST00000440899 A1BGP04217 495 aa15.52■□□□□ 0.08
UBE2D4-204ENST00000440899 TTLL6Q8N841 843 aa15.52■□□□□ 0.08
UBE2D4-204ENST00000440899 NMRK2Q9NPI5 230 aa15.52■□□□□ 0.08
UBE2D4-204ENST00000440899 TBC1D2BQ9UPU7 963 aa15.52■□□□□ 0.08
UBE2D4-204ENST00000440899 ZNF330Q9Y3S2 320 aaPredicted RBP15.52■□□□□ 0.08
UBE2D4-204ENST00000440899 KCNQ3O43525 872 aa15.51■□□□□ 0.07
UBE2D4-204ENST00000440899 TBC1D9BQ66K14 1250 aa15.51■□□□□ 0.07
UBE2D4-204ENST00000440899 C2CD5Q86YS7 1000 aa15.51■□□□□ 0.07
UBE2D4-204ENST00000440899 PDZRN3Q9UPQ7 1066 aa15.51■□□□□ 0.07
UBE2D4-204ENST00000440899 KDM2BQ8NHM5 1336 aa15.5■□□□□ 0.07
UBE2D4-204ENST00000440899 HTATSF1O43719 755 aaKnown RBP15.5■□□□□ 0.07
UBE2D4-204ENST00000440899 NRXN2Q9P2S2 1712 aa15.5■□□□□ 0.07
UBE2D4-204ENST00000440899 AFDNP55196 1824 aaKnown RBP15.5■□□□□ 0.07
UBE2D4-204ENST00000440899 SIPA1L3O60292 1781 aaPredicted RBP15.49■□□□□ 0.07
UBE2D4-204ENST00000440899 PDE6BP35913 854 aa15.49■□□□□ 0.07
UBE2D4-204ENST00000440899 MCM10Q7L590 875 aa15.49■□□□□ 0.07
UBE2D4-204ENST00000440899 SETDB2Q96T68 719 aa15.49■□□□□ 0.07
UBE2D4-204ENST00000440899 BRIP1Q9BX63 1249 aa15.49■□□□□ 0.07
UBE2D4-204ENST00000440899 USP16Q9Y5T5 823 aa15.49■□□□□ 0.07
UBE2D4-204ENST00000440899 CARMIL3Q8ND23 1372 aa15.49■□□□□ 0.07
UBE2D4-204ENST00000440899 CAMTA2O94983 1202 aa15.48■□□□□ 0.07
UBE2D4-204ENST00000440899 SNRPA1P09661 255 aaKnown RBP15.48■□□□□ 0.07
UBE2D4-204ENST00000440899 LMNB1P20700 586 aa15.48■□□□□ 0.07
UBE2D4-204ENST00000440899 C16orf71Q8IYS4 520 aaPredicted RBP15.48■□□□□ 0.07
UBE2D4-204ENST00000440899 RBM46Q8TBY0 533 aaKnown RBP15.48■□□□□ 0.07
UBE2D4-204ENST00000440899 ZC3H4Q9UPT8 1303 aaKnown RBP15.47■□□□□ 0.07
UBE2D4-204ENST00000440899 APLP1P51693 650 aa15.47■□□□□ 0.07
UBE2D4-204ENST00000440899 RASSF7Q02833 373 aa15.47■□□□□ 0.07
UBE2D4-204ENST00000440899 PRR5LQ6MZQ0 368 aa15.47■□□□□ 0.07
UBE2D4-204ENST00000440899 DZIP3Q86Y13 1208 aaKnown RBP15.47■□□□□ 0.07
UBE2D4-204ENST00000440899 NEFMP07197 916 aa15.46■□□□□ 0.07
UBE2D4-204ENST00000440899 DCTN1Q14203 1278 aa15.46■□□□□ 0.07
UBE2D4-204ENST00000440899 TAF7Q15545 349 aaPredicted RBP15.46■□□□□ 0.07
UBE2D4-204ENST00000440899 CLEC4GQ6UXB4 293 aa15.46■□□□□ 0.07
UBE2D4-204ENST00000440899 ZNF622Q969S3 477 aaKnown RBP eCLIP15.46■□□□□ 0.07
UBE2D4-204ENST00000440899 NPHP1O15259 732 aa15.45■□□□□ 0.06
UBE2D4-204ENST00000440899 CNBD1Q8NA66 436 aa15.45■□□□□ 0.06
UBE2D4-204ENST00000440899 RRAGCQ9HB90 399 aa15.45■□□□□ 0.06
UBE2D4-204ENST00000440899 PRAMEF22A3QJZ6 481 aa15.44■□□□□ 0.06
UBE2D4-204ENST00000440899 PIP4K2AP48426 406 aaPredicted RBP15.44■□□□□ 0.06
UBE2D4-204ENST00000440899 ST5P78524 1137 aa15.44■□□□□ 0.06
UBE2D4-204ENST00000440899 FSTL1Q12841 308 aa15.44■□□□□ 0.06
UBE2D4-204ENST00000440899 CCDC24Q8N4L8 307 aa15.44■□□□□ 0.06
UBE2D4-204ENST00000440899 ZNF652Q9Y2D9 606 aa15.44■□□□□ 0.06
UBE2D4-204ENST00000440899 SCN7AQ01118 1682 aa15.44■□□□□ 0.06
UBE2D4-204ENST00000440899 NFKBIEO00221 500 aa15.43■□□□□ 0.06
UBE2D4-204ENST00000440899 PRELPP51888 382 aa15.43■□□□□ 0.06
UBE2D4-204ENST00000440899 SBF1O95248 1867 aa15.43■□□□□ 0.06
UBE2D4-204ENST00000440899 DLEC1Q9Y238 1755 aa15.42■□□□□ 0.06
UBE2D4-204ENST00000440899 GLTPD2A6NH11 291 aa15.42■□□□□ 0.06
UBE2D4-204ENST00000440899 RGL2O15211 777 aa15.42■□□□□ 0.06
UBE2D4-204ENST00000440899 C21orf2O43822 256 aa15.42■□□□□ 0.06
UBE2D4-204ENST00000440899 CNKSR1Q969H4 720 aa15.42■□□□□ 0.06
UBE2D4-204ENST00000440899 NBPF26B4DH59 902 aa15.41■□□□□ 0.06
UBE2D4-204ENST00000440899 SRGNP10124 158 aa15.41■□□□□ 0.06
UBE2D4-204ENST00000440899 VEGFAP15692 232 aaPredicted RBP15.41■□□□□ 0.06
UBE2D4-204ENST00000440899 STYK1Q6J9G0 422 aa15.41■□□□□ 0.06
UBE2D4-204ENST00000440899 NBPF10Q6P3W6 841 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms