RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 SAMD9LQ8IVG5 1584 aa9.44□□□□□ -0.9
CHD6-204ENST00000440647 ERBB4Q15303 1308 aa9.43□□□□□ -0.9
CHD6-204ENST00000440647 SOBPA7XYQ1 873 aa9.43□□□□□ -0.9
CHD6-204ENST00000440647 LILRA1O75019 489 aa9.43□□□□□ -0.9
CHD6-204ENST00000440647 ADD1P35611 737 aaKnown RBP9.43□□□□□ -0.9
CHD6-204ENST00000440647 VAC14Q08AM6 782 aa9.43□□□□□ -0.9
CHD6-204ENST00000440647 SUPT6HQ7KZ85 1726 aaKnown RBP9.42□□□□□ -0.9
CHD6-204ENST00000440647 MTUS2Q5JR59 1369 aa9.42□□□□□ -0.9
CHD6-204ENST00000440647 SOS2Q07890 1332 aaPredicted RBP9.42□□□□□ -0.9
CHD6-204ENST00000440647 VSIG8P0DPA2 414 aa9.42□□□□□ -0.9
CHD6-204ENST00000440647 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.42□□□□□ -0.98e-8■■■■■ 36.6
CHD6-204ENST00000440647 HOMEZQ8IX15 550 aa9.42□□□□□ -0.9
CHD6-204ENST00000440647 SETD1BQ9UPS6 1966 aaKnown RBP9.42□□□□□ -0.9
CHD6-204ENST00000440647 PLEKHH2Q8IVE3 1493 aa9.41□□□□□ -0.9
CHD6-204ENST00000440647 CNTLNQ9NXG0 1405 aa9.41□□□□□ -0.9
CHD6-204ENST00000440647 CCNB3Q8WWL7 1395 aa9.41□□□□□ -0.9
CHD6-204ENST00000440647 ERICH6Q7L0X2 663 aa9.41□□□□□ -0.9
CHD6-204ENST00000440647 STRCQ7RTU9 1775 aa9.41□□□□□ -0.9
CHD6-204ENST00000440647 MROH2AA6NES4 1674 aa9.41□□□□□ -0.9
CHD6-204ENST00000440647 ATP7AQ04656 1500 aa9.41□□□□□ -0.9
CHD6-204ENST00000440647 GPATCH8Q9UKJ3 1502 aaKnown RBP9.41□□□□□ -0.9
CHD6-204ENST00000440647 SPAG9O60271 1321 aaKnown RBP9.4□□□□□ -0.9
CHD6-204ENST00000440647 TTLL8A6PVC2 850 aa9.4□□□□□ -0.9
CHD6-204ENST00000440647 RAD21O60216 631 aa9.4□□□□□ -0.9
CHD6-204ENST00000440647 AGBL1Q96MI9 1066 aa9.4□□□□□ -0.9
CHD6-204ENST00000440647 EHBP1L1Q8N3D4 1523 aa9.4□□□□□ -0.91
CHD6-204ENST00000440647 INO80Q9ULG1 1556 aaPredicted RBP9.39□□□□□ -0.91
CHD6-204ENST00000440647 SPINT1O43278 529 aa9.39□□□□□ -0.91
CHD6-204ENST00000440647 PPFIA3O75145 1194 aa9.39□□□□□ -0.91
CHD6-204ENST00000440647 ADH1AP07327 375 aa9.39□□□□□ -0.91
CHD6-204ENST00000440647 POM121Q96HA1 1249 aa9.39□□□□□ -0.91
CHD6-204ENST00000440647 CYLDQ9NQC7 956 aa9.39□□□□□ -0.91
CHD6-204ENST00000440647 CFDP1Q9UEE9 299 aaPredicted RBP9.39□□□□□ -0.91
CHD6-204ENST00000440647 CLTCQ00610 1675 aaKnown RBP9.39□□□□□ -0.91
CHD6-204ENST00000440647 ADGBQ8N7X0 1667 aa9.39□□□□□ -0.91
CHD6-204ENST00000440647 HNRNPMP52272 730 aaKnown RBP eCLIP9.38□□□□□ -0.916e-8■■■■■ 31.3
CHD6-204ENST00000440647 RELBQ01201 579 aa9.38□□□□□ -0.91
CHD6-204ENST00000440647 WWC1Q8IX03 1113 aa9.38□□□□□ -0.91
CHD6-204ENST00000440647 PCDHB11Q9Y5F2 797 aa9.38□□□□□ -0.91
CHD6-204ENST00000440647 TIAM1Q13009 1591 aa9.37□□□□□ -0.91
CHD6-204ENST00000440647 SOX11P35716 441 aa9.37□□□□□ -0.91
CHD6-204ENST00000440647 PTGIRP43119 386 aa9.37□□□□□ -0.91
CHD6-204ENST00000440647 ERVK-9P63128 1117 aa9.37□□□□□ -0.91
CHD6-204ENST00000440647 CC2D2BQ6DHV5 1058 aa9.37□□□□□ -0.91
CHD6-204ENST00000440647 PHTF2Q8N3S3 785 aa9.37□□□□□ -0.91
CHD6-204ENST00000440647 KIAA1107Q9UPP5 1409 aa9.37□□□□□ -0.91
CHD6-204ENST00000440647 PLXNC1O60486 1568 aa9.37□□□□□ -0.91
CHD6-204ENST00000440647 A2MP01023 1474 aa9.36□□□□□ -0.91
CHD6-204ENST00000440647 SEMA3FQ13275 785 aa9.36□□□□□ -0.91
CHD6-204ENST00000440647 KDF1Q8NAX2 398 aaPredicted RBP9.36□□□□□ -0.91
CHD6-204ENST00000440647 DNMT3LQ9UJW3 386 aa9.36□□□□□ -0.91
CHD6-204ENST00000440647 MYO3AQ8NEV4 1616 aa9.35□□□□□ -0.91
CHD6-204ENST00000440647 NPATQ14207 1427 aa9.35□□□□□ -0.91
CHD6-204ENST00000440647 SLFNL1Q499Z3 407 aa9.35□□□□□ -0.91
CHD6-204ENST00000440647 CEP162Q5TB80 1403 aa9.35□□□□□ -0.91
CHD6-204ENST00000440647 CCDC85AQ96PX6 553 aaPredicted RBP9.35□□□□□ -0.91
CHD6-204ENST00000440647 ZNF395Q9H8N7 513 aaPredicted RBP9.35□□□□□ -0.91
CHD6-204ENST00000440647 PTPRTO14522 1441 aa9.34□□□□□ -0.91
CHD6-204ENST00000440647 LORP23490 312 aaPredicted RBP9.34□□□□□ -0.91
CHD6-204ENST00000440647 INSM2Q96T92 566 aaPredicted RBP9.34□□□□□ -0.91
CHD6-204ENST00000440647 ZNF142P52746 1687 aaPredicted RBP9.34□□□□□ -0.91
CHD6-204ENST00000440647 ZMYM3Q14202 1370 aa9.34□□□□□ -0.91
CHD6-204ENST00000440647 CAMSAP1Q5T5Y3 1602 aa9.34□□□□□ -0.91
CHD6-204ENST00000440647 ATP5J2-PTCD1G3V325 749 aa9.33□□□□□ -0.92
CHD6-204ENST00000440647 SCTRP47872 440 aa9.33□□□□□ -0.92
CHD6-204ENST00000440647 GGT6Q6P531 493 aa9.33□□□□□ -0.92
CHD6-204ENST00000440647 RNF135Q8IUD6 432 aa9.33□□□□□ -0.92
CHD6-204ENST00000440647 NCOA1Q15788 1441 aa9.32□□□□□ -0.92
CHD6-204ENST00000440647 FIGNL2A6NMB9 653 aa9.32□□□□□ -0.92
CHD6-204ENST00000440647 CTSOP43234 321 aaPredicted RBP9.32□□□□□ -0.92
CHD6-204ENST00000440647 PTSQ03393 145 aa9.32□□□□□ -0.92
CHD6-204ENST00000440647 TSGA10IPQ3SY00 556 aa9.32□□□□□ -0.92
CHD6-204ENST00000440647 CDCA7Q9BWT1 371 aaPredicted RBP9.32□□□□□ -0.92
CHD6-204ENST00000440647 CHIC2Q9UKJ5 165 aa9.32□□□□□ -0.92
CHD6-204ENST00000440647 CEP170BQ9Y4F5 1589 aaPredicted RBP9.32□□□□□ -0.92
CHD6-204ENST00000440647 TRAK2O60296 914 aa9.31□□□□□ -0.92
CHD6-204ENST00000440647 CYP2U1Q7Z449 544 aa9.31□□□□□ -0.92
CHD6-204ENST00000440647 OSBPL3Q9H4L5 887 aa9.31□□□□□ -0.92
CHD6-204ENST00000440647 ALG2Q9H553 416 aa9.31□□□□□ -0.92
CHD6-204ENST00000440647 POLMQ9NP87 494 aaPredicted RBP9.31□□□□□ -0.92
CHD6-204ENST00000440647 RTEL1-TNFRSF6BF6WH68 1400 aa9.31□□□□□ -0.92
CHD6-204ENST00000440647 CAMSAP2Q08AD1 1489 aa9.3□□□□□ -0.92
CHD6-204ENST00000440647 NCOA2Q15596 1464 aa9.3□□□□□ -0.92
CHD6-204ENST00000440647 CCDC141Q6ZP82 1450 aa9.3□□□□□ -0.92
CHD6-204ENST00000440647 MYCP01106 439 aaPredicted RBP9.3□□□□□ -0.92
CHD6-204ENST00000440647 DOLKQ9UPQ8 538 aa9.3□□□□□ -0.92
CHD6-204ENST00000440647 ZNF644Q9H582 1327 aaPredicted RBP9.3□□□□□ -0.92
CHD6-204ENST00000440647 MBD5Q9P267 1494 aa9.29□□□□□ -0.92
CHD6-204ENST00000440647 USP4Q13107 963 aa9.29□□□□□ -0.92
CHD6-204ENST00000440647 NANOS1Q8WY41 292 aaKnown RBP9.29□□□□□ -0.92
CHD6-204ENST00000440647 CLUAP1Q96AJ1 413 aa9.29□□□□□ -0.92
CHD6-204ENST00000440647 PTPRKQ15262 1439 aa9.29□□□□□ -0.92
CHD6-204ENST00000440647 PLA2R1Q13018 1463 aa9.28□□□□□ -0.92
CHD6-204ENST00000440647 IQSEC2Q5JU85 1478 aa9.28□□□□□ -0.92
CHD6-204ENST00000440647 LTBP4Q8N2S1 1624 aa9.28□□□□□ -0.92
CHD6-204ENST00000440647 KDM5DQ9BY66 1539 aa9.28□□□□□ -0.92
CHD6-204ENST00000440647 A0A1W2PRU2 124 aa9.28□□□□□ -0.92
CHD6-204ENST00000440647 MAP7D1Q3KQU3 841 aa9.28□□□□□ -0.92
CHD6-204ENST00000440647 CCDC155Q8N6L0 562 aa9.28□□□□□ -0.92
CHD6-204ENST00000440647 RNF217Q8TC41 542 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms