RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 IL17REQ8NFR9 667 aa27.86■■■□□ 2.05
CPNE1-219ENST00000440240 ZBTB1Q9Y2K1 713 aa27.86■■■□□ 2.05
CPNE1-219ENST00000440240 ADAMTS7Q9UKP4 1686 aa27.85■■■□□ 2.05
CPNE1-219ENST00000440240 DALRD3Q5D0E6 543 aaKnown RBP27.85■■■□□ 2.05
CPNE1-219ENST00000440240 KCPQ6ZWJ8 1503 aa27.85■■■□□ 2.05
CPNE1-219ENST00000440240 TEX13AQ9BXU3 409 aaPredicted RBP27.84■■■□□ 2.05
CPNE1-219ENST00000440240 COL15A1P39059 1388 aa27.84■■■□□ 2.05
CPNE1-219ENST00000440240 ZNF790Q6PG37 636 aa27.83■■■□□ 2.05
CPNE1-219ENST00000440240 NUDCQ9Y266 331 aa27.83■■■□□ 2.05
CPNE1-219ENST00000440240 CANXP27824 592 aaKnown RBP27.82■■■□□ 2.04
CPNE1-219ENST00000440240 NFIXQ14938 502 aa27.81■■■□□ 2.04
CPNE1-219ENST00000440240 CEP350Q5VT06 3117 aa27.81■■■□□ 2.04
CPNE1-219ENST00000440240 ZNF496Q96IT1 587 aaPredicted RBP27.8■■■□□ 2.04
CPNE1-219ENST00000440240 VIRMAQ69YN4 1812 aaKnown RBP27.79■■■□□ 2.04
CPNE1-219ENST00000440240 A0A087WZG4 1122 aa27.79■■■□□ 2.04
CPNE1-219ENST00000440240 KIF3CO14782 793 aa27.79■■■□□ 2.04
CPNE1-219ENST00000440240 CHRNA5P30532 468 aa27.79■■■□□ 2.04
CPNE1-219ENST00000440240 EIF5P55010 431 aaKnown RBP27.79■■■□□ 2.04
CPNE1-219ENST00000440240 PRKAR2BP31323 418 aa27.78■■■□□ 2.04
CPNE1-219ENST00000440240 PHACTR3Q96KR7 559 aa27.78■■■□□ 2.04
CPNE1-219ENST00000440240 BCL2L12Q9HB09 334 aa27.78■■■□□ 2.04
CPNE1-219ENST00000440240 HEG1Q9ULI3 1381 aa27.77■■■□□ 2.04
CPNE1-219ENST00000440240 SERPINB2P05120 415 aa27.77■■■□□ 2.04
CPNE1-219ENST00000440240 FMNL2Q96PY5 1086 aa27.77■■■□□ 2.04
CPNE1-219ENST00000440240 RSPH6AQ9H0K4 717 aa27.77■■■□□ 2.04
CPNE1-219ENST00000440240 HSPA6P17066 643 aa27.76■■■□□ 2.03
CPNE1-219ENST00000440240 C9orf131Q5VYM1 1079 aa27.76■■■□□ 2.03
CPNE1-219ENST00000440240 BRCA1P38398 1863 aaKnown RBP27.76■■■□□ 2.03
CPNE1-219ENST00000440240 CEMIPQ8WUJ3 1361 aa27.75■■■□□ 2.03
CPNE1-219ENST00000440240 UBR2Q8IWV8 1755 aa27.74■■■□□ 2.03
CPNE1-219ENST00000440240 BTBD11A6QL63 1104 aa27.74■■■□□ 2.03
CPNE1-219ENST00000440240 U2AF1L5P0DN76 240 aaPredicted RBP27.74■■■□□ 2.03
CPNE1-219ENST00000440240 PPP2R1AP30153 589 aa27.74■■■□□ 2.03
CPNE1-219ENST00000440240 U2AF1Q01081 240 aaKnown RBP eCLIP27.74■■■□□ 2.032e-6■□□□□ 8.5
CPNE1-219ENST00000440240 NPM2Q86SE8 214 aaKnown RBP27.73■■■□□ 2.03
CPNE1-219ENST00000440240 IL6STP40189 918 aaPredicted RBP27.72■■■□□ 2.03
CPNE1-219ENST00000440240 RTF1Q92541 710 aaKnown RBP27.72■■■□□ 2.03
CPNE1-219ENST00000440240 ARFGEF1Q9Y6D6 1849 aa27.71■■■□□ 2.03
CPNE1-219ENST00000440240 TOMM70O94826 608 aa27.71■■■□□ 2.03
CPNE1-219ENST00000440240 BICDL1Q6ZP65 573 aa27.7■■■□□ 2.02
CPNE1-219ENST00000440240 RNF181Q9P0P0 153 aa27.69■■■□□ 2.02
CPNE1-219ENST00000440240 ZNF330Q9Y3S2 320 aaPredicted RBP27.69■■■□□ 2.02
CPNE1-219ENST00000440240 H0YIN7 160 aa27.68■■■□□ 2.02
CPNE1-219ENST00000440240 A1BGP04217 495 aa27.68■■■□□ 2.02
CPNE1-219ENST00000440240 TTLL6Q8N841 843 aa27.68■■■□□ 2.02
CPNE1-219ENST00000440240 TBC1D2BQ9UPU7 963 aa27.68■■■□□ 2.02
CPNE1-219ENST00000440240 NMRK2Q9NPI5 230 aa27.67■■■□□ 2.02
CPNE1-219ENST00000440240 KCNQ3O43525 872 aa27.66■■■□□ 2.02
CPNE1-219ENST00000440240 HTATSF1O43719 755 aaKnown RBP27.66■■■□□ 2.02
CPNE1-219ENST00000440240 TBC1D9BQ66K14 1250 aa27.66■■■□□ 2.02
CPNE1-219ENST00000440240 C2CD5Q86YS7 1000 aa27.66■■■□□ 2.02
CPNE1-219ENST00000440240 PDZRN3Q9UPQ7 1066 aa27.66■■■□□ 2.02
CPNE1-219ENST00000440240 KDM2BQ8NHM5 1336 aa27.66■■■□□ 2.02
CPNE1-219ENST00000440240 NRXN2Q9P2S2 1712 aa27.65■■■□□ 2.02
CPNE1-219ENST00000440240 AFDNP55196 1824 aaKnown RBP27.64■■■□□ 2.02
CPNE1-219ENST00000440240 SIPA1L3O60292 1781 aaPredicted RBP27.64■■■□□ 2.02
CPNE1-219ENST00000440240 MCM10Q7L590 875 aa27.63■■■□□ 2.01
CPNE1-219ENST00000440240 BRIP1Q9BX63 1249 aa27.63■■■□□ 2.01
CPNE1-219ENST00000440240 USP16Q9Y5T5 823 aa27.63■■■□□ 2.01
CPNE1-219ENST00000440240 SNRPA1P09661 255 aaKnown RBP27.62■■■□□ 2.01
CPNE1-219ENST00000440240 PDE6BP35913 854 aa27.62■■■□□ 2.01
CPNE1-219ENST00000440240 C16orf71Q8IYS4 520 aaPredicted RBP27.62■■■□□ 2.01
CPNE1-219ENST00000440240 SETDB2Q96T68 719 aa27.62■■■□□ 2.01
CPNE1-219ENST00000440240 CARMIL3Q8ND23 1372 aa27.6■■■□□ 2.01
CPNE1-219ENST00000440240 CAMTA2O94983 1202 aa27.6■■■□□ 2.01
CPNE1-219ENST00000440240 NEFMP07197 916 aa27.6■■■□□ 2.01
CPNE1-219ENST00000440240 LMNB1P20700 586 aa27.6■■■□□ 2.01
CPNE1-219ENST00000440240 APLP1P51693 650 aa27.6■■■□□ 2.01
CPNE1-219ENST00000440240 DZIP3Q86Y13 1208 aaKnown RBP27.6■■■□□ 2.01
CPNE1-219ENST00000440240 ZC3H4Q9UPT8 1303 aaKnown RBP27.6■■■□□ 2.01
CPNE1-219ENST00000440240 PRR5LQ6MZQ0 368 aa27.59■■■□□ 2.01
CPNE1-219ENST00000440240 RBM46Q8TBY0 533 aaKnown RBP27.59■■■□□ 2.01
CPNE1-219ENST00000440240 NPHP1O15259 732 aa27.58■■■□□ 2.01
CPNE1-219ENST00000440240 TAF7Q15545 349 aaPredicted RBP27.58■■■□□ 2.01
CPNE1-219ENST00000440240 RASSF7Q02833 373 aa27.57■■■□□ 2
CPNE1-219ENST00000440240 DCTN1Q14203 1278 aa27.57■■■□□ 2
CPNE1-219ENST00000440240 CLEC4GQ6UXB4 293 aa27.57■■■□□ 2
CPNE1-219ENST00000440240 ZNF622Q969S3 477 aaKnown RBP eCLIP27.57■■■□□ 22e-6■■■□□ 15.2
CPNE1-219ENST00000440240 CNBD1Q8NA66 436 aa27.56■■■□□ 2
CPNE1-219ENST00000440240 RRAGCQ9HB90 399 aa27.56■■■□□ 2
CPNE1-219ENST00000440240 PRAMEF22A3QJZ6 481 aa27.55■■■□□ 2
CPNE1-219ENST00000440240 SBF1O95248 1867 aa27.54■■■□□ 2
CPNE1-219ENST00000440240 ST5P78524 1137 aa27.54■■■□□ 2
CPNE1-219ENST00000440240 CCDC24Q8N4L8 307 aa27.54■■■□□ 2
CPNE1-219ENST00000440240 ZNF652Q9Y2D9 606 aa27.54■■■□□ 2
CPNE1-219ENST00000440240 PIP4K2AP48426 406 aaPredicted RBP27.53■■■□□ 2
CPNE1-219ENST00000440240 FSTL1Q12841 308 aa27.53■■■□□ 2
CPNE1-219ENST00000440240 DLEC1Q9Y238 1755 aa27.52■■■□□ 2
CPNE1-219ENST00000440240 SCN7AQ01118 1682 aa27.52■■■□□ 2
CPNE1-219ENST00000440240 NFKBIEO00221 500 aa27.51■■□□□ 1.99
CPNE1-219ENST00000440240 RGL2O15211 777 aa27.51■■□□□ 1.99
CPNE1-219ENST00000440240 PNISRQ8TF01 805 aaKnown RBP27.51■■□□□ 1.99
CPNE1-219ENST00000440240 PNNQ9H307 717 aaKnown RBP27.51■■□□□ 1.99
CPNE1-219ENST00000440240 GLTPD2A6NH11 291 aa27.5■■□□□ 1.99
CPNE1-219ENST00000440240 C21orf2O43822 256 aa27.5■■□□□ 1.99
CPNE1-219ENST00000440240 PRELPP51888 382 aa27.5■■□□□ 1.99
CPNE1-219ENST00000440240 CNKSR1Q969H4 720 aa27.5■■□□□ 1.99
CPNE1-219ENST00000440240 STYK1Q6J9G0 422 aa27.49■■□□□ 1.99
CPNE1-219ENST00000440240 NBPF5PQ86XG9 351 aaPredicted RBP27.49■■□□□ 1.99
CPNE1-219ENST00000440240 NBPF26B4DH59 902 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms