RNA–Protein interactions for RNA: ENST00000439987.6

IFT140-204, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 2,580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-204ENST00000439987 ANKRD45Q5TZF3 282 aa18.66■□□□□ 0.58
IFT140-204ENST00000439987 FMNL2Q96PY5 1086 aa18.66■□□□□ 0.58
IFT140-204ENST00000439987 DDX21Q9NR30 783 aaKnown RBP eCLIP18.66■□□□□ 0.58
IFT140-204ENST00000439987 ADCY9O60503 1353 aa18.65■□□□□ 0.58
IFT140-204ENST00000439987 SNRPA1P09661 255 aaKnown RBP18.65■□□□□ 0.58
IFT140-204ENST00000439987 SRCIN1Q9C0H9 1055 aa18.65■□□□□ 0.58
IFT140-204ENST00000439987 PDIA6Q15084 440 aa18.65■□□□□ 0.58
IFT140-204ENST00000439987 USP44Q9H0E7 712 aa18.65■□□□□ 0.58
IFT140-204ENST00000439987 DISP2A7MBM2 1401 aa18.64■□□□□ 0.57
IFT140-204ENST00000439987 BEND3Q5T5X7 828 aa18.64■□□□□ 0.57
IFT140-204ENST00000439987 HMMRO75330 724 aa18.63■□□□□ 0.57
IFT140-204ENST00000439987 ADAMTS2O95450 1211 aa18.63■□□□□ 0.57
IFT140-204ENST00000439987 ZBTB47Q9UFB7 747 aaPredicted RBP18.63■□□□□ 0.57
IFT140-204ENST00000439987 PLCH1Q4KWH8 1693 aa18.63■□□□□ 0.57
IFT140-204ENST00000439987 KSR2Q6VAB6 950 aa18.62■□□□□ 0.57
IFT140-204ENST00000439987 NPM2Q86SE8 214 aaKnown RBP18.62■□□□□ 0.57
IFT140-204ENST00000439987 GLI3P10071 1580 aa18.62■□□□□ 0.57
IFT140-204ENST00000439987 USP16Q9Y5T5 823 aa18.62■□□□□ 0.57
IFT140-204ENST00000439987 UBAP1LF5GYI3 381 aa18.61■□□□□ 0.57
IFT140-204ENST00000439987 UBTFL1P0CB47 393 aaPredicted RBP18.61■□□□□ 0.57
IFT140-204ENST00000439987 MAP3K2Q9Y2U5 619 aa18.61■□□□□ 0.57
IFT140-204ENST00000439987 DDX58O95786 925 aaKnown RBP18.6■□□□□ 0.57
IFT140-204ENST00000439987 LRRFIP2Q9Y608 721 aaKnown RBP18.6■□□□□ 0.57
IFT140-204ENST00000439987 UBR2Q8IWV8 1755 aa18.6■□□□□ 0.57
IFT140-204ENST00000439987 PAPPAQ13219 1627 aa18.6■□□□□ 0.57
IFT140-204ENST00000439987 TOGARAM1Q9Y4F4 1720 aa18.6■□□□□ 0.57
IFT140-204ENST00000439987 MYL6BP14649 208 aa18.59■□□□□ 0.57
IFT140-204ENST00000439987 LAMB4A4D0S4 1761 aa18.59■□□□□ 0.57
IFT140-204ENST00000439987 NRAPQ86VF7 1730 aa18.58■□□□□ 0.57
IFT140-204ENST00000439987 NUTM2BA6NNL0 878 aaPredicted RBP18.58■□□□□ 0.57
IFT140-204ENST00000439987 NUTM2EB1AL46 878 aaPredicted RBP18.58■□□□□ 0.57
IFT140-204ENST00000439987 ATP8B2P98198 1209 aa18.58■□□□□ 0.57
IFT140-204ENST00000439987 AIMP1Q12904 312 aaKnown RBP18.58■□□□□ 0.57
IFT140-204ENST00000439987 NUTM2AQ8IVF1 878 aaPredicted RBP18.58■□□□□ 0.57
IFT140-204ENST00000439987 KCPQ6ZWJ8 1503 aa18.58■□□□□ 0.56
IFT140-204ENST00000439987 ALDH1L1O75891 902 aa18.57■□□□□ 0.56
IFT140-204ENST00000439987 LRP10Q7Z4F1 713 aa18.57■□□□□ 0.56
IFT140-204ENST00000439987 TMOD3Q9NYL9 352 aa18.57■□□□□ 0.56
IFT140-204ENST00000439987 TNS2Q63HR2 1409 aa18.57■□□□□ 0.56
IFT140-204ENST00000439987 WNK3Q9BYP7 1800 aa18.57■□□□□ 0.56
IFT140-204ENST00000439987 NBPF7P0C2Y1 421 aaPredicted RBP18.57■□□□□ 0.56
IFT140-204ENST00000439987 XAGE3Q8WTP9 111 aa18.56■□□□□ 0.56
IFT140-204ENST00000439987 PNMA6EA0A0J9YXQ4 647 aa18.56■□□□□ 0.56
IFT140-204ENST00000439987 EXOC5O00471 708 aa18.56■□□□□ 0.56
IFT140-204ENST00000439987 COPS6Q7L5N1 327 aa18.56■□□□□ 0.56
IFT140-204ENST00000439987 SPATA31A1Q5TZJ5 1347 aa18.55■□□□□ 0.56
IFT140-204ENST00000439987 LINS1Q8NG48 757 aa18.55■□□□□ 0.56
IFT140-204ENST00000439987 ERBB4Q15303 1308 aa18.55■□□□□ 0.56
IFT140-204ENST00000439987 SEC24BO95487 1268 aa18.55■□□□□ 0.56
IFT140-204ENST00000439987 RIC3Q7Z5B4 369 aa18.55■□□□□ 0.56
IFT140-204ENST00000439987 CDCA7Q9BWT1 371 aaPredicted RBP18.55■□□□□ 0.56
IFT140-204ENST00000439987 THRAP3Q9Y2W1 955 aaKnown RBP18.55■□□□□ 0.56
IFT140-204ENST00000439987 BMP2KLQ5H9B9 411 aa18.54■□□□□ 0.56
IFT140-204ENST00000439987 PTCD1O75127 700 aaKnown RBP18.54■□□□□ 0.56
IFT140-204ENST00000439987 NWD2Q9ULI1 1742 aa18.54■□□□□ 0.56
IFT140-204ENST00000439987 SLIT2O94813 1529 aa18.53■□□□□ 0.56
IFT140-204ENST00000439987 PIP4K2AP48426 406 aaPredicted RBP18.53■□□□□ 0.56
IFT140-204ENST00000439987 CWF19L2Q2TBE0 894 aaKnown RBP18.53■□□□□ 0.56
IFT140-204ENST00000439987 APBB1O00213 710 aa18.53■□□□□ 0.56
IFT140-204ENST00000439987 PIGBQ92521 554 aa18.53■□□□□ 0.56
IFT140-204ENST00000439987 LRP6O75581 1613 aa18.52■□□□□ 0.56
IFT140-204ENST00000439987 ANKRD13DQ6ZTN6 518 aa18.52■□□□□ 0.56
IFT140-204ENST00000439987 PLEKHM2Q8IWE5 1019 aa18.52■□□□□ 0.56
IFT140-204ENST00000439987 SSH3Q8TE77 659 aa18.52■□□□□ 0.56
IFT140-204ENST00000439987 C9orf78Q9NZ63 289 aaPredicted RBP18.52■□□□□ 0.56
IFT140-204ENST00000439987 EXOC6BQ9Y2D4 811 aa18.52■□□□□ 0.56
IFT140-204ENST00000439987 ITGB4P16144 1822 aa18.52■□□□□ 0.55
IFT140-204ENST00000439987 SMARCA5O60264 1052 aaPredicted RBP18.51■□□□□ 0.55
IFT140-204ENST00000439987 NEXNQ0ZGT2 675 aa18.51■□□□□ 0.55
IFT140-204ENST00000439987 PPP1R42Q7Z4L9 355 aa18.51■□□□□ 0.55
IFT140-204ENST00000439987 SPATA31A5Q5VU36 1347 aa18.51■□□□□ 0.55
IFT140-204ENST00000439987 SPATA31A7Q8IWB4 1347 aa18.51■□□□□ 0.55
IFT140-204ENST00000439987 C16orf71Q8IYS4 520 aaPredicted RBP18.51■□□□□ 0.55
IFT140-204ENST00000439987 METTL22Q9BUU2 404 aaPredicted RBP18.51■□□□□ 0.55
IFT140-204ENST00000439987 IBTKQ9P2D0 1353 aaPredicted RBP18.51■□□□□ 0.55
IFT140-204ENST00000439987 NBPF26B4DH59 902 aa18.5■□□□□ 0.55
IFT140-204ENST00000439987 IGKV5-2P06315 115 aa18.5■□□□□ 0.55
IFT140-204ENST00000439987 POLA2Q14181 598 aa18.5■□□□□ 0.55
IFT140-204ENST00000439987 NBPF14Q5TI25 921 aa18.5■□□□□ 0.55
IFT140-204ENST00000439987 NBPF10Q6P3W6 841 aaKnown RBP18.5■□□□□ 0.55
IFT140-204ENST00000439987 NBPF15Q8N660 670 aa18.5■□□□□ 0.55
IFT140-204ENST00000439987 HDAC5Q9UQL6 1122 aa18.5■□□□□ 0.55
IFT140-204ENST00000439987 JCADQ9P266 1359 aa18.5■□□□□ 0.55
IFT140-204ENST00000439987 ASAP1Q9ULH1 1129 aa18.5■□□□□ 0.55
IFT140-204ENST00000439987 UTYO14607 1347 aa18.5■□□□□ 0.55
IFT140-204ENST00000439987 GRM8O00222 908 aa18.49■□□□□ 0.55
IFT140-204ENST00000439987 BCL9O00512 1426 aa18.49■□□□□ 0.55
IFT140-204ENST00000439987 ATG3Q9NT62 314 aa18.49■□□□□ 0.55
IFT140-204ENST00000439987 NEURL1BA8MQ27 555 aa18.48■□□□□ 0.55
IFT140-204ENST00000439987 SRGAP3O43295 1099 aa18.48■□□□□ 0.55
IFT140-204ENST00000439987 DDB1Q16531 1140 aa18.48■□□□□ 0.55
IFT140-204ENST00000439987 OTUD7AQ8TE49 926 aaPredicted RBP18.48■□□□□ 0.55
IFT140-204ENST00000439987 LRRCC1Q9C099 1032 aa18.48■□□□□ 0.55
IFT140-204ENST00000439987 MTX1Q13505 466 aa18.48■□□□□ 0.55
IFT140-204ENST00000439987 VSIG10Q8N0Z9 540 aa18.48■□□□□ 0.55
IFT140-204ENST00000439987 MYD88Q99836 296 aa18.48■□□□□ 0.55
IFT140-204ENST00000439987 UPF2Q9HAU5 1272 aaKnown RBP18.48■□□□□ 0.55
IFT140-204ENST00000439987 A1BGP04217 495 aa18.47■□□□□ 0.55
IFT140-204ENST00000439987 PLBD2Q8NHP8 589 aa18.47■□□□□ 0.55
IFT140-204ENST00000439987 ARFGEF2Q9Y6D5 1785 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms