RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 CHMP4AQ9BY43 222 aa9.6□□□□□ -0.87
UBR3-205ENST00000439681 LRRC4BQ9NT99 713 aa9.6□□□□□ -0.87
UBR3-205ENST00000439681 VIRMAQ69YN4 1812 aaKnown RBP9.6□□□□□ -0.87
UBR3-205ENST00000439681 STARD3NLO95772 234 aa9.6□□□□□ -0.87
UBR3-205ENST00000439681 ANXA1P04083 346 aa9.6□□□□□ -0.87
UBR3-205ENST00000439681 INTS5Q6P9B9 1019 aaKnown RBP9.6□□□□□ -0.87
UBR3-205ENST00000439681 LINC00116Q8NCU8 138 aa9.6□□□□□ -0.87
UBR3-205ENST00000439681 DDX21Q9NR30 783 aaKnown RBP eCLIP9.6□□□□□ -0.87
UBR3-205ENST00000439681 DBF4Q9UBU7 674 aaPredicted RBP9.6□□□□□ -0.87
UBR3-205ENST00000439681 CCNL1Q9UK58 526 aaPredicted RBP9.6□□□□□ -0.87
UBR3-205ENST00000439681 NOB1Q9ULX3 412 aaKnown RBP9.6□□□□□ -0.87
UBR3-205ENST00000439681 EP400Q96L91 3159 aa9.6□□□□□ -0.87
UBR3-205ENST00000439681 UBR2Q8IWV8 1755 aa9.59□□□□□ -0.87
UBR3-205ENST00000439681 PLIN1O60240 522 aa9.59□□□□□ -0.87
UBR3-205ENST00000439681 PIP4K2AP48426 406 aaPredicted RBP9.59□□□□□ -0.87
UBR3-205ENST00000439681 STK31Q9BXU1 1019 aa9.59□□□□□ -0.87
UBR3-205ENST00000439681 KCNA4P22459 653 aa9.58□□□□□ -0.88
UBR3-205ENST00000439681 RRP1P56182 461 aaKnown RBP9.58□□□□□ -0.88
UBR3-205ENST00000439681 TXNRD1Q16881 649 aa9.58□□□□□ -0.88
UBR3-205ENST00000439681 SLC27A3Q5K4L6 730 aa9.58□□□□□ -0.88
UBR3-205ENST00000439681 PHAXQ9H814 394 aaKnown RBP9.58□□□□□ -0.88
UBR3-205ENST00000439681 ERBB4Q15303 1308 aa9.58□□□□□ -0.88
UBR3-205ENST00000439681 SBF2Q86WG5 1849 aa9.58□□□□□ -0.88
UBR3-205ENST00000439681 MYL6BP14649 208 aa9.58□□□□□ -0.88
UBR3-205ENST00000439681 CRKLP46109 303 aaKnown RBP9.58□□□□□ -0.88
UBR3-205ENST00000439681 CAMKK2Q96RR4 588 aa9.58□□□□□ -0.88
UBR3-205ENST00000439681 HYPKQ9NX55 129 aa9.58□□□□□ -0.88
UBR3-205ENST00000439681 BTAF1O14981 1849 aa9.58□□□□□ -0.88
UBR3-205ENST00000439681 FRAT1Q92837 279 aaPredicted RBP9.57□□□□□ -0.88
UBR3-205ENST00000439681 CCDC87Q9NVE4 849 aa9.57□□□□□ -0.88
UBR3-205ENST00000439681 TNNQ9UQP3 1299 aa9.57□□□□□ -0.88
UBR3-205ENST00000439681 ZBTB1Q9Y2K1 713 aa9.57□□□□□ -0.88
UBR3-205ENST00000439681 CANXP27824 592 aaKnown RBP9.57□□□□□ -0.88
UBR3-205ENST00000439681 FLIIQ13045 1269 aa9.57□□□□□ -0.88
UBR3-205ENST00000439681 RC3H1Q5TC82 1133 aaKnown RBP9.57□□□□□ -0.88
UBR3-205ENST00000439681 ARHGAP45Q92619 1136 aa9.57□□□□□ -0.88
UBR3-205ENST00000439681 KIF16BQ96L93 1317 aa9.56□□□□□ -0.88
UBR3-205ENST00000439681 CNTNAP4Q9C0A0 1308 aa9.56□□□□□ -0.88
UBR3-205ENST00000439681 EN1Q05925 392 aaPredicted RBP9.56□□□□□ -0.88
UBR3-205ENST00000439681 C20orf194Q5TEA3 1177 aa9.56□□□□□ -0.88
UBR3-205ENST00000439681 ZKSCAN2Q63HK3 967 aa9.56□□□□□ -0.88
UBR3-205ENST00000439681 ILDR2Q71H61 639 aa9.56□□□□□ -0.88
UBR3-205ENST00000439681 CCDC125Q86Z20 511 aa9.56□□□□□ -0.88
UBR3-205ENST00000439681 XAGE3Q8WTP9 111 aa9.56□□□□□ -0.88
UBR3-205ENST00000439681 C5P01031 1676 aa9.56□□□□□ -0.88
UBR3-205ENST00000439681 IPO8O15397 1037 aaKnown RBP9.56□□□□□ -0.88
UBR3-205ENST00000439681 TRIM27P14373 513 aa9.56□□□□□ -0.88
UBR3-205ENST00000439681 EIF5P55010 431 aaKnown RBP9.56□□□□□ -0.88
UBR3-205ENST00000439681 EZH2Q15910 746 aaKnown RBP9.56□□□□□ -0.88
UBR3-205ENST00000439681 ATF7IPQ6VMQ6 1270 aa9.56□□□□□ -0.88
UBR3-205ENST00000439681 COPS6Q7L5N1 327 aa9.56□□□□□ -0.88
UBR3-205ENST00000439681 DEFB132Q7Z7B7 95 aa9.56□□□□□ -0.88
UBR3-205ENST00000439681 PTPRCP08575 1304 aa9.55□□□□□ -0.88
UBR3-205ENST00000439681 IL6STP40189 918 aaPredicted RBP9.55□□□□□ -0.88
UBR3-205ENST00000439681 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.55□□□□□ -0.88
UBR3-205ENST00000439681 KAT6BQ8WYB5 2073 aa9.55□□□□□ -0.88
UBR3-205ENST00000439681 TJP1Q07157 1748 aa9.55□□□□□ -0.88
UBR3-205ENST00000439681 RLBP1P12271 317 aa9.54□□□□□ -0.88
UBR3-205ENST00000439681 AIMP1Q12904 312 aaKnown RBP9.54□□□□□ -0.88
UBR3-205ENST00000439681 SF3B2Q13435 895 aaKnown RBP9.54□□□□□ -0.88
UBR3-205ENST00000439681 TTLL7Q6ZT98 887 aa9.54□□□□□ -0.88
UBR3-205ENST00000439681 SMIM5Q71RC9 77 aa9.54□□□□□ -0.88
UBR3-205ENST00000439681 AMIGO3Q86WK7 504 aa9.54□□□□□ -0.88
UBR3-205ENST00000439681 UPF1Q92900 1129 aaKnown RBP eCLIP9.54□□□□□ -0.88
UBR3-205ENST00000439681 F6X3S4 739 aa9.54□□□□□ -0.88
UBR3-205ENST00000439681 RPS6KA4O75676 772 aa9.54□□□□□ -0.88
UBR3-205ENST00000439681 BAG6P46379 1132 aa9.54□□□□□ -0.88
UBR3-205ENST00000439681 FKBP5Q13451 457 aaPredicted RBP9.54□□□□□ -0.88
UBR3-205ENST00000439681 PDE3AQ14432 1141 aa9.54□□□□□ -0.88
UBR3-205ENST00000439681 API5Q9BZZ5 524 aaKnown RBP9.54□□□□□ -0.88
UBR3-205ENST00000439681 ZNF831Q5JPB2 1677 aa9.54□□□□□ -0.88
UBR3-205ENST00000439681 CICQ96RK0 1608 aaPredicted RBP9.53□□□□□ -0.88
UBR3-205ENST00000439681 PI4KAP2A4QPH2 592 aa9.53□□□□□ -0.88
UBR3-205ENST00000439681 KSR2Q6VAB6 950 aa9.53□□□□□ -0.88
UBR3-205ENST00000439681 DZIP1LQ8IYY4 767 aaKnown RBP9.53□□□□□ -0.88
UBR3-205ENST00000439681 PI4KAP1Q8N8J0 262 aa9.53□□□□□ -0.88
UBR3-205ENST00000439681 PANK1Q8TE04 598 aa9.53□□□□□ -0.88
UBR3-205ENST00000439681 CLUAP1Q96AJ1 413 aa9.53□□□□□ -0.88
UBR3-205ENST00000439681 AKT1S1Q96B36 256 aa9.53□□□□□ -0.88
UBR3-205ENST00000439681 ADCY9O60503 1353 aa9.53□□□□□ -0.88
UBR3-205ENST00000439681 LY75O60449 1722 aa9.53□□□□□ -0.88
UBR3-205ENST00000439681 ANKRD13DQ6ZTN6 518 aa9.53□□□□□ -0.88
UBR3-205ENST00000439681 TNS1Q9HBL0 1735 aaKnown RBP9.52□□□□□ -0.88
UBR3-205ENST00000439681 ABCC4O15439 1325 aa9.52□□□□□ -0.89
UBR3-205ENST00000439681 GNPATO15228 680 aa9.52□□□□□ -0.89
UBR3-205ENST00000439681 IRX6P78412 446 aaPredicted RBP9.52□□□□□ -0.89
UBR3-205ENST00000439681 ZNF827Q17R98 1081 aa9.52□□□□□ -0.89
UBR3-205ENST00000439681 PLBD2Q8NHP8 589 aa9.52□□□□□ -0.89
UBR3-205ENST00000439681 TBC1D2BQ9UPU7 963 aa9.52□□□□□ -0.89
UBR3-205ENST00000439681 ZNF330Q9Y3S2 320 aaPredicted RBP9.52□□□□□ -0.89
UBR3-205ENST00000439681 DDX58O95786 925 aaKnown RBP9.51□□□□□ -0.89
UBR3-205ENST00000439681 HMGB2P26583 209 aaKnown RBP9.51□□□□□ -0.89
UBR3-205ENST00000439681 TMEM57Q8N5G2 664 aa9.51□□□□□ -0.89
UBR3-205ENST00000439681 DNAAF4Q8WXU2 420 aa9.51□□□□□ -0.89
UBR3-205ENST00000439681 AK7Q96M32 723 aa9.51□□□□□ -0.89
UBR3-205ENST00000439681 MAP3K2Q9Y2U5 619 aa9.51□□□□□ -0.89
UBR3-205ENST00000439681 RTCBQ9Y3I0 505 aaKnown RBP9.51□□□□□ -0.89
UBR3-205ENST00000439681 MS4A1P11836 297 aa9.51□□□□□ -0.89
UBR3-205ENST00000439681 INTS3Q68E01 1043 aaKnown RBP9.51□□□□□ -0.89
UBR3-205ENST00000439681 RIC3Q7Z5B4 369 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms