RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 KIF20BQ96Q89 1820 aa16.42■□□□□ 0.22
PCNX3-202ENST00000439247 TRIM6-TRIM34B2RNG4 842 aa16.42■□□□□ 0.22
PCNX3-202ENST00000439247 ADCY5O95622 1261 aa16.42■□□□□ 0.22
PCNX3-202ENST00000439247 ESYT1Q9BSJ8 1104 aa16.42■□□□□ 0.22
PCNX3-202ENST00000439247 SLC4A2P04920 1241 aa16.41■□□□□ 0.22
PCNX3-202ENST00000439247 CNPY2Q9Y2B0 182 aa16.41■□□□□ 0.22
PCNX3-202ENST00000439247 ANKARQ7Z5J8 1434 aa16.41■□□□□ 0.22
PCNX3-202ENST00000439247 CUL4AQ13619 759 aa16.41■□□□□ 0.22
PCNX3-202ENST00000439247 ATP2B3Q16720 1220 aa16.41■□□□□ 0.22
PCNX3-202ENST00000439247 NRKQ7Z2Y5 1582 aa16.4■□□□□ 0.22
PCNX3-202ENST00000439247 NUTM2GQ5VZR2 741 aa16.4■□□□□ 0.22
PCNX3-202ENST00000439247 C19orf44Q9H6X5 657 aa16.4■□□□□ 0.22
PCNX3-202ENST00000439247 PHF8Q9UPP1 1060 aa16.4■□□□□ 0.22
PCNX3-202ENST00000439247 SOX12O15370 315 aa16.4■□□□□ 0.22
PCNX3-202ENST00000439247 ZSCAN20P17040 1043 aaPredicted RBP16.4■□□□□ 0.22
PCNX3-202ENST00000439247 SPDYE4A6NLX3 237 aa16.39■□□□□ 0.21
PCNX3-202ENST00000439247 MAP4K4O95819 1239 aaPredicted RBP16.39■□□□□ 0.21
PCNX3-202ENST00000439247 PIBF1Q8WXW3 757 aa16.39■□□□□ 0.21
PCNX3-202ENST00000439247 SSH2Q76I76 1423 aa16.39■□□□□ 0.21
PCNX3-202ENST00000439247 MTERF4Q7Z6M4 381 aaKnown RBP16.39■□□□□ 0.21
PCNX3-202ENST00000439247 SRCIN1Q9C0H9 1055 aa16.39■□□□□ 0.21
PCNX3-202ENST00000439247 A0A0U1RQG5 324 aaPredicted RBP16.38■□□□□ 0.21
PCNX3-202ENST00000439247 AP5Z1O43299 807 aa16.38■□□□□ 0.21
PCNX3-202ENST00000439247 SULT6B1Q6IMI4 303 aa16.38■□□□□ 0.21
PCNX3-202ENST00000439247 FOXO3O43524 673 aa16.38■□□□□ 0.21
PCNX3-202ENST00000439247 PPP4R3BQ5MIZ7 849 aa16.38■□□□□ 0.21
PCNX3-202ENST00000439247 IGSF3O75054 1194 aa16.37■□□□□ 0.21
PCNX3-202ENST00000439247 DDX17Q92841 729 aaKnown RBP16.37■□□□□ 0.21
PCNX3-202ENST00000439247 SYAP1Q96A49 352 aaPredicted RBP16.37■□□□□ 0.21
PCNX3-202ENST00000439247 KIF24Q5T7B8 1368 aa16.37■□□□□ 0.21
PCNX3-202ENST00000439247 CHMLP26374 656 aa16.37■□□□□ 0.21
PCNX3-202ENST00000439247 LMOD3Q0VAK6 560 aa16.37■□□□□ 0.21
PCNX3-202ENST00000439247 PNMA6EA0A0J9YXQ4 647 aa16.36■□□□□ 0.21
PCNX3-202ENST00000439247 GIMAP6Q6P9H5 292 aa16.36■□□□□ 0.21
PCNX3-202ENST00000439247 SPC24Q8NBT2 197 aa16.36■□□□□ 0.21
PCNX3-202ENST00000439247 NECTIN2Q92692 538 aa16.36■□□□□ 0.21
PCNX3-202ENST00000439247 COG3Q96JB2 828 aa16.36■□□□□ 0.21
PCNX3-202ENST00000439247 XIRP1Q702N8 1843 aaKnown RBP16.36■□□□□ 0.21
PCNX3-202ENST00000439247 FIBPO43427 364 aa16.35■□□□□ 0.21
PCNX3-202ENST00000439247 DMTNQ08495 405 aa16.35■□□□□ 0.21
PCNX3-202ENST00000439247 BCL2L12Q9HB09 334 aa16.35■□□□□ 0.21
PCNX3-202ENST00000439247 PYCARDQ9ULZ3 195 aa16.35■□□□□ 0.21
PCNX3-202ENST00000439247 CPA1P15085 419 aa16.35■□□□□ 0.21
PCNX3-202ENST00000439247 ATF3P18847 181 aa16.35■□□□□ 0.21
PCNX3-202ENST00000439247 MX1P20591 662 aa16.35■□□□□ 0.21
PCNX3-202ENST00000439247 OSBPL3Q9H4L5 887 aa16.35■□□□□ 0.21
PCNX3-202ENST00000439247 C1orf167Q5SNV9 1468 aa16.35■□□□□ 0.21
PCNX3-202ENST00000439247 BCL11BQ9C0K0 894 aaPredicted RBP16.34■□□□□ 0.21
PCNX3-202ENST00000439247 IL1RAPL2Q9NP60 686 aa16.34■□□□□ 0.21
PCNX3-202ENST00000439247 RPAP1Q9BWH6 1393 aaPredicted RBP16.34■□□□□ 0.21
PCNX3-202ENST00000439247 CHL1O00533 1208 aa16.34■□□□□ 0.21
PCNX3-202ENST00000439247 HMMRO75330 724 aa16.34■□□□□ 0.21
PCNX3-202ENST00000439247 MCCP23508 829 aa16.34■□□□□ 0.21
PCNX3-202ENST00000439247 INTS4Q96HW7 963 aaKnown RBP16.34■□□□□ 0.21
PCNX3-202ENST00000439247 KCNF1Q9H3M0 494 aa16.34■□□□□ 0.21
PCNX3-202ENST00000439247 MCM2P49736 904 aa16.33■□□□□ 0.21
PCNX3-202ENST00000439247 KIF3AQ9Y496 699 aa16.33■□□□□ 0.21
PCNX3-202ENST00000439247 OVOS2A0A0J9YW53 1432 aa16.33■□□□□ 0.2
PCNX3-202ENST00000439247 MST1RQ04912 1400 aa16.33■□□□□ 0.2
PCNX3-202ENST00000439247 OVOS2Q6IE36 1432 aa16.33■□□□□ 0.2
PCNX3-202ENST00000439247 SALL3Q9BXA9 1300 aa16.33■□□□□ 0.2
PCNX3-202ENST00000439247 PHF14O94880 888 aa16.33■□□□□ 0.2
PCNX3-202ENST00000439247 PSME1Q06323 249 aa16.32■□□□□ 0.2
PCNX3-202ENST00000439247 CCDC183Q5T5S1 534 aa16.32■□□□□ 0.2
PCNX3-202ENST00000439247 PRIMPOLQ96LW4 560 aa16.32■□□□□ 0.2
PCNX3-202ENST00000439247 LRRCC1Q9C099 1032 aa16.32■□□□□ 0.2
PCNX3-202ENST00000439247 PIK3C2AO00443 1686 aa16.32■□□□□ 0.2
PCNX3-202ENST00000439247 WDR33Q9C0J8 1336 aaKnown RBP16.32■□□□□ 0.2
PCNX3-202ENST00000439247 FKBP5Q13451 457 aaPredicted RBP16.32■□□□□ 0.2
PCNX3-202ENST00000439247 NUTM1Q86Y26 1132 aa16.32■□□□□ 0.2
PCNX3-202ENST00000439247 HMGN5P82970 282 aaKnown RBP16.32■□□□□ 0.2
PCNX3-202ENST00000439247 CHMP3Q9Y3E7 222 aa16.32■□□□□ 0.2
PCNX3-202ENST00000439247 KDM4AO75164 1064 aa16.31■□□□□ 0.2
PCNX3-202ENST00000439247 NLRP6P59044 892 aa16.31■□□□□ 0.2
PCNX3-202ENST00000439247 EIF4A2Q14240 407 aaKnown RBP16.31■□□□□ 0.2
PCNX3-202ENST00000439247 ABTB2Q8N961 1025 aa16.31■□□□□ 0.2
PCNX3-202ENST00000439247 RIOK3O14730 519 aaKnown RBP16.31■□□□□ 0.2
PCNX3-202ENST00000439247 U2AF2P26368 475 aaKnown RBP eCLIP16.31■□□□□ 0.22e-6■□□□□ 11.1
PCNX3-202ENST00000439247 PTPRCP08575 1304 aa16.3■□□□□ 0.2
PCNX3-202ENST00000439247 DDX54Q8TDD1 881 aaKnown RBP16.3■□□□□ 0.2
PCNX3-202ENST00000439247 LARGE1O95461 756 aa16.3■□□□□ 0.2
PCNX3-202ENST00000439247 GNAI2P04899 355 aa16.3■□□□□ 0.2
PCNX3-202ENST00000439247 SYT1P21579 422 aa16.3■□□□□ 0.2
PCNX3-202ENST00000439247 GTF2F1P35269 517 aaKnown RBP eCLIP16.3■□□□□ 0.23e-6■■□□□ 12.3
PCNX3-202ENST00000439247 RASEFQ8IZ41 740 aa16.3■□□□□ 0.2
PCNX3-202ENST00000439247 TTC21AQ8NDW8 1320 aa16.29■□□□□ 0.2
PCNX3-202ENST00000439247 UVSSAQ2YD98 709 aa16.29■□□□□ 0.2
PCNX3-202ENST00000439247 FAM184AQ8NB25 1140 aa16.29■□□□□ 0.2
PCNX3-202ENST00000439247 SPTLC3Q9NUV7 552 aa16.29■□□□□ 0.2
PCNX3-202ENST00000439247 CDK12Q9NYV4 1490 aaPredicted RBP16.29■□□□□ 0.2
PCNX3-202ENST00000439247 KIAA0232Q92628 1395 aa16.29■□□□□ 0.2
PCNX3-202ENST00000439247 ZSCAN22P10073 491 aaPredicted RBP16.28■□□□□ 0.2
PCNX3-202ENST00000439247 AK2P54819 239 aa16.28■□□□□ 0.2
PCNX3-202ENST00000439247 CADPS2Q86UW7 1296 aa16.28■□□□□ 0.2
PCNX3-202ENST00000439247 ANAPC15P60006 121 aa16.28■□□□□ 0.2
PCNX3-202ENST00000439247 DNM1Q05193 864 aaKnown RBP16.28■□□□□ 0.2
PCNX3-202ENST00000439247 HSP90AB2PQ58FF8 381 aa16.28■□□□□ 0.2
PCNX3-202ENST00000439247 LMOD2Q6P5Q4 547 aa16.28■□□□□ 0.2
PCNX3-202ENST00000439247 LRRFIP2Q9Y608 721 aaKnown RBP16.28■□□□□ 0.2
PCNX3-202ENST00000439247 STX6O43752 255 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms