RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 GPBP1L1Q9HC44 474 aaPredicted RBP12.4□□□□□ -0.42
AC011228.1-201ENST00000439027 CCDC87Q9NVE4 849 aa12.4□□□□□ -0.42
AC011228.1-201ENST00000439027 DIAPH1O60610 1272 aaKnown RBP12.39□□□□□ -0.43
AC011228.1-201ENST00000439027 LGR6Q9HBX8 967 aa12.39□□□□□ -0.43
AC011228.1-201ENST00000439027 SRP68Q9UHB9 627 aaKnown RBP12.39□□□□□ -0.43
AC011228.1-201ENST00000439027 CD44P16070 742 aaKnown RBP12.38□□□□□ -0.43
AC011228.1-201ENST00000439027 TGFB2P61812 414 aa12.38□□□□□ -0.43
AC011228.1-201ENST00000439027 DDX10Q13206 875 aaKnown RBP12.38□□□□□ -0.43
AC011228.1-201ENST00000439027 SLC52A2Q9HAB3 445 aa12.38□□□□□ -0.43
AC011228.1-201ENST00000439027 BCS1LQ9Y276 419 aa12.38□□□□□ -0.43
AC011228.1-201ENST00000439027 PER1O15534 1290 aaPredicted RBP12.37□□□□□ -0.43
AC011228.1-201ENST00000439027 RNMTO43148 476 aaKnown RBP12.37□□□□□ -0.43
AC011228.1-201ENST00000439027 DPEP1P16444 411 aa12.37□□□□□ -0.43
AC011228.1-201ENST00000439027 SLC39A6Q13433 755 aa12.37□□□□□ -0.43
AC011228.1-201ENST00000439027 MTHFSDQ2M296 383 aaKnown RBP12.37□□□□□ -0.43
AC011228.1-201ENST00000439027 DNAJC10Q8IXB1 793 aa12.37□□□□□ -0.43
AC011228.1-201ENST00000439027 MYH14Q7Z406 1995 aaKnown RBP12.36□□□□□ -0.43
AC011228.1-201ENST00000439027 U2SURPO15042 1029 aaKnown RBP12.36□□□□□ -0.43
AC011228.1-201ENST00000439027 FCHSD2O94868 740 aa12.36□□□□□ -0.43
AC011228.1-201ENST00000439027 MNX1P50219 401 aaPredicted RBP12.36□□□□□ -0.43
AC011228.1-201ENST00000439027 INTS5Q6P9B9 1019 aaKnown RBP12.36□□□□□ -0.43
AC011228.1-201ENST00000439027 ARHGAP27Q6ZUM4 889 aa12.36□□□□□ -0.43
AC011228.1-201ENST00000439027 CICQ96RK0 1608 aaPredicted RBP12.36□□□□□ -0.43
AC011228.1-201ENST00000439027 ZPR1O75312 459 aa12.35□□□□□ -0.43
AC011228.1-201ENST00000439027 USP42Q9H9J4 1324 aaKnown RBP12.35□□□□□ -0.43
AC011228.1-201ENST00000439027 PXDNLA1KZ92 1463 aa12.34□□□□□ -0.43
AC011228.1-201ENST00000439027 ZNF831Q5JPB2 1677 aa12.34□□□□□ -0.43
AC011228.1-201ENST00000439027 C10orf71Q711Q0 1435 aa12.34□□□□□ -0.43
AC011228.1-201ENST00000439027 ADCY9O60503 1353 aa12.33□□□□□ -0.44
AC011228.1-201ENST00000439027 CYP19A1P11511 503 aaPredicted RBP12.33□□□□□ -0.44
AC011228.1-201ENST00000439027 DDR1Q08345 913 aa12.33□□□□□ -0.44
AC011228.1-201ENST00000439027 USPL1Q5W0Q7 1092 aa12.33□□□□□ -0.44
AC011228.1-201ENST00000439027 DIEXFQ68CQ4 756 aaKnown RBP12.33□□□□□ -0.44
AC011228.1-201ENST00000439027 COL5A3P25940 1745 aaPredicted RBP12.33□□□□□ -0.44
AC011228.1-201ENST00000439027 SCN11AQ9UI33 1791 aa12.33□□□□□ -0.44
AC011228.1-201ENST00000439027 TTC5Q8N0Z6 440 aa12.32□□□□□ -0.44
AC011228.1-201ENST00000439027 PIM2Q9P1W9 311 aa12.32□□□□□ -0.44
AC011228.1-201ENST00000439027 N4BP2Q86UW6 1770 aaPredicted RBP12.32□□□□□ -0.44
AC011228.1-201ENST00000439027 SOS1Q07889 1333 aaPredicted RBP12.32□□□□□ -0.44
AC011228.1-201ENST00000439027 C4AP0C0L4 1744 aa12.31□□□□□ -0.44
AC011228.1-201ENST00000439027 CANXP27824 592 aaKnown RBP12.31□□□□□ -0.44
AC011228.1-201ENST00000439027 TEFQ10587 303 aa12.31□□□□□ -0.44
AC011228.1-201ENST00000439027 DALRD3Q5D0E6 543 aaKnown RBP12.31□□□□□ -0.44
AC011228.1-201ENST00000439027 MIER1Q8N108 512 aa12.31□□□□□ -0.44
AC011228.1-201ENST00000439027 GAS2L2Q8NHY3 880 aa12.31□□□□□ -0.44
AC011228.1-201ENST00000439027 ZBTB1Q9Y2K1 713 aa12.31□□□□□ -0.44
AC011228.1-201ENST00000439027 CEP350Q5VT06 3117 aa12.3□□□□□ -0.44
AC011228.1-201ENST00000439027 GNAT3A8MTJ3 354 aa12.3□□□□□ -0.44
AC011228.1-201ENST00000439027 POLRMTO00411 1230 aaKnown RBP12.3□□□□□ -0.44
AC011228.1-201ENST00000439027 STARD3NLO95772 234 aa12.3□□□□□ -0.44
AC011228.1-201ENST00000439027 KCNA3P22001 575 aa12.3□□□□□ -0.44
AC011228.1-201ENST00000439027 TM4SF1P30408 202 aa12.3□□□□□ -0.44
AC011228.1-201ENST00000439027 CHRNA5P30532 468 aa12.3□□□□□ -0.44
AC011228.1-201ENST00000439027 VSIG10Q8N0Z9 540 aa12.3□□□□□ -0.44
AC011228.1-201ENST00000439027 CFAP53Q96M91 514 aa12.3□□□□□ -0.44
AC011228.1-201ENST00000439027 NARFQ9UHQ1 456 aa12.3□□□□□ -0.44
AC011228.1-201ENST00000439027 NPC1L1Q9UHC9 1359 aa12.3□□□□□ -0.44
AC011228.1-201ENST00000439027 TJP1Q07157 1748 aa12.29□□□□□ -0.44
AC011228.1-201ENST00000439027 NFIXQ14938 502 aa12.29□□□□□ -0.44
AC011228.1-201ENST00000439027 C9orf131Q5VYM1 1079 aa12.29□□□□□ -0.44
AC011228.1-201ENST00000439027 IL17REQ8NFR9 667 aa12.29□□□□□ -0.44
AC011228.1-201ENST00000439027 ZNF330Q9Y3S2 320 aaPredicted RBP12.29□□□□□ -0.44
AC011228.1-201ENST00000439027 KIF13BQ9NQT8 1826 aa12.29□□□□□ -0.44
AC011228.1-201ENST00000439027 BICDL1Q6ZP65 573 aa12.28□□□□□ -0.44
AC011228.1-201ENST00000439027 COL15A1P39059 1388 aa12.28□□□□□ -0.44
AC011228.1-201ENST00000439027 MRC1P22897 1456 aa12.27□□□□□ -0.44
AC011228.1-201ENST00000439027 A0A087WZG4 1122 aa12.27□□□□□ -0.45
AC011228.1-201ENST00000439027 KIF3CO14782 793 aa12.27□□□□□ -0.45
AC011228.1-201ENST00000439027 SERPINB2P05120 415 aa12.27□□□□□ -0.45
AC011228.1-201ENST00000439027 HSPA6P17066 643 aa12.27□□□□□ -0.45
AC011228.1-201ENST00000439027 PRKAR2BP31323 418 aa12.27□□□□□ -0.45
AC011228.1-201ENST00000439027 ZNF496Q96IT1 587 aaPredicted RBP12.27□□□□□ -0.45
AC011228.1-201ENST00000439027 NUDCQ9Y266 331 aa12.27□□□□□ -0.45
AC011228.1-201ENST00000439027 KCPQ6ZWJ8 1503 aa12.27□□□□□ -0.45
AC011228.1-201ENST00000439027 KIAA1551Q9HCM1 1747 aa12.26□□□□□ -0.45
AC011228.1-201ENST00000439027 U2AF1L5P0DN76 240 aaPredicted RBP12.26□□□□□ -0.45
AC011228.1-201ENST00000439027 U2AF1Q01081 240 aaKnown RBP eCLIP12.26□□□□□ -0.45
AC011228.1-201ENST00000439027 ZNF790Q6PG37 636 aa12.26□□□□□ -0.45
AC011228.1-201ENST00000439027 NPM2Q86SE8 214 aaKnown RBP12.26□□□□□ -0.45
AC011228.1-201ENST00000439027 PHACTR3Q96KR7 559 aa12.26□□□□□ -0.45
AC011228.1-201ENST00000439027 TEX13AQ9BXU3 409 aaPredicted RBP12.26□□□□□ -0.45
AC011228.1-201ENST00000439027 BCL2L12Q9HB09 334 aa12.26□□□□□ -0.45
AC011228.1-201ENST00000439027 COL3A1P02461 1466 aaPredicted RBP12.26□□□□□ -0.45
AC011228.1-201ENST00000439027 EIF5P55010 431 aaKnown RBP12.25□□□□□ -0.45
AC011228.1-201ENST00000439027 PLCD3Q8N3E9 789 aa12.25□□□□□ -0.45
AC011228.1-201ENST00000439027 FMNL2Q96PY5 1086 aa12.25□□□□□ -0.45
AC011228.1-201ENST00000439027 NMRK2Q9NPI5 230 aa12.25□□□□□ -0.45
AC011228.1-201ENST00000439027 RNF181Q9P0P0 153 aa12.25□□□□□ -0.45
AC011228.1-201ENST00000439027 FBXO3Q9UK99 471 aa12.25□□□□□ -0.45
AC011228.1-201ENST00000439027 BTBD11A6QL63 1104 aa12.24□□□□□ -0.45
AC011228.1-201ENST00000439027 GABBR2O75899 941 aa12.24□□□□□ -0.45
AC011228.1-201ENST00000439027 PPP2R1AP30153 589 aa12.24□□□□□ -0.45
AC011228.1-201ENST00000439027 VIRMAQ69YN4 1812 aaKnown RBP12.24□□□□□ -0.45
AC011228.1-201ENST00000439027 C2CD5Q86YS7 1000 aa12.24□□□□□ -0.45
AC011228.1-201ENST00000439027 RTF1Q92541 710 aaKnown RBP12.24□□□□□ -0.45
AC011228.1-201ENST00000439027 RSPH6AQ9H0K4 717 aa12.24□□□□□ -0.45
AC011228.1-201ENST00000439027 HEG1Q9ULI3 1381 aa12.24□□□□□ -0.45
AC011228.1-201ENST00000439027 TBC1D2BQ9UPU7 963 aa12.24□□□□□ -0.45
AC011228.1-201ENST00000439027 H0YIN7 160 aa12.23□□□□□ -0.45
AC011228.1-201ENST00000439027 KCNQ3O43525 872 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms