RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 NOS2P35228 1153 aa6.89□□□□□ -1.31
LSM1P1-201ENST00000438629 FOXD4L5Q5VV16 416 aaPredicted RBP6.89□□□□□ -1.31
LSM1P1-201ENST00000438629 AEBP1Q8IUX7 1158 aa6.89□□□□□ -1.31
LSM1P1-201ENST00000438629 CHMP7Q8WUX9 453 aaPredicted RBP6.89□□□□□ -1.31
LSM1P1-201ENST00000438629 C2orf49Q9BVC5 232 aaPredicted RBP6.89□□□□□ -1.31
LSM1P1-201ENST00000438629 ZNF232Q9UNY5 417 aa6.89□□□□□ -1.31
LSM1P1-201ENST00000438629 C21orf2O43822 256 aa6.88□□□□□ -1.31
LSM1P1-201ENST00000438629 MAN1A2O60476 641 aa6.88□□□□□ -1.31
LSM1P1-201ENST00000438629 HIRAP54198 1017 aaPredicted RBP6.88□□□□□ -1.31
LSM1P1-201ENST00000438629 PRICKLE2Q7Z3G6 844 aa6.88□□□□□ -1.31
LSM1P1-201ENST00000438629 L3MBTL2Q969R5 705 aa6.88□□□□□ -1.31
LSM1P1-201ENST00000438629 FIGNL2A6NMB9 653 aa6.87□□□□□ -1.31
LSM1P1-201ENST00000438629 LGR5O75473 907 aa6.87□□□□□ -1.31
LSM1P1-201ENST00000438629 POU4F2Q12837 409 aa6.87□□□□□ -1.31
LSM1P1-201ENST00000438629 NBPF1Q3BBV0 1214 aa6.87□□□□□ -1.31
LSM1P1-201ENST00000438629 TBCELQ5QJ74 424 aa6.87□□□□□ -1.31
LSM1P1-201ENST00000438629 PHLDB3Q6NSJ2 640 aa6.87□□□□□ -1.31
LSM1P1-201ENST00000438629 NBPF10Q6P3W6 841 aaKnown RBP6.87□□□□□ -1.31
LSM1P1-201ENST00000438629 POTEAQ6S8J7 498 aa6.87□□□□□ -1.31
LSM1P1-201ENST00000438629 SLAIN2Q9P270 581 aa6.87□□□□□ -1.31
LSM1P1-201ENST00000438629 FKBP5Q13451 457 aaPredicted RBP6.86□□□□□ -1.31
LSM1P1-201ENST00000438629 C4orf17Q53FE4 359 aa6.86□□□□□ -1.31
LSM1P1-201ENST00000438629 C1orf53Q5VUE5 145 aa6.86□□□□□ -1.31
LSM1P1-201ENST00000438629 AIDAQ96BJ3 306 aa6.86□□□□□ -1.31
LSM1P1-201ENST00000438629 TIMMDC1Q9NPL8 285 aa6.86□□□□□ -1.31
LSM1P1-201ENST00000438629 ZDHHC3Q9NYG2 299 aa6.86□□□□□ -1.31
LSM1P1-201ENST00000438629 DACH1Q9UI36 760 aa6.86□□□□□ -1.31
LSM1P1-201ENST00000438629 GNEQ9Y223 722 aaKnown RBP6.86□□□□□ -1.31
LSM1P1-201ENST00000438629 EML1O00423 815 aa6.85□□□□□ -1.31
LSM1P1-201ENST00000438629 TATP17735 454 aaPredicted RBP6.85□□□□□ -1.31
LSM1P1-201ENST00000438629 HIF1AQ16665 826 aa6.85□□□□□ -1.31
LSM1P1-201ENST00000438629 ZNF295-AS1Q8N0V1 137 aa6.85□□□□□ -1.31
LSM1P1-201ENST00000438629 TRIM47Q96LD4 638 aa6.85□□□□□ -1.31
LSM1P1-201ENST00000438629 GPC6Q9Y625 555 aaPredicted RBP6.85□□□□□ -1.31
LSM1P1-201ENST00000438629 USP3Q9Y6I4 520 aa6.85□□□□□ -1.31
LSM1P1-201ENST00000438629 A0A1B0GTH6 734 aa6.84□□□□□ -1.31
LSM1P1-201ENST00000438629 PHKA2P46019 1235 aa6.84□□□□□ -1.31
LSM1P1-201ENST00000438629 PLA2G4AP47712 749 aa6.84□□□□□ -1.31
LSM1P1-201ENST00000438629 TXNDC2Q86VQ3 553 aa6.84□□□□□ -1.31
LSM1P1-201ENST00000438629 ZDHHC1Q8WTX9 485 aa6.84□□□□□ -1.31
LSM1P1-201ENST00000438629 DNMT3LQ9UJW3 386 aa6.84□□□□□ -1.31
LSM1P1-201ENST00000438629 DYRK1BQ9Y463 629 aa6.84□□□□□ -1.31
LSM1P1-201ENST00000438629 ALDH16A1Q8IZ83 802 aa6.83□□□□□ -1.32
LSM1P1-201ENST00000438629 MYO19Q96H55 970 aa6.83□□□□□ -1.32
LSM1P1-201ENST00000438629 NEUROD4Q9HD90 331 aa6.83□□□□□ -1.32
LSM1P1-201ENST00000438629 EGFL7Q9UHF1 273 aa6.83□□□□□ -1.32
LSM1P1-201ENST00000438629 HCN4Q9Y3Q4 1203 aa6.83□□□□□ -1.32
LSM1P1-201ENST00000438629 PARP3Q9Y6F1 533 aa6.83□□□□□ -1.32
LSM1P1-201ENST00000438629 C11orf95C9JLR9 678 aaPredicted RBP6.82□□□□□ -1.32
LSM1P1-201ENST00000438629 F11P03951 625 aa6.82□□□□□ -1.32
LSM1P1-201ENST00000438629 RHOQP17081 205 aa6.82□□□□□ -1.32
LSM1P1-201ENST00000438629 SF3B2Q13435 895 aaKnown RBP6.82□□□□□ -1.32
LSM1P1-201ENST00000438629 RTN1Q16799 776 aa6.82□□□□□ -1.32
LSM1P1-201ENST00000438629 C16orf46Q6P387 395 aa6.82□□□□□ -1.32
LSM1P1-201ENST00000438629 MKNK1Q9BUB5 465 aa6.82□□□□□ -1.32
LSM1P1-201ENST00000438629 PHACTR1Q9C0D0 580 aa6.82□□□□□ -1.32
LSM1P1-201ENST00000438629 ANKIB1Q9P2G1 1089 aa6.82□□□□□ -1.32
LSM1P1-201ENST00000438629 GMPR2Q9P2T1 348 aaKnown RBP6.82□□□□□ -1.32
LSM1P1-201ENST00000438629 C11orf91Q3C1V1 193 aa6.81□□□□□ -1.32
LSM1P1-201ENST00000438629 PGBD3Q8N328 593 aa6.81□□□□□ -1.32
LSM1P1-201ENST00000438629 GTF3C2Q8WUA4 911 aaPredicted RBP6.81□□□□□ -1.32
LSM1P1-201ENST00000438629 NGLY1Q96IV0 654 aa6.81□□□□□ -1.32
LSM1P1-201ENST00000438629 BRD2P25440 801 aaKnown RBP6.8□□□□□ -1.32
LSM1P1-201ENST00000438629 MSX1P28360 303 aa6.8□□□□□ -1.32
LSM1P1-201ENST00000438629 FKBP4Q02790 459 aaKnown RBP eCLIP6.8□□□□□ -1.32
LSM1P1-201ENST00000438629 NAA30Q147X3 362 aaPredicted RBP6.8□□□□□ -1.32
LSM1P1-201ENST00000438629 ARSJQ5FYB0 599 aaPredicted RBP6.8□□□□□ -1.32
LSM1P1-201ENST00000438629 BICDL1Q6ZP65 573 aa6.8□□□□□ -1.32
LSM1P1-201ENST00000438629 RHPN1Q8TCX5 695 aa6.8□□□□□ -1.32
LSM1P1-201ENST00000438629 GMCL1Q96IK5 515 aa6.8□□□□□ -1.32
LSM1P1-201ENST00000438629 IVNS1ABPQ9Y6Y0 642 aa6.8□□□□□ -1.32
LSM1P1-201ENST00000438629 H7C1W4 665 aa6.79□□□□□ -1.32
LSM1P1-201ENST00000438629 ABL1P00519 1130 aa6.79□□□□□ -1.32
LSM1P1-201ENST00000438629 TXLNAP40222 546 aa6.79□□□□□ -1.32
LSM1P1-201ENST00000438629 PTSQ03393 145 aa6.79□□□□□ -1.32
LSM1P1-201ENST00000438629 LBRQ14739 615 aaKnown RBP6.79□□□□□ -1.32
LSM1P1-201ENST00000438629 COX20Q5RI15 118 aa6.79□□□□□ -1.32
LSM1P1-201ENST00000438629 HELQQ8TDG4 1101 aa6.79□□□□□ -1.32
LSM1P1-201ENST00000438629 GAS2L1Q99501 681 aaPredicted RBP6.79□□□□□ -1.32
LSM1P1-201ENST00000438629 SEPT3Q9UH03 358 aa6.79□□□□□ -1.32
LSM1P1-201ENST00000438629 GJA3Q9Y6H8 435 aa6.79□□□□□ -1.32
LSM1P1-201ENST00000438629 SLC35F4A4IF30 521 aa6.78□□□□□ -1.32
LSM1P1-201ENST00000438629 FAM13AO94988 1023 aa6.78□□□□□ -1.32
LSM1P1-201ENST00000438629 EFHC2Q5JST6 749 aa6.78□□□□□ -1.32
LSM1P1-201ENST00000438629 SH3PXD2AQ5TCZ1 1133 aa6.78□□□□□ -1.32
LSM1P1-201ENST00000438629 ALKBH2Q6NS38 261 aa6.78□□□□□ -1.32
LSM1P1-201ENST00000438629 NLRP8Q86W28 1048 aa6.78□□□□□ -1.32
LSM1P1-201ENST00000438629 CRISPLD1Q9H336 500 aa6.78□□□□□ -1.32
LSM1P1-201ENST00000438629 QTRT2Q9H974 415 aaKnown RBP6.78□□□□□ -1.32
LSM1P1-201ENST00000438629 STIM2Q9P246 746 aa6.78□□□□□ -1.32
LSM1P1-201ENST00000438629 SOBPA7XYQ1 873 aa6.77□□□□□ -1.33
LSM1P1-201ENST00000438629 ICMTO60725 284 aa6.77□□□□□ -1.33
LSM1P1-201ENST00000438629 SNRPBP14678 240 aaKnown RBP6.77□□□□□ -1.33
LSM1P1-201ENST00000438629 TRIM26Q12899 539 aaPredicted RBP6.77□□□□□ -1.33
LSM1P1-201ENST00000438629 CAPN12Q6ZSI9 719 aa6.77□□□□□ -1.33
LSM1P1-201ENST00000438629 ABTB2Q8N961 1025 aa6.77□□□□□ -1.33
LSM1P1-201ENST00000438629 C7orf43Q8WVR3 580 aa6.77□□□□□ -1.33
LSM1P1-201ENST00000438629 ZIC5Q96T25 663 aa6.77□□□□□ -1.33
LSM1P1-201ENST00000438629 GZF1Q9H116 711 aaPredicted RBP6.77□□□□□ -1.33
LSM1P1-201ENST00000438629 DNMT3AQ9Y6K1 912 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms