RNA–Protein interactions for RNA: ENST00000438393.5

BRD1-204, Transcript of bromodomain containing 1, humanhuman

TSL 2

Gene BRD1, Length 3,051 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD1-204ENST00000438393 PDCL3Q9H2J4 239 aa16.37■□□□□ 0.21
BRD1-204ENST00000438393 DDX11L8A8MPP1 907 aa16.36■□□□□ 0.21
BRD1-204ENST00000438393 NCBP3Q53F19 620 aaKnown RBP16.36■□□□□ 0.21
BRD1-204ENST00000438393 GAS2L3Q86XJ1 694 aa16.36■□□□□ 0.21
BRD1-204ENST00000438393 ATRNO75882 1429 aa16.36■□□□□ 0.21
BRD1-204ENST00000438393 KCNQ4P56696 695 aa16.36■□□□□ 0.21
BRD1-204ENST00000438393 RBM6P78332 1123 aaKnown RBP16.36■□□□□ 0.21
BRD1-204ENST00000438393 SLC52A2Q9HAB3 445 aa16.36■□□□□ 0.21
BRD1-204ENST00000438393 RLBP1P12271 317 aa16.35■□□□□ 0.21
BRD1-204ENST00000438393 EIF2S2P20042 333 aaKnown RBP16.35■□□□□ 0.21
BRD1-204ENST00000438393 C22orf23Q9BZE7 217 aa16.35■□□□□ 0.21
BRD1-204ENST00000438393 TMOD3Q9NYL9 352 aa16.35■□□□□ 0.21
BRD1-204ENST00000438393 ASAP1Q9ULH1 1129 aa16.35■□□□□ 0.21
BRD1-204ENST00000438393 SRCAPQ6ZRS2 3230 aa16.35■□□□□ 0.21
BRD1-204ENST00000438393 PIP4K2AP48426 406 aaPredicted RBP16.34■□□□□ 0.21
BRD1-204ENST00000438393 CDCA7Q9BWT1 371 aaPredicted RBP16.34■□□□□ 0.21
BRD1-204ENST00000438393 IFT57Q9NWB7 429 aa16.34■□□□□ 0.21
BRD1-204ENST00000438393 TNS2Q63HR2 1409 aa16.34■□□□□ 0.21
BRD1-204ENST00000438393 CALD1Q05682 793 aaKnown RBP16.34■□□□□ 0.21
BRD1-204ENST00000438393 PIGBQ92521 554 aa16.34■□□□□ 0.21
BRD1-204ENST00000438393 CHL1O00533 1208 aa16.33■□□□□ 0.21
BRD1-204ENST00000438393 HSP90AB1P08238 724 aaKnown RBP16.33■□□□□ 0.21
BRD1-204ENST00000438393 CANXP27824 592 aaKnown RBP16.33■□□□□ 0.21
BRD1-204ENST00000438393 RARSP54136 660 aaKnown RBP16.33■□□□□ 0.21
BRD1-204ENST00000438393 TNNQ9UQP3 1299 aa16.33■□□□□ 0.21
BRD1-204ENST00000438393 CEMIPQ8WUJ3 1361 aa16.33■□□□□ 0.2
BRD1-204ENST00000438393 PARP4Q9UKK3 1724 aaKnown RBP16.33■□□□□ 0.2
BRD1-204ENST00000438393 RBM42Q9BTD8 480 aaKnown RBP16.33■□□□□ 0.2
BRD1-204ENST00000438393 HTATSF1O43719 755 aaKnown RBP16.32■□□□□ 0.2
BRD1-204ENST00000438393 ZNF853P0CG23 659 aa16.32■□□□□ 0.2
BRD1-204ENST00000438393 ANXA1P04083 346 aa16.32■□□□□ 0.2
BRD1-204ENST00000438393 KRT27Q7Z3Y8 459 aa16.32■□□□□ 0.2
BRD1-204ENST00000438393 TTC5Q8N0Z6 440 aa16.32■□□□□ 0.2
BRD1-204ENST00000438393 TWISTNBQ3B726 338 aaPredicted RBP16.31■□□□□ 0.2
BRD1-204ENST00000438393 ZNF790Q6PG37 636 aa16.31■□□□□ 0.2
BRD1-204ENST00000438393 ZNF496Q96IT1 587 aaPredicted RBP16.31■□□□□ 0.2
BRD1-204ENST00000438393 TRIM44Q96DX7 344 aaPredicted RBP16.3■□□□□ 0.2
BRD1-204ENST00000438393 RWDD1Q9H446 243 aaPredicted RBP16.3■□□□□ 0.2
BRD1-204ENST00000438393 TRIM37O94972 964 aa16.3■□□□□ 0.2
BRD1-204ENST00000438393 ZNF428Q96B54 188 aa16.3■□□□□ 0.2
BRD1-204ENST00000438393 LRRC37A3O60309 1634 aa16.29■□□□□ 0.2
BRD1-204ENST00000438393 ZNF330Q9Y3S2 320 aaPredicted RBP16.29■□□□□ 0.2
BRD1-204ENST00000438393 PKD1L3Q7Z443 1732 aa16.29■□□□□ 0.2
BRD1-204ENST00000438393 SHANK3Q9BYB0 1731 aa16.29■□□□□ 0.2
BRD1-204ENST00000438393 MFAP1P55081 439 aaKnown RBP16.28■□□□□ 0.2
BRD1-204ENST00000438393 IL16Q14005 1332 aa16.28■□□□□ 0.2
BRD1-204ENST00000438393 NKX1-1Q15270 411 aaPredicted RBP16.28■□□□□ 0.2
BRD1-204ENST00000438393 KIAA1211Q6ZU35 1233 aa16.28■□□□□ 0.2
BRD1-204ENST00000438393 TNPO1Q92973 898 aaKnown RBP16.28■□□□□ 0.2
BRD1-204ENST00000438393 PPP1R9BQ96SB3 815 aa16.27■□□□□ 0.2
BRD1-204ENST00000438393 ONECUT3O60422 494 aaPredicted RBP16.27■□□□□ 0.2
BRD1-204ENST00000438393 EIF4A1P60842 406 aaKnown RBP16.27■□□□□ 0.2
BRD1-204ENST00000438393 SMC4Q9NTJ3 1288 aa16.27■□□□□ 0.2
BRD1-204ENST00000438393 PRDM4Q9UKN5 801 aa16.27■□□□□ 0.2
BRD1-204ENST00000438393 ERVV-2B6SEH9 535 aa16.27■□□□□ 0.19
BRD1-204ENST00000438393 HSCBQ8IWL3 235 aa16.27■□□□□ 0.19
BRD1-204ENST00000438393 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.26■□□□□ 0.19
BRD1-204ENST00000438393 SMC5Q8IY18 1101 aa16.26■□□□□ 0.19
BRD1-204ENST00000438393 SSH1Q8WYL5 1049 aa16.26■□□□□ 0.19
BRD1-204ENST00000438393 SNX21Q969T3 373 aa16.26■□□□□ 0.19
BRD1-204ENST00000438393 VAMP4O75379 141 aa16.26■□□□□ 0.19
BRD1-204ENST00000438393 ATG3Q9NT62 314 aa16.26■□□□□ 0.19
BRD1-204ENST00000438393 USP16Q9Y5T5 823 aa16.26■□□□□ 0.19
BRD1-204ENST00000438393 OFD1O75665 1012 aa16.25■□□□□ 0.19
BRD1-204ENST00000438393 RGS12O14924 1447 aa16.25■□□□□ 0.19
BRD1-204ENST00000438393 GOLGB1Q14789 3259 aaKnown RBP16.25■□□□□ 0.19
BRD1-204ENST00000438393 RAB3GAP1Q15042 981 aa16.25■□□□□ 0.19
BRD1-204ENST00000438393 HDGFL1Q5TGJ6 251 aa16.24■□□□□ 0.19
BRD1-204ENST00000438393 CIZ1Q9ULV3 898 aaPredicted RBP16.24■□□□□ 0.19
BRD1-204ENST00000438393 MYL6BP14649 208 aa16.24■□□□□ 0.19
BRD1-204ENST00000438393 RBM25P49756 843 aaKnown RBP16.24■□□□□ 0.19
BRD1-204ENST00000438393 TERF1P54274 439 aa16.24■□□□□ 0.19
BRD1-204ENST00000438393 CCDC173Q0VFZ6 552 aa16.24■□□□□ 0.19
BRD1-204ENST00000438393 SKOR2Q2VWA4 1001 aaPredicted RBP16.24■□□□□ 0.19
BRD1-204ENST00000438393 TOGARAM1Q9Y4F4 1720 aa16.23■□□□□ 0.19
BRD1-204ENST00000438393 WNK3Q9BYP7 1800 aa16.23■□□□□ 0.19
BRD1-204ENST00000438393 SMIM5Q71RC9 77 aa16.23■□□□□ 0.19
BRD1-204ENST00000438393 SCN11AQ9UI33 1791 aa16.23■□□□□ 0.19
BRD1-204ENST00000438393 ZSCAN30Q86W11 494 aa16.23■□□□□ 0.19
BRD1-204ENST00000438393 MVPQ14764 893 aaKnown RBP16.22■□□□□ 0.19
BRD1-204ENST00000438393 GIGYF1O75420 1035 aaPredicted RBP16.22■□□□□ 0.19
BRD1-204ENST00000438393 SLC4A2P04920 1241 aa16.22■□□□□ 0.19
BRD1-204ENST00000438393 BRWD3Q6RI45 1802 aa16.22■□□□□ 0.19
BRD1-204ENST00000438393 FMNL2Q96PY5 1086 aa16.22■□□□□ 0.19
BRD1-204ENST00000438393 SLC4A9Q96Q91 983 aa16.22■□□□□ 0.19
BRD1-204ENST00000438393 DOT1LQ8TEK3 1739 aa16.22■□□□□ 0.19
BRD1-204ENST00000438393 AIMP1Q12904 312 aaKnown RBP16.21■□□□□ 0.19
BRD1-204ENST00000438393 PROSER3Q2NL68 480 aa16.21■□□□□ 0.19
BRD1-204ENST00000438393 DNAJC10Q8IXB1 793 aa16.21■□□□□ 0.19
BRD1-204ENST00000438393 CHPF2Q9P2E5 772 aa16.21■□□□□ 0.19
BRD1-204ENST00000438393 BCL9O00512 1426 aa16.21■□□□□ 0.19
BRD1-204ENST00000438393 GBP4Q96PP9 640 aa16.21■□□□□ 0.19
BRD1-204ENST00000438393 A1BGP04217 495 aa16.2■□□□□ 0.18
BRD1-204ENST00000438393 G2E3Q7L622 706 aa16.2■□□□□ 0.18
BRD1-204ENST00000438393 THSD7AQ9UPZ6 1657 aa16.2■□□□□ 0.18
BRD1-204ENST00000438393 ATP6V1AP38606 617 aa16.2■□□□□ 0.18
BRD1-204ENST00000438393 HDAC1Q13547 482 aaPredicted RBP16.2■□□□□ 0.18
BRD1-204ENST00000438393 FAM196AQ6ZSG2 479 aa16.2■□□□□ 0.18
BRD1-204ENST00000438393 PHAXQ9H814 394 aaKnown RBP16.2■□□□□ 0.18
BRD1-204ENST00000438393 NOB1Q9ULX3 412 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms