RNA–Protein interactions for RNA: ENST00000437516.1

HLA-N-201, Transcript of major histocompatibility complex, class I, N (pseudogene), humanhuman

BASIC

Gene HLA-N, Length 135 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-N-201ENST00000437516 ATP6V1DQ9Y5K8 247 aa5.18□□□□□ -1.58
HLA-N-201ENST00000437516 SNX14Q9Y5W7 946 aa5.18□□□□□ -1.58
HLA-N-201ENST00000437516 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.18□□□□□ -1.58
HLA-N-201ENST00000437516 USP42Q9H9J4 1324 aaKnown RBP5.18□□□□□ -1.58
HLA-N-201ENST00000437516 SRCAPQ6ZRS2 3230 aa5.18□□□□□ -1.58
HLA-N-201ENST00000437516 TNRQ92752 1358 aa5.17□□□□□ -1.58
HLA-N-201ENST00000437516 ROBO2Q9HCK4 1378 aa5.17□□□□□ -1.58
HLA-N-201ENST00000437516 PEAK1Q9H792 1746 aa5.17□□□□□ -1.58
HLA-N-201ENST00000437516 DLG5Q8TDM6 1919 aa5.17□□□□□ -1.58
HLA-N-201ENST00000437516 GNAT3A8MTJ3 354 aa5.17□□□□□ -1.58
HLA-N-201ENST00000437516 FOXO3O43524 673 aa5.17□□□□□ -1.58
HLA-N-201ENST00000437516 F13A1P00488 732 aa5.17□□□□□ -1.58
HLA-N-201ENST00000437516 UBTFL1P0CB47 393 aaPredicted RBP5.17□□□□□ -1.58
HLA-N-201ENST00000437516 PDIA4P13667 645 aaKnown RBP5.17□□□□□ -1.58
HLA-N-201ENST00000437516 AMPHP49418 695 aa5.17□□□□□ -1.58
HLA-N-201ENST00000437516 AK2P54819 239 aa5.17□□□□□ -1.58
HLA-N-201ENST00000437516 UBE2HP62256 183 aa5.17□□□□□ -1.58
HLA-N-201ENST00000437516 FAM69CQ0P6D2 419 aa5.17□□□□□ -1.58
HLA-N-201ENST00000437516 TAF7Q15545 349 aaPredicted RBP5.17□□□□□ -1.58
HLA-N-201ENST00000437516 NOL8Q76FK4 1167 aaKnown RBP5.17□□□□□ -1.58
HLA-N-201ENST00000437516 MYRIPQ8NFW9 859 aa5.17□□□□□ -1.58
HLA-N-201ENST00000437516 PI4K2BQ8TCG2 481 aa5.17□□□□□ -1.58
HLA-N-201ENST00000437516 RHPN1Q8TCX5 695 aa5.17□□□□□ -1.58
HLA-N-201ENST00000437516 RUFY2Q8WXA3 655 aa5.17□□□□□ -1.58
HLA-N-201ENST00000437516 PIBF1Q8WXW3 757 aa5.17□□□□□ -1.58
HLA-N-201ENST00000437516 KIF1BPQ96EK5 621 aa5.17□□□□□ -1.58
HLA-N-201ENST00000437516 PRIMPOLQ96LW4 560 aa5.17□□□□□ -1.58
HLA-N-201ENST00000437516 LSG1Q9H089 658 aaKnown RBP5.17□□□□□ -1.58
HLA-N-201ENST00000437516 USP44Q9H0E7 712 aa5.17□□□□□ -1.58
HLA-N-201ENST00000437516 ESF1Q9H501 851 aaKnown RBP5.17□□□□□ -1.58
HLA-N-201ENST00000437516 FAM13BQ9NYF5 915 aa5.17□□□□□ -1.58
HLA-N-201ENST00000437516 LIMCH1Q9UPQ0 1083 aa5.17□□□□□ -1.58
HLA-N-201ENST00000437516 SMC3Q9UQE7 1217 aa5.17□□□□□ -1.58
HLA-N-201ENST00000437516 LRRFIP2Q9Y608 721 aaKnown RBP5.17□□□□□ -1.58
HLA-N-201ENST00000437516 TOPAZ1Q8N9V7 1692 aa5.17□□□□□ -1.58
HLA-N-201ENST00000437516 RAD50Q92878 1312 aa5.17□□□□□ -1.58
HLA-N-201ENST00000437516 NALCNQ8IZF0 1738 aa5.17□□□□□ -1.58
HLA-N-201ENST00000437516 TMEM2Q9UHN6 1383 aa5.16□□□□□ -1.58
HLA-N-201ENST00000437516 PLEKHG1Q9ULL1 1385 aa5.16□□□□□ -1.58
HLA-N-201ENST00000437516 LRRC37A3O60309 1634 aa5.16□□□□□ -1.58
HLA-N-201ENST00000437516 ADAMTS13Q76LX8 1427 aa5.16□□□□□ -1.58
HLA-N-201ENST00000437516 STX6O43752 255 aa5.16□□□□□ -1.58
HLA-N-201ENST00000437516 KDM4AO75164 1064 aa5.16□□□□□ -1.58
HLA-N-201ENST00000437516 SURF6O75683 361 aaKnown RBP5.16□□□□□ -1.58
HLA-N-201ENST00000437516 ADCY5O95622 1261 aa5.16□□□□□ -1.58
HLA-N-201ENST00000437516 GTF2F1P35269 517 aaKnown RBP eCLIP5.16□□□□□ -1.58
HLA-N-201ENST00000437516 HMGN5P82970 282 aaKnown RBP5.16□□□□□ -1.58
HLA-N-201ENST00000437516 MLECQ14165 292 aa5.16□□□□□ -1.58
HLA-N-201ENST00000437516 NOLC1Q14978 699 aaKnown RBP eCLIP5.16□□□□□ -1.58
HLA-N-201ENST00000437516 DNTTIP2Q5QJE6 756 aaKnown RBP5.16□□□□□ -1.58
HLA-N-201ENST00000437516 TSHZ3Q63HK5 1081 aa5.16□□□□□ -1.58
HLA-N-201ENST00000437516 NUTM1Q86Y26 1132 aa5.16□□□□□ -1.58
HLA-N-201ENST00000437516 SMAP1Q8IYB5 467 aaPredicted RBP5.16□□□□□ -1.58
HLA-N-201ENST00000437516 KCNB2Q92953 911 aa5.16□□□□□ -1.58
HLA-N-201ENST00000437516 FUCA2Q9BTY2 467 aa5.16□□□□□ -1.58
HLA-N-201ENST00000437516 UPF3BQ9BZI7 483 aaKnown RBP5.16□□□□□ -1.58
HLA-N-201ENST00000437516 TM6SF1Q9BZW5 370 aa5.16□□□□□ -1.58
HLA-N-201ENST00000437516 GDPD2Q9HCC8 539 aa5.16□□□□□ -1.58
HLA-N-201ENST00000437516 IL1RAPL2Q9NP60 686 aa5.16□□□□□ -1.58
HLA-N-201ENST00000437516 CNPY2Q9Y2B0 182 aa5.16□□□□□ -1.58
HLA-N-201ENST00000437516 TTC41PQ6P2S7 1318 aa5.16□□□□□ -1.58
HLA-N-201ENST00000437516 MAP3K5Q99683 1374 aa5.16□□□□□ -1.58
HLA-N-201ENST00000437516 XRN1Q8IZH2 1706 aaKnown RBP5.15□□□□□ -1.58
HLA-N-201ENST00000437516 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.15□□□□□ -1.58
HLA-N-201ENST00000437516 GLRX3O76003 335 aaKnown RBP5.15□□□□□ -1.59
HLA-N-201ENST00000437516 HOXB7P09629 217 aa5.15□□□□□ -1.59
HLA-N-201ENST00000437516 SYT1P21579 422 aa5.15□□□□□ -1.59
HLA-N-201ENST00000437516 HDGFL1Q5TGJ6 251 aa5.15□□□□□ -1.59
HLA-N-201ENST00000437516 VPS53Q5VIR6 699 aa5.15□□□□□ -1.59
HLA-N-201ENST00000437516 PLPPR3Q6T4P5 718 aa5.15□□□□□ -1.59
HLA-N-201ENST00000437516 RUFY3Q7L099 469 aa5.15□□□□□ -1.59
HLA-N-201ENST00000437516 PPP1R42Q7Z4L9 355 aa5.15□□□□□ -1.59
HLA-N-201ENST00000437516 IL17REQ8NFR9 667 aa5.15□□□□□ -1.59
HLA-N-201ENST00000437516 NECTIN2Q92692 538 aa5.15□□□□□ -1.59
HLA-N-201ENST00000437516 IL25Q9H293 177 aa5.15□□□□□ -1.59
HLA-N-201ENST00000437516 SH2B1Q9NRF2 756 aaPredicted RBP5.15□□□□□ -1.59
HLA-N-201ENST00000437516 SPTLC3Q9NUV7 552 aa5.15□□□□□ -1.59
HLA-N-201ENST00000437516 USP25Q9UHP3 1055 aa5.15□□□□□ -1.59
HLA-N-201ENST00000437516 HDAC5Q9UQL6 1122 aa5.15□□□□□ -1.59
HLA-N-201ENST00000437516 CEP170BQ9Y4F5 1589 aaPredicted RBP5.15□□□□□ -1.59
HLA-N-201ENST00000437516 DIP2BQ9P265 1576 aa5.14□□□□□ -1.59
HLA-N-201ENST00000437516 NUTM2FA1L443 756 aa5.14□□□□□ -1.59
HLA-N-201ENST00000437516 GOLGA6L6A8MZA4 724 aa5.14□□□□□ -1.59
HLA-N-201ENST00000437516 HIP1O00291 1037 aa5.14□□□□□ -1.59
HLA-N-201ENST00000437516 SOX12O15370 315 aa5.14□□□□□ -1.59
HLA-N-201ENST00000437516 MAP4K4O95819 1239 aaPredicted RBP5.14□□□□□ -1.59
HLA-N-201ENST00000437516 HCLS1P14317 486 aaPredicted RBP5.14□□□□□ -1.59
HLA-N-201ENST00000437516 GJB2P29033 226 aa5.14□□□□□ -1.59
HLA-N-201ENST00000437516 HOXC9P31274 260 aa5.14□□□□□ -1.59
HLA-N-201ENST00000437516 MTX1Q13505 466 aa5.14□□□□□ -1.59
HLA-N-201ENST00000437516 FOXD4L6Q3SYB3 417 aaPredicted RBP5.14□□□□□ -1.59
HLA-N-201ENST00000437516 BEND3Q5T5X7 828 aa5.14□□□□□ -1.59
HLA-N-201ENST00000437516 FOXD4L3Q6VB84 417 aaPredicted RBP5.14□□□□□ -1.59
HLA-N-201ENST00000437516 RASEFQ8IZ41 740 aa5.14□□□□□ -1.59
HLA-N-201ENST00000437516 NGDNQ8NEJ9 315 aaKnown RBP5.14□□□□□ -1.59
HLA-N-201ENST00000437516 CCDC94Q9BW85 323 aaPredicted RBP5.14□□□□□ -1.59
HLA-N-201ENST00000437516 ALDH8A1Q9H2A2 487 aaPredicted RBP5.14□□□□□ -1.59
HLA-N-201ENST00000437516 PHAXQ9H814 394 aaKnown RBP5.14□□□□□ -1.59
HLA-N-201ENST00000437516 ZSWIM6Q9HCJ5 1215 aa5.14□□□□□ -1.59
HLA-N-201ENST00000437516 DIAPH3Q9NSV4 1193 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms