RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 KSR2Q6VAB6 950 aa19.19■□□□□ 0.66
SGCE-205ENST00000437425 SHANK3Q9BYB0 1731 aa19.18■□□□□ 0.66
SGCE-205ENST00000437425 SLC39A6Q13433 755 aa19.18■□□□□ 0.66
SGCE-205ENST00000437425 ANKRD45Q5TZF3 282 aa19.18■□□□□ 0.66
SGCE-205ENST00000437425 ZNF496Q96IT1 587 aaPredicted RBP19.18■□□□□ 0.66
SGCE-205ENST00000437425 PI4KAP2A4QPH2 592 aa19.17■□□□□ 0.66
SGCE-205ENST00000437425 UBTFL1P0CB47 393 aaPredicted RBP19.17■□□□□ 0.66
SGCE-205ENST00000437425 PI4KAP1Q8N8J0 262 aa19.17■□□□□ 0.66
SGCE-205ENST00000437425 BEND3Q5T5X7 828 aa19.16■□□□□ 0.66
SGCE-205ENST00000437425 DDX54Q8TDD1 881 aaKnown RBP19.16■□□□□ 0.66
SGCE-205ENST00000437425 LRP6O75581 1613 aa19.15■□□□□ 0.66
SGCE-205ENST00000437425 LAMB4A4D0S4 1761 aa19.15■□□□□ 0.66
SGCE-205ENST00000437425 NWD2Q9ULI1 1742 aa19.15■□□□□ 0.66
SGCE-205ENST00000437425 ADCY9O60503 1353 aa19.15■□□□□ 0.66
SGCE-205ENST00000437425 PAPPAQ13219 1627 aa19.15■□□□□ 0.66
SGCE-205ENST00000437425 EIF5BO60841 1220 aaKnown RBP19.15■□□□□ 0.66
SGCE-205ENST00000437425 USP44Q9H0E7 712 aa19.15■□□□□ 0.66
SGCE-205ENST00000437425 UBR2Q8IWV8 1755 aa19.14■□□□□ 0.65
SGCE-205ENST00000437425 EXOC5O00471 708 aa19.14■□□□□ 0.65
SGCE-205ENST00000437425 ATP8B2P98198 1209 aa19.14■□□□□ 0.65
SGCE-205ENST00000437425 PDIA6Q15084 440 aa19.14■□□□□ 0.65
SGCE-205ENST00000437425 LNPKQ9C0E8 428 aa19.14■□□□□ 0.65
SGCE-205ENST00000437425 TMOD3Q9NYL9 352 aa19.14■□□□□ 0.65
SGCE-205ENST00000437425 C5P01031 1676 aa19.14■□□□□ 0.65
SGCE-205ENST00000437425 TNS2Q63HR2 1409 aa19.14■□□□□ 0.65
SGCE-205ENST00000437425 LINS1Q8NG48 757 aa19.13■□□□□ 0.65
SGCE-205ENST00000437425 TEX13AQ9BXU3 409 aaPredicted RBP19.13■□□□□ 0.65
SGCE-205ENST00000437425 USP35Q9P2H5 1018 aa19.13■□□□□ 0.65
SGCE-205ENST00000437425 MAP3K2Q9Y2U5 619 aa19.13■□□□□ 0.65
SGCE-205ENST00000437425 NEXNQ0ZGT2 675 aa19.12■□□□□ 0.65
SGCE-205ENST00000437425 UPF2Q9HAU5 1272 aaKnown RBP19.12■□□□□ 0.65
SGCE-205ENST00000437425 NRAPQ86VF7 1730 aa19.12■□□□□ 0.65
SGCE-205ENST00000437425 JCADQ9P266 1359 aa19.12■□□□□ 0.65
SGCE-205ENST00000437425 WNK3Q9BYP7 1800 aa19.12■□□□□ 0.65
SGCE-205ENST00000437425 PRAMEF22A3QJZ6 481 aa19.11■□□□□ 0.65
SGCE-205ENST00000437425 BMP2KLQ5H9B9 411 aa19.11■□□□□ 0.65
SGCE-205ENST00000437425 VSIG10Q8N0Z9 540 aa19.11■□□□□ 0.65
SGCE-205ENST00000437425 SPATA31A1Q5TZJ5 1347 aa19.11■□□□□ 0.65
SGCE-205ENST00000437425 PROSER3Q2NL68 480 aa19.1■□□□□ 0.65
SGCE-205ENST00000437425 DDRGK1Q96HY6 314 aa19.1■□□□□ 0.65
SGCE-205ENST00000437425 SLIT2O94813 1529 aa19.1■□□□□ 0.65
SGCE-205ENST00000437425 KCPQ6ZWJ8 1503 aa19.1■□□□□ 0.65
SGCE-205ENST00000437425 ADAMTS2O95450 1211 aa19.1■□□□□ 0.65
SGCE-205ENST00000437425 RIC3Q7Z5B4 369 aa19.1■□□□□ 0.65
SGCE-205ENST00000437425 ANXA1P04083 346 aa19.09■□□□□ 0.65
SGCE-205ENST00000437425 BARGINQ6ZT62 677 aa19.09■□□□□ 0.65
SGCE-205ENST00000437425 IPO9Q96P70 1041 aaKnown RBP19.09■□□□□ 0.65
SGCE-205ENST00000437425 USP16Q9Y5T5 823 aa19.09■□□□□ 0.65
SGCE-205ENST00000437425 LRRFIP2Q9Y608 721 aaKnown RBP19.09■□□□□ 0.65
SGCE-205ENST00000437425 GLI3P10071 1580 aa19.09■□□□□ 0.65
SGCE-205ENST00000437425 C9orf78Q9NZ63 289 aaPredicted RBP19.08■□□□□ 0.64
SGCE-205ENST00000437425 UTYO14607 1347 aa19.08■□□□□ 0.64
SGCE-205ENST00000437425 RAB11FIP3O75154 756 aa19.07■□□□□ 0.64
SGCE-205ENST00000437425 HSP90AB4PQ58FF6 505 aa19.07■□□□□ 0.64
SGCE-205ENST00000437425 ANKRD13DQ6ZTN6 518 aa19.07■□□□□ 0.64
SGCE-205ENST00000437425 SSH3Q8TE77 659 aa19.07■□□□□ 0.64
SGCE-205ENST00000437425 SPATA31A5Q5VU36 1347 aa19.07■□□□□ 0.64
SGCE-205ENST00000437425 SPATA31A7Q8IWB4 1347 aa19.07■□□□□ 0.64
SGCE-205ENST00000437425 TOGARAM1Q9Y4F4 1720 aa19.06■□□□□ 0.64
SGCE-205ENST00000437425 MTX1Q13505 466 aa19.06■□□□□ 0.64
SGCE-205ENST00000437425 COPS6Q7L5N1 327 aa19.06■□□□□ 0.64
SGCE-205ENST00000437425 LRP10Q7Z4F1 713 aa19.06■□□□□ 0.64
SGCE-205ENST00000437425 XAGE3Q8WTP9 111 aa19.06■□□□□ 0.64
SGCE-205ENST00000437425 METTL22Q9BUU2 404 aaPredicted RBP19.06■□□□□ 0.64
SGCE-205ENST00000437425 SPATA31A6Q5VVP1 1343 aa19.06■□□□□ 0.64
SGCE-205ENST00000437425 MYL6BP14649 208 aa19.05■□□□□ 0.64
SGCE-205ENST00000437425 AIMP1Q12904 312 aaKnown RBP19.05■□□□□ 0.64
SGCE-205ENST00000437425 NUTM2BA6NNL0 878 aaPredicted RBP19.05■□□□□ 0.64
SGCE-205ENST00000437425 NUTM2EB1AL46 878 aaPredicted RBP19.05■□□□□ 0.64
SGCE-205ENST00000437425 GRM8O00222 908 aa19.05■□□□□ 0.64
SGCE-205ENST00000437425 POLA2Q14181 598 aa19.05■□□□□ 0.64
SGCE-205ENST00000437425 DDB1Q16531 1140 aa19.05■□□□□ 0.64
SGCE-205ENST00000437425 NUTM2AQ8IVF1 878 aaPredicted RBP19.05■□□□□ 0.64
SGCE-205ENST00000437425 PLBD2Q8NHP8 589 aa19.05■□□□□ 0.64
SGCE-205ENST00000437425 BCL9O00512 1426 aa19.04■□□□□ 0.64
SGCE-205ENST00000437425 UNC5CLQ8IV45 518 aa19.04■□□□□ 0.64
SGCE-205ENST00000437425 LRRCC1Q9C099 1032 aa19.04■□□□□ 0.64
SGCE-205ENST00000437425 STARD3NLO95772 234 aa19.03■□□□□ 0.64
SGCE-205ENST00000437425 NBPF7P0C2Y1 421 aaPredicted RBP19.03■□□□□ 0.64
SGCE-205ENST00000437425 NPM2Q86SE8 214 aaKnown RBP19.03■□□□□ 0.64
SGCE-205ENST00000437425 PIGBQ92521 554 aa19.03■□□□□ 0.64
SGCE-205ENST00000437425 PNMA6EA0A0J9YXQ4 647 aa19.02■□□□□ 0.64
SGCE-205ENST00000437425 PLEKHM2Q8IWE5 1019 aa19.02■□□□□ 0.64
SGCE-205ENST00000437425 OSBPL3Q9H4L5 887 aa19.02■□□□□ 0.64
SGCE-205ENST00000437425 COL15A1P39059 1388 aa19.02■□□□□ 0.63
SGCE-205ENST00000437425 NEURL1BA8MQ27 555 aa19.01■□□□□ 0.63
SGCE-205ENST00000437425 PPP1R42Q7Z4L9 355 aa19.01■□□□□ 0.63
SGCE-205ENST00000437425 ITGB4P16144 1822 aa19.01■□□□□ 0.63
SGCE-205ENST00000437425 SRGAP3O43295 1099 aa19■□□□□ 0.63
SGCE-205ENST00000437425 PTCD1O75127 700 aaKnown RBP19■□□□□ 0.63
SGCE-205ENST00000437425 ATG3Q9NT62 314 aa19■□□□□ 0.63
SGCE-205ENST00000437425 GCKRQ14397 625 aa19■□□□□ 0.63
SGCE-205ENST00000437425 VPS72Q15906 364 aa19■□□□□ 0.63
SGCE-205ENST00000437425 NOP58Q9Y2X3 529 aaKnown RBP19■□□□□ 0.63
SGCE-205ENST00000437425 IGKV5-2P06315 115 aa18.99■□□□□ 0.63
SGCE-205ENST00000437425 CWF19L2Q2TBE0 894 aaKnown RBP18.99■□□□□ 0.63
SGCE-205ENST00000437425 TTC22Q5TAA0 569 aa18.99■□□□□ 0.63
SGCE-205ENST00000437425 ERC1Q8IUD2 1116 aa18.99■□□□□ 0.63
SGCE-205ENST00000437425 FNBP4Q8N3X1 1017 aaPredicted RBP18.99■□□□□ 0.63
SGCE-205ENST00000437425 KIF1BPQ96EK5 621 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms