RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 CASC1Q6TDU7 716 aa14.99□□□□□ -0.01
TMEM116-202ENST00000437003 NALCNQ8IZF0 1738 aa14.99□□□□□ -0.01
TMEM116-202ENST00000437003 CRB1P82279 1406 aa14.99□□□□□ -0.01
TMEM116-202ENST00000437003 ARHGEF10O15013 1369 aa14.99□□□□□ -0.01
TMEM116-202ENST00000437003 FLT4P35916 1363 aa14.99□□□□□ -0.01
TMEM116-202ENST00000437003 USP25Q9UHP3 1055 aa14.99□□□□□ -0.01
TMEM116-202ENST00000437003 TBX22Q9Y458 520 aa14.99□□□□□ -0.01
TMEM116-202ENST00000437003 TCHHQ07283 1943 aa14.98□□□□□ -0.01
TMEM116-202ENST00000437003 SBNO1A3KN83 1393 aa14.98□□□□□ -0.01
TMEM116-202ENST00000437003 TMX3Q96JJ7 454 aa14.98□□□□□ -0.01
TMEM116-202ENST00000437003 EYA1Q99502 592 aa14.98□□□□□ -0.01
TMEM116-202ENST00000437003 EXOC6BQ9Y2D4 811 aa14.98□□□□□ -0.01
TMEM116-202ENST00000437003 RGPD1P0DJD0 1748 aa14.98□□□□□ -0.01
TMEM116-202ENST00000437003 GADD45BO75293 160 aaPredicted RBP14.97□□□□□ -0.01
TMEM116-202ENST00000437003 NLRP6P59044 892 aa14.97□□□□□ -0.01
TMEM116-202ENST00000437003 NOLC1Q14978 699 aaKnown RBP eCLIP14.97□□□□□ -0.01
TMEM116-202ENST00000437003 PPP4R3BQ5MIZ7 849 aa14.97□□□□□ -0.01
TMEM116-202ENST00000437003 ZFP91Q96JP5 570 aaPredicted RBP14.96□□□□□ -0.01
TMEM116-202ENST00000437003 REC8O95072 547 aa14.96□□□□□ -0.01
TMEM116-202ENST00000437003 NUTM2GQ5VZR2 741 aa14.96□□□□□ -0.01
TMEM116-202ENST00000437003 SPDYE4A6NLX3 237 aa14.96□□□□□ -0.02
TMEM116-202ENST00000437003 ATP2B3Q16720 1220 aa14.96□□□□□ -0.02
TMEM116-202ENST00000437003 THEMISQ8N1K5 641 aaPredicted RBP14.95□□□□□ -0.02
TMEM116-202ENST00000437003 HMMRO75330 724 aa14.95□□□□□ -0.02
TMEM116-202ENST00000437003 PIBF1Q8WXW3 757 aa14.95□□□□□ -0.02
TMEM116-202ENST00000437003 KDRP35968 1356 aa14.95□□□□□ -0.02
TMEM116-202ENST00000437003 RIMS1Q86UR5 1692 aaKnown RBP14.94□□□□□ -0.02
TMEM116-202ENST00000437003 ERC2O15083 957 aa14.94□□□□□ -0.02
TMEM116-202ENST00000437003 SYAP1Q96A49 352 aaPredicted RBP14.94□□□□□ -0.02
TMEM116-202ENST00000437003 RGPD8O14715 1765 aaPredicted RBP14.94□□□□□ -0.02
TMEM116-202ENST00000437003 IGSF1Q8N6C5 1336 aa14.94□□□□□ -0.02
TMEM116-202ENST00000437003 BRD1O95696 1058 aa14.94□□□□□ -0.02
TMEM116-202ENST00000437003 FKBP5Q13451 457 aaPredicted RBP14.94□□□□□ -0.02
TMEM116-202ENST00000437003 UTP14CQ5TAP6 766 aaKnown RBP14.94□□□□□ -0.02
TMEM116-202ENST00000437003 STK31Q9BXU1 1019 aa14.94□□□□□ -0.02
TMEM116-202ENST00000437003 ADCY5O95622 1261 aa14.93□□□□□ -0.02
TMEM116-202ENST00000437003 LTV1Q96GA3 475 aaPredicted RBP14.93□□□□□ -0.02
TMEM116-202ENST00000437003 PRIMPOLQ96LW4 560 aa14.93□□□□□ -0.02
TMEM116-202ENST00000437003 KIF3AQ9Y496 699 aa14.93□□□□□ -0.02
TMEM116-202ENST00000437003 DIP2AQ14689 1571 aa14.93□□□□□ -0.02
TMEM116-202ENST00000437003 FMN2Q9NZ56 1722 aa14.93□□□□□ -0.02
TMEM116-202ENST00000437003 CCT4P50991 539 aaKnown RBP14.93□□□□□ -0.02
TMEM116-202ENST00000437003 SLIT1O75093 1534 aa14.93□□□□□ -0.02
TMEM116-202ENST00000437003 HCLS1P14317 486 aaPredicted RBP14.92□□□□□ -0.02
TMEM116-202ENST00000437003 PDE1AP54750 535 aa14.92□□□□□ -0.02
TMEM116-202ENST00000437003 HMGN5P82970 282 aaKnown RBP14.92□□□□□ -0.02
TMEM116-202ENST00000437003 CEP170BQ9Y4F5 1589 aaPredicted RBP14.92□□□□□ -0.02
TMEM116-202ENST00000437003 ARHGAP23Q9P227 1491 aa14.92□□□□□ -0.02
TMEM116-202ENST00000437003 RILPL2Q969X0 211 aa14.92□□□□□ -0.02
TMEM116-202ENST00000437003 BCL2L12Q9HB09 334 aa14.92□□□□□ -0.02
TMEM116-202ENST00000437003 USP48Q86UV5 1035 aa14.91□□□□□ -0.02
TMEM116-202ENST00000437003 ABTB2Q8N961 1025 aa14.91□□□□□ -0.02
TMEM116-202ENST00000437003 PALD1Q9ULE6 856 aa14.91□□□□□ -0.02
TMEM116-202ENST00000437003 GNAT3A8MTJ3 354 aa14.91□□□□□ -0.02
TMEM116-202ENST00000437003 TRIM6-TRIM34B2RNG4 842 aa14.91□□□□□ -0.02
TMEM116-202ENST00000437003 GNAI2P04899 355 aa14.91□□□□□ -0.02
TMEM116-202ENST00000437003 KCNA6P17658 529 aa14.91□□□□□ -0.02
TMEM116-202ENST00000437003 UPF3BQ9BZI7 483 aaKnown RBP14.91□□□□□ -0.02
TMEM116-202ENST00000437003 HOXC9P31274 260 aa14.9□□□□□ -0.02
TMEM116-202ENST00000437003 PNMA6EA0A0J9YXQ4 647 aa14.9□□□□□ -0.02
TMEM116-202ENST00000437003 PHF14O94880 888 aa14.9□□□□□ -0.02
TMEM116-202ENST00000437003 HTATSF1O43719 755 aaKnown RBP14.9□□□□□ -0.02
TMEM116-202ENST00000437003 PIK3C2AO00443 1686 aa14.89□□□□□ -0.03
TMEM116-202ENST00000437003 FLIIQ13045 1269 aa14.89□□□□□ -0.03
TMEM116-202ENST00000437003 CCDC30Q5VVM6 783 aa14.89□□□□□ -0.03
TMEM116-202ENST00000437003 U2AF2P26368 475 aaKnown RBP eCLIP14.88□□□□□ -0.03
TMEM116-202ENST00000437003 PDCL2Q8N4E4 241 aa14.88□□□□□ -0.03
TMEM116-202ENST00000437003 LRRCC1Q9C099 1032 aa14.88□□□□□ -0.03
TMEM116-202ENST00000437003 ANO2Q9NQ90 1003 aa14.88□□□□□ -0.03
TMEM116-202ENST00000437003 CCDC9Q9Y3X0 531 aaKnown RBP14.88□□□□□ -0.03
TMEM116-202ENST00000437003 GTF2F1P35269 517 aaKnown RBP eCLIP14.88□□□□□ -0.03
TMEM116-202ENST00000437003 IPO4Q8TEX9 1081 aaKnown RBP14.88□□□□□ -0.03
TMEM116-202ENST00000437003 MX1P20591 662 aa14.87□□□□□ -0.03
TMEM116-202ENST00000437003 USHBP1Q8N6Y0 703 aa14.87□□□□□ -0.03
TMEM116-202ENST00000437003 SPC24Q8NBT2 197 aa14.87□□□□□ -0.03
TMEM116-202ENST00000437003 IL17REQ8NFR9 667 aa14.87□□□□□ -0.03
TMEM116-202ENST00000437003 IL1RAPL2Q9NP60 686 aa14.87□□□□□ -0.03
TMEM116-202ENST00000437003 LRRFIP2Q9Y608 721 aaKnown RBP14.87□□□□□ -0.03
TMEM116-202ENST00000437003 FAM184AQ8NB25 1140 aa14.86□□□□□ -0.03
TMEM116-202ENST00000437003 CNPY2Q9Y2B0 182 aa14.86□□□□□ -0.03
TMEM116-202ENST00000437003 RIOK3O14730 519 aaKnown RBP14.86□□□□□ -0.03
TMEM116-202ENST00000437003 DTNBO60941 627 aa14.86□□□□□ -0.03
TMEM116-202ENST00000437003 CUL4AQ13619 759 aa14.86□□□□□ -0.03
TMEM116-202ENST00000437003 GTPBP4Q9BZE4 634 aaKnown RBP14.86□□□□□ -0.03
TMEM116-202ENST00000437003 ANKARQ7Z5J8 1434 aa14.86□□□□□ -0.03
TMEM116-202ENST00000437003 GNAI3P08754 354 aa14.85□□□□□ -0.03
TMEM116-202ENST00000437003 TAF7Q15545 349 aaPredicted RBP14.85□□□□□ -0.03
TMEM116-202ENST00000437003 PYCARDQ9ULZ3 195 aa14.85□□□□□ -0.03
TMEM116-202ENST00000437003 MAP4K4O95819 1239 aaPredicted RBP14.85□□□□□ -0.03
TMEM116-202ENST00000437003 MAP3K5Q99683 1374 aa14.85□□□□□ -0.03
TMEM116-202ENST00000437003 MCM2P49736 904 aa14.85□□□□□ -0.03
TMEM116-202ENST00000437003 UVSSAQ2YD98 709 aa14.85□□□□□ -0.03
TMEM116-202ENST00000437003 CCDC183Q5T5S1 534 aa14.85□□□□□ -0.03
TMEM116-202ENST00000437003 LARP6Q9BRS8 491 aaKnown RBP14.85□□□□□ -0.03
TMEM116-202ENST00000437003 ESYT1Q9BSJ8 1104 aa14.85□□□□□ -0.03
TMEM116-202ENST00000437003 UNC5CLQ8IV45 518 aa14.84□□□□□ -0.03
TMEM116-202ENST00000437003 CNPY4Q8N129 248 aa14.84□□□□□ -0.03
TMEM116-202ENST00000437003 SRCIN1Q9C0H9 1055 aa14.84□□□□□ -0.03
TMEM116-202ENST00000437003 OSBPL3Q9H4L5 887 aa14.84□□□□□ -0.03
TMEM116-202ENST00000437003 SPTLC3Q9NUV7 552 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms