RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 PARP3Q9Y6F1 533 aa14.51□□□□□ -0.09
HMGCL-204ENST00000436439 DPEP1P16444 411 aa14.5□□□□□ -0.09
HMGCL-204ENST00000436439 DDR1Q08345 913 aa14.5□□□□□ -0.09
HMGCL-204ENST00000436439 BCS1LQ9Y276 419 aa14.5□□□□□ -0.09
HMGCL-204ENST00000436439 KCNA3P22001 575 aa14.49□□□□□ -0.09
HMGCL-204ENST00000436439 FAM9BQ8IZU0 186 aa14.49□□□□□ -0.09
HMGCL-204ENST00000436439 CFAP53Q96M91 514 aa14.49□□□□□ -0.09
HMGCL-204ENST00000436439 GPBP1L1Q9HC44 474 aaPredicted RBP14.49□□□□□ -0.09
HMGCL-204ENST00000436439 GTF3C3Q9Y5Q9 886 aa14.49□□□□□ -0.09
HMGCL-204ENST00000436439 CYP19A1P11511 503 aaPredicted RBP14.48□□□□□ -0.09
HMGCL-204ENST00000436439 NRXN2Q9P2S2 1712 aa14.48□□□□□ -0.09
HMGCL-204ENST00000436439 SOS1Q07889 1333 aaPredicted RBP14.48□□□□□ -0.09
HMGCL-204ENST00000436439 USPL1Q5W0Q7 1092 aa14.47□□□□□ -0.09
HMGCL-204ENST00000436439 ZBTB1Q9Y2K1 713 aa14.47□□□□□ -0.09
HMGCL-204ENST00000436439 POLRMTO00411 1230 aaKnown RBP14.47□□□□□ -0.09
HMGCL-204ENST00000436439 U2SURPO15042 1029 aaKnown RBP14.47□□□□□ -0.09
HMGCL-204ENST00000436439 TM4SF1P30408 202 aa14.47□□□□□ -0.09
HMGCL-204ENST00000436439 COL15A1P39059 1388 aa14.46□□□□□ -0.09
HMGCL-204ENST00000436439 DLEC1Q9Y238 1755 aa14.46□□□□□ -0.09
HMGCL-204ENST00000436439 SBF1O95248 1867 aa14.46□□□□□ -0.09
HMGCL-204ENST00000436439 FCHSD2O94868 740 aa14.46□□□□□ -0.1
HMGCL-204ENST00000436439 WDR43Q15061 677 aaKnown RBP eCLIP14.45□□□□□ -0.1
HMGCL-204ENST00000436439 ARHGAP27Q6ZUM4 889 aa14.45□□□□□ -0.1
HMGCL-204ENST00000436439 IL17REQ8NFR9 667 aa14.45□□□□□ -0.1
HMGCL-204ENST00000436439 KIF3CO14782 793 aa14.44□□□□□ -0.1
HMGCL-204ENST00000436439 ZPR1O75312 459 aa14.44□□□□□ -0.1
HMGCL-204ENST00000436439 CHRNA5P30532 468 aa14.44□□□□□ -0.1
HMGCL-204ENST00000436439 VSIG10Q8N0Z9 540 aa14.44□□□□□ -0.1
HMGCL-204ENST00000436439 BCL2L12Q9HB09 334 aa14.44□□□□□ -0.1
HMGCL-204ENST00000436439 ADAMTS8Q9UP79 889 aa14.44□□□□□ -0.1
HMGCL-204ENST00000436439 SCN7AQ01118 1682 aa14.43□□□□□ -0.1
HMGCL-204ENST00000436439 NARFQ9UHQ1 456 aa14.43□□□□□ -0.1
HMGCL-204ENST00000436439 ANKRD31Q8N7Z5 1873 aa14.42□□□□□ -0.1
HMGCL-204ENST00000436439 GNAT3A8MTJ3 354 aa14.42□□□□□ -0.1
HMGCL-204ENST00000436439 CANXP27824 592 aaKnown RBP14.42□□□□□ -0.1
HMGCL-204ENST00000436439 NFIXQ14938 502 aa14.42□□□□□ -0.1
HMGCL-204ENST00000436439 GAS2L2Q8NHY3 880 aa14.42□□□□□ -0.1
HMGCL-204ENST00000436439 ZNF496Q96IT1 587 aaPredicted RBP14.42□□□□□ -0.1
HMGCL-204ENST00000436439 PHACTR3Q96KR7 559 aa14.42□□□□□ -0.1
HMGCL-204ENST00000436439 PIM2Q9P1W9 311 aa14.42□□□□□ -0.1
HMGCL-204ENST00000436439 NUDCQ9Y266 331 aa14.42□□□□□ -0.1
HMGCL-204ENST00000436439 HEG1Q9ULI3 1381 aa14.41□□□□□ -0.1
HMGCL-204ENST00000436439 CEP350Q5VT06 3117 aa14.41□□□□□ -0.1
HMGCL-204ENST00000436439 TTC5Q8N0Z6 440 aa14.41□□□□□ -0.1
HMGCL-204ENST00000436439 RSPH6AQ9H0K4 717 aa14.41□□□□□ -0.1
HMGCL-204ENST00000436439 CCDC88AQ3V6T2 1871 aa14.41□□□□□ -0.1
HMGCL-204ENST00000436439 CEMIPQ8WUJ3 1361 aa14.4□□□□□ -0.1
HMGCL-204ENST00000436439 PRKAR2BP31323 418 aa14.4□□□□□ -0.1
HMGCL-204ENST00000436439 HNRNPUQ00839 825 aaKnown RBP eCLIP14.4□□□□□ -0.1
HMGCL-204ENST00000436439 TEFQ10587 303 aa14.4□□□□□ -0.1
HMGCL-204ENST00000436439 ZNF790Q6PG37 636 aa14.4□□□□□ -0.1
HMGCL-204ENST00000436439 BCORQ6W2J9 1755 aa14.4□□□□□ -0.1
HMGCL-204ENST00000436439 CARMIL3Q8ND23 1372 aa14.39□□□□□ -0.11
HMGCL-204ENST00000436439 ZBED9Q6R2W3 1325 aa14.39□□□□□ -0.11
HMGCL-204ENST00000436439 KCNQ3O43525 872 aa14.39□□□□□ -0.11
HMGCL-204ENST00000436439 EIF5P55010 431 aaKnown RBP14.39□□□□□ -0.11
HMGCL-204ENST00000436439 DALRD3Q5D0E6 543 aaKnown RBP14.39□□□□□ -0.11
HMGCL-204ENST00000436439 C9orf131Q5VYM1 1079 aa14.39□□□□□ -0.11
HMGCL-204ENST00000436439 COL11A2P13942 1736 aaPredicted RBP14.39□□□□□ -0.11
HMGCL-204ENST00000436439 DLG5Q8TDM6 1919 aa14.38□□□□□ -0.11
HMGCL-204ENST00000436439 CACNA1SQ13698 1873 aa14.38□□□□□ -0.11
HMGCL-204ENST00000436439 SERPINB2P05120 415 aa14.38□□□□□ -0.11
HMGCL-204ENST00000436439 HSPA6P17066 643 aa14.38□□□□□ -0.11
HMGCL-204ENST00000436439 STARD3NLO95772 234 aa14.37□□□□□ -0.11
HMGCL-204ENST00000436439 BICDL1Q6ZP65 573 aa14.37□□□□□ -0.11
HMGCL-204ENST00000436439 NMRK2Q9NPI5 230 aa14.37□□□□□ -0.11
HMGCL-204ENST00000436439 TBC1D9BQ66K14 1250 aa14.36□□□□□ -0.11
HMGCL-204ENST00000436439 NGEFQ8N5V2 710 aa14.36□□□□□ -0.11
HMGCL-204ENST00000436439 TIAM2Q8IVF5 1701 aa14.36□□□□□ -0.11
HMGCL-204ENST00000436439 A1BGP04217 495 aa14.35□□□□□ -0.11
HMGCL-204ENST00000436439 RASSF7Q02833 373 aa14.35□□□□□ -0.11
HMGCL-204ENST00000436439 NCBP3Q53F19 620 aaKnown RBP14.35□□□□□ -0.11
HMGCL-204ENST00000436439 FMNL2Q96PY5 1086 aa14.35□□□□□ -0.11
HMGCL-204ENST00000436439 PNNQ9H307 717 aaKnown RBP14.35□□□□□ -0.11
HMGCL-204ENST00000436439 RNF181Q9P0P0 153 aa14.35□□□□□ -0.11
HMGCL-204ENST00000436439 TBC1D2BQ9UPU7 963 aa14.35□□□□□ -0.11
HMGCL-204ENST00000436439 ZNF330Q9Y3S2 320 aaPredicted RBP14.35□□□□□ -0.11
HMGCL-204ENST00000436439 TNRC6CQ9HCJ0 1690 aaKnown RBP14.35□□□□□ -0.11
HMGCL-204ENST00000436439 PRAMEF22A3QJZ6 481 aa14.34□□□□□ -0.11
HMGCL-204ENST00000436439 BTBD11A6QL63 1104 aa14.34□□□□□ -0.11
HMGCL-204ENST00000436439 U2AF1L5P0DN76 240 aaPredicted RBP14.34□□□□□ -0.11
HMGCL-204ENST00000436439 PRELPP51888 382 aa14.34□□□□□ -0.11
HMGCL-204ENST00000436439 U2AF1Q01081 240 aaKnown RBP eCLIP14.34□□□□□ -0.11
HMGCL-204ENST00000436439 MCM10Q7L590 875 aa14.34□□□□□ -0.11
HMGCL-204ENST00000436439 RUNDC1Q96C34 613 aa14.34□□□□□ -0.11
HMGCL-204ENST00000436439 TEX13AQ9BXU3 409 aaPredicted RBP14.34□□□□□ -0.11
HMGCL-204ENST00000436439 A0A087WZG4 1122 aa14.34□□□□□ -0.11
HMGCL-204ENST00000436439 IL6STP40189 918 aaPredicted RBP14.34□□□□□ -0.11
HMGCL-204ENST00000436439 PIP4K2AP48426 406 aaPredicted RBP14.34□□□□□ -0.11
HMGCL-204ENST00000436439 DCTN1Q14203 1278 aa14.34□□□□□ -0.11
HMGCL-204ENST00000436439 CCDC24Q8N4L8 307 aa14.34□□□□□ -0.11
HMGCL-204ENST00000436439 USP16Q9Y5T5 823 aa14.34□□□□□ -0.11
HMGCL-204ENST00000436439 TOMM70O94826 608 aa14.33□□□□□ -0.12
HMGCL-204ENST00000436439 C2CD5Q86YS7 1000 aa14.33□□□□□ -0.12
HMGCL-204ENST00000436439 PLEKHF1Q96S99 279 aa14.33□□□□□ -0.12
HMGCL-204ENST00000436439 FER1L6Q2WGJ9 1857 aa14.33□□□□□ -0.12
HMGCL-204ENST00000436439 WDR90Q96KV7 1748 aa14.32□□□□□ -0.12
HMGCL-204ENST00000436439 LAMB4A4D0S4 1761 aa14.32□□□□□ -0.12
HMGCL-204ENST00000436439 ARFGEF2Q9Y6D5 1785 aa14.32□□□□□ -0.12
HMGCL-204ENST00000436439 CAMTA2O94983 1202 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms