RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 CCDC83Q8IWF9 413 aa12.95□□□□□ -0.34
SCN4A-201ENST00000435607 OGFOD1Q8N543 542 aa12.95□□□□□ -0.34
SCN4A-201ENST00000435607 RFC4P35249 363 aa12.95□□□□□ -0.34
SCN4A-201ENST00000435607 TCP11L1Q9NUJ3 509 aa12.95□□□□□ -0.34
SCN4A-201ENST00000435607 ZNF219Q9P2Y4 722 aaPredicted RBP12.95□□□□□ -0.34
SCN4A-201ENST00000435607 EXOC5O00471 708 aa12.95□□□□□ -0.34
SCN4A-201ENST00000435607 HMGB1P09429 215 aaKnown RBP12.95□□□□□ -0.34
SCN4A-201ENST00000435607 GSTO1P78417 241 aa12.95□□□□□ -0.34
SCN4A-201ENST00000435607 JAKMIP1Q96N16 626 aaKnown RBP12.95□□□□□ -0.34
SCN4A-201ENST00000435607 TEX13AQ9BXU3 409 aaPredicted RBP12.95□□□□□ -0.34
SCN4A-201ENST00000435607 AMOTQ4VCS5 1084 aa12.95□□□□□ -0.34
SCN4A-201ENST00000435607 PDE4BQ07343 736 aa12.95□□□□□ -0.34
SCN4A-201ENST00000435607 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.95□□□□□ -0.34
SCN4A-201ENST00000435607 NUP62CLQ9H1M0 184 aa12.95□□□□□ -0.34
SCN4A-201ENST00000435607 SHTN1A0MZ66 631 aa12.94□□□□□ -0.34
SCN4A-201ENST00000435607 C6orf163Q5TEZ5 329 aa12.94□□□□□ -0.34
SCN4A-201ENST00000435607 POLD1P28340 1107 aa12.94□□□□□ -0.34
SCN4A-201ENST00000435607 PPP1R14CQ8TAE6 165 aa12.94□□□□□ -0.34
SCN4A-201ENST00000435607 TTC12Q9H892 705 aaPredicted RBP12.94□□□□□ -0.34
SCN4A-201ENST00000435607 NOB1Q9ULX3 412 aaKnown RBP12.94□□□□□ -0.34
SCN4A-201ENST00000435607 NLRP5P59047 1200 aa12.94□□□□□ -0.34
SCN4A-201ENST00000435607 ZC3H6P61129 1189 aaKnown RBP12.94□□□□□ -0.34
SCN4A-201ENST00000435607 GIMAP7Q8NHV1 300 aa12.94□□□□□ -0.34
SCN4A-201ENST00000435607 SLC12A7Q9Y666 1083 aa12.94□□□□□ -0.34
SCN4A-201ENST00000435607 MYO15BQ96JP2 1530 aa12.94□□□□□ -0.34
SCN4A-201ENST00000435607 KIF5CO60282 957 aa12.94□□□□□ -0.34
SCN4A-201ENST00000435607 BBXQ8WY36 941 aaPredicted RBP12.94□□□□□ -0.34
SCN4A-201ENST00000435607 GAPVD1Q14C86 1478 aa12.94□□□□□ -0.34
SCN4A-201ENST00000435607 NDC80O14777 642 aa12.94□□□□□ -0.34
SCN4A-201ENST00000435607 RAB11FIP3O75154 756 aa12.94□□□□□ -0.34
SCN4A-201ENST00000435607 APBB1IPQ7Z5R6 666 aaPredicted RBP12.94□□□□□ -0.34
SCN4A-201ENST00000435607 FAM114A1Q8IWE2 563 aa12.94□□□□□ -0.34
SCN4A-201ENST00000435607 CCDC85AQ96PX6 553 aaPredicted RBP12.94□□□□□ -0.34
SCN4A-201ENST00000435607 BIN2Q9UBW5 565 aaPredicted RBP12.94□□□□□ -0.34
SCN4A-201ENST00000435607 ZSCAN12O43309 604 aa12.93□□□□□ -0.34
SCN4A-201ENST00000435607 TRAK2O60296 914 aa12.93□□□□□ -0.34
SCN4A-201ENST00000435607 KIF2AO00139 706 aaPredicted RBP12.93□□□□□ -0.34
SCN4A-201ENST00000435607 MAP4K4O95819 1239 aaPredicted RBP12.93□□□□□ -0.34
SCN4A-201ENST00000435607 CWC27Q6UX04 472 aaKnown RBP12.93□□□□□ -0.34
SCN4A-201ENST00000435607 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.93□□□□□ -0.34
SCN4A-201ENST00000435607 TRMT112Q9UI30 125 aaKnown RBP12.93□□□□□ -0.34
SCN4A-201ENST00000435607 V9GYY5 206 aaPredicted RBP12.93□□□□□ -0.34
SCN4A-201ENST00000435607 PRC1O43663 620 aa12.93□□□□□ -0.34
SCN4A-201ENST00000435607 PTCD1O75127 700 aaKnown RBP12.93□□□□□ -0.34
SCN4A-201ENST00000435607 CBX1P83916 185 aa12.93□□□□□ -0.34
SCN4A-201ENST00000435607 EXOSC9Q06265 439 aaKnown RBP12.93□□□□□ -0.34
SCN4A-201ENST00000435607 SSRP1Q08945 709 aaKnown RBP12.93□□□□□ -0.34
SCN4A-201ENST00000435607 IFI16Q16666 785 aaKnown RBP12.93□□□□□ -0.34
SCN4A-201ENST00000435607 CCDC14Q49A88 953 aa12.93□□□□□ -0.34
SCN4A-201ENST00000435607 TTF1Q15361 905 aaPredicted RBP12.92□□□□□ -0.34
SCN4A-201ENST00000435607 PPP1R42Q7Z4L9 355 aa12.92□□□□□ -0.34
SCN4A-201ENST00000435607 ERMNQ8TAM6 284 aa12.92□□□□□ -0.34
SCN4A-201ENST00000435607 PRPF31Q8WWY3 499 aaKnown RBP12.92□□□□□ -0.34
SCN4A-201ENST00000435607 PLEKHH2Q8IVE3 1493 aa12.92□□□□□ -0.34
SCN4A-201ENST00000435607 TDRD12Q587J7 1177 aaKnown RBP12.92□□□□□ -0.34
SCN4A-201ENST00000435607 SYNJ2O15056 1496 aa12.92□□□□□ -0.34
SCN4A-201ENST00000435607 TTC16Q8NEE8 873 aa12.92□□□□□ -0.34
SCN4A-201ENST00000435607 ALS2CR12Q96Q35 445 aa12.92□□□□□ -0.34
SCN4A-201ENST00000435607 NBPF8Q3BBV2 869 aa12.92□□□□□ -0.34
SCN4A-201ENST00000435607 NBPF14Q5TI25 921 aa12.92□□□□□ -0.34
SCN4A-201ENST00000435607 OTUD6BQ8N6M0 293 aa12.92□□□□□ -0.34
SCN4A-201ENST00000435607 TBC1D5Q92609 795 aa12.92□□□□□ -0.34
SCN4A-201ENST00000435607 ZBTB24O43167 697 aaPredicted RBP12.91□□□□□ -0.34
SCN4A-201ENST00000435607 BMS1Q14692 1282 aaKnown RBP12.91□□□□□ -0.34
SCN4A-201ENST00000435607 SPECC1Q5M775 1068 aa12.91□□□□□ -0.34
SCN4A-201ENST00000435607 MPRIPQ6WCQ1 1025 aa12.91□□□□□ -0.34
SCN4A-201ENST00000435607 ZNF213O14771 459 aa12.91□□□□□ -0.34
SCN4A-201ENST00000435607 SNX16P57768 344 aa12.91□□□□□ -0.34
SCN4A-201ENST00000435607 TMCO3Q6UWJ1 677 aa12.91□□□□□ -0.34
SCN4A-201ENST00000435607 KIF1BPQ96EK5 621 aa12.91□□□□□ -0.34
SCN4A-201ENST00000435607 ZGPATQ8N5A5 531 aaKnown RBP12.91□□□□□ -0.34
SCN4A-201ENST00000435607 C1orf115Q9H7X2 142 aa12.91□□□□□ -0.34
SCN4A-201ENST00000435607 ZNF428Q96B54 188 aa12.91□□□□□ -0.34
SCN4A-201ENST00000435607 ODF2LQ9ULJ1 636 aa12.91□□□□□ -0.34
SCN4A-201ENST00000435607 BRD4O60885 1362 aaPredicted RBP12.91□□□□□ -0.34
SCN4A-201ENST00000435607 SH3BP5O60239 455 aa12.91□□□□□ -0.34
SCN4A-201ENST00000435607 LMOD1P29536 600 aaPredicted RBP12.91□□□□□ -0.34
SCN4A-201ENST00000435607 TCERG1LQ5VWI1 586 aa12.91□□□□□ -0.34
SCN4A-201ENST00000435607 CCDC175P0C221 793 aa12.91□□□□□ -0.34
SCN4A-201ENST00000435607 PHACTR2O75167 634 aa12.9□□□□□ -0.34
SCN4A-201ENST00000435607 IMPG2Q9BZV3 1241 aa12.9□□□□□ -0.34
SCN4A-201ENST00000435607 CABP1Q9NZU7 370 aa12.9□□□□□ -0.34
SCN4A-201ENST00000435607 TBCAO75347 108 aaKnown RBP12.9□□□□□ -0.34
SCN4A-201ENST00000435607 BIRC2Q13490 618 aa12.9□□□□□ -0.34
SCN4A-201ENST00000435607 PDE3AQ14432 1141 aa12.9□□□□□ -0.34
SCN4A-201ENST00000435607 MICALCLQ6ZW33 695 aa12.9□□□□□ -0.34
SCN4A-201ENST00000435607 NOC2LQ9Y3T9 749 aaKnown RBP12.9□□□□□ -0.34
SCN4A-201ENST00000435607 ATAD2Q6PL18 1390 aa12.9□□□□□ -0.34
SCN4A-201ENST00000435607 PUS7Q96PZ0 661 aaKnown RBP12.9□□□□□ -0.34
SCN4A-201ENST00000435607 GLRX3O76003 335 aaKnown RBP12.9□□□□□ -0.34
SCN4A-201ENST00000435607 YEATS4O95619 227 aa12.9□□□□□ -0.34
SCN4A-201ENST00000435607 CCDC40Q4G0X9 1142 aa12.9□□□□□ -0.34
SCN4A-201ENST00000435607 CEP135Q66GS9 1140 aa12.9□□□□□ -0.34
SCN4A-201ENST00000435607 KAT14Q9H8E8 782 aa12.9□□□□□ -0.34
SCN4A-201ENST00000435607 ANKRD50Q9ULJ7 1429 aa12.9□□□□□ -0.34
SCN4A-201ENST00000435607 TOP2AP11388 1531 aaKnown RBP12.9□□□□□ -0.35
SCN4A-201ENST00000435607 KIAA1524Q8TCG1 905 aa12.9□□□□□ -0.35
SCN4A-201ENST00000435607 C8orf76Q96K31 380 aa12.9□□□□□ -0.35
SCN4A-201ENST00000435607 KLHL10Q6JEL2 608 aa12.89□□□□□ -0.35
SCN4A-201ENST00000435607 UBXN4Q92575 508 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms