RNA–Protein interactions for RNA: ENST00000435354.1

LINC01006-204, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-204ENST00000435354 COL15A1P39059 1388 aa19.28■□□□□ 0.68
LINC01006-204ENST00000435354 POLRMTO00411 1230 aaKnown RBP19.27■□□□□ 0.68
LINC01006-204ENST00000435354 ZPR1O75312 459 aa19.27■□□□□ 0.68
LINC01006-204ENST00000435354 TEFQ10587 303 aa19.27■□□□□ 0.68
LINC01006-204ENST00000435354 ZNF496Q96IT1 587 aaPredicted RBP19.27■□□□□ 0.68
LINC01006-204ENST00000435354 BCS1LQ9Y276 419 aa19.27■□□□□ 0.68
LINC01006-204ENST00000435354 ZNF790Q6PG37 636 aa19.26■□□□□ 0.67
LINC01006-204ENST00000435354 TTC5Q8N0Z6 440 aa19.26■□□□□ 0.67
LINC01006-204ENST00000435354 NARFQ9UHQ1 456 aa19.26■□□□□ 0.67
LINC01006-204ENST00000435354 AFDNP55196 1824 aaKnown RBP19.25■□□□□ 0.67
LINC01006-204ENST00000435354 BCL2L12Q9HB09 334 aa19.25■□□□□ 0.67
LINC01006-204ENST00000435354 NUDCQ9Y266 331 aa19.25■□□□□ 0.67
LINC01006-204ENST00000435354 ARFGEF1Q9Y6D6 1849 aa19.25■□□□□ 0.67
LINC01006-204ENST00000435354 HEG1Q9ULI3 1381 aa19.24■□□□□ 0.67
LINC01006-204ENST00000435354 U2AF1L5P0DN76 240 aaPredicted RBP19.24■□□□□ 0.67
LINC01006-204ENST00000435354 U2AF1Q01081 240 aaKnown RBP eCLIP19.24■□□□□ 0.67
LINC01006-204ENST00000435354 NRXN2Q9P2S2 1712 aa19.24■□□□□ 0.67
LINC01006-204ENST00000435354 SENP3-EIF4A1A0A087X0R7 540 aa19.23■□□□□ 0.67
LINC01006-204ENST00000435354 FCHSD2O94868 740 aa19.23■□□□□ 0.67
LINC01006-204ENST00000435354 STARD3NLO95772 234 aa19.23■□□□□ 0.67
LINC01006-204ENST00000435354 CANXP27824 592 aaKnown RBP19.23■□□□□ 0.67
LINC01006-204ENST00000435354 EIF5P55010 431 aaKnown RBP19.23■□□□□ 0.67
LINC01006-204ENST00000435354 NFIXQ14938 502 aa19.23■□□□□ 0.67
LINC01006-204ENST00000435354 ZNF526Q8TF50 670 aaPredicted RBP19.23■□□□□ 0.67
LINC01006-204ENST00000435354 GPBP1L1Q9HC44 474 aaPredicted RBP19.23■□□□□ 0.67
LINC01006-204ENST00000435354 KCNQ3O43525 872 aa19.22■□□□□ 0.67
LINC01006-204ENST00000435354 CHRNA5P30532 468 aa19.21■□□□□ 0.67
LINC01006-204ENST00000435354 PIM2Q9P1W9 311 aa19.21■□□□□ 0.67
LINC01006-204ENST00000435354 ARHGAP27Q6ZUM4 889 aa19.2■□□□□ 0.66
LINC01006-204ENST00000435354 FMNL2Q96PY5 1086 aa19.2■□□□□ 0.66
LINC01006-204ENST00000435354 SCN7AQ01118 1682 aa19.2■□□□□ 0.66
LINC01006-204ENST00000435354 BTBD11A6QL63 1104 aa19.19■□□□□ 0.66
LINC01006-204ENST00000435354 TEX13AQ9BXU3 409 aaPredicted RBP19.19■□□□□ 0.66
LINC01006-204ENST00000435354 DALRD3Q5D0E6 543 aaKnown RBP19.18■□□□□ 0.66
LINC01006-204ENST00000435354 MCM10Q7L590 875 aa19.18■□□□□ 0.66
LINC01006-204ENST00000435354 DLEC1Q9Y238 1755 aa19.17■□□□□ 0.66
LINC01006-204ENST00000435354 A0A087WZG4 1122 aa19.17■□□□□ 0.66
LINC01006-204ENST00000435354 A1BGP04217 495 aa19.17■□□□□ 0.66
LINC01006-204ENST00000435354 SERPINB2P05120 415 aa19.17■□□□□ 0.66
LINC01006-204ENST00000435354 CARMIL3Q8ND23 1372 aa19.17■□□□□ 0.66
LINC01006-204ENST00000435354 DCTN1Q14203 1278 aa19.16■□□□□ 0.66
LINC01006-204ENST00000435354 IL6STP40189 918 aaPredicted RBP19.15■□□□□ 0.66
LINC01006-204ENST00000435354 BICDL1Q6ZP65 573 aa19.15■□□□□ 0.66
LINC01006-204ENST00000435354 RTF1Q92541 710 aaKnown RBP19.15■□□□□ 0.66
LINC01006-204ENST00000435354 TBC1D2BQ9UPU7 963 aa19.15■□□□□ 0.66
LINC01006-204ENST00000435354 ZNF330Q9Y3S2 320 aaPredicted RBP19.15■□□□□ 0.66
LINC01006-204ENST00000435354 DLG5Q8TDM6 1919 aa19.15■□□□□ 0.66
LINC01006-204ENST00000435354 ANKRD31Q8N7Z5 1873 aa19.14■□□□□ 0.65
LINC01006-204ENST00000435354 PRAMEF22A3QJZ6 481 aa19.14■□□□□ 0.65
LINC01006-204ENST00000435354 KIF3CO14782 793 aa19.14■□□□□ 0.65
LINC01006-204ENST00000435354 TBC1D9BQ66K14 1250 aa19.14■□□□□ 0.65
LINC01006-204ENST00000435354 USP16Q9Y5T5 823 aa19.14■□□□□ 0.65
LINC01006-204ENST00000435354 SBF1O95248 1867 aa19.14■□□□□ 0.65
LINC01006-204ENST00000435354 HTATSF1O43719 755 aaKnown RBP19.13■□□□□ 0.65
LINC01006-204ENST00000435354 BCORQ6W2J9 1755 aa19.13■□□□□ 0.65
LINC01006-204ENST00000435354 CAMTA2O94983 1202 aa19.12■□□□□ 0.65
LINC01006-204ENST00000435354 PIP4K2AP48426 406 aaPredicted RBP19.12■□□□□ 0.65
LINC01006-204ENST00000435354 C9orf131Q5VYM1 1079 aa19.12■□□□□ 0.65
LINC01006-204ENST00000435354 PLEKHF1Q96S99 279 aa19.11■□□□□ 0.65
LINC01006-204ENST00000435354 SNRPA1P09661 255 aaKnown RBP19.1■□□□□ 0.65
LINC01006-204ENST00000435354 C2CD5Q86YS7 1000 aa19.1■□□□□ 0.65
LINC01006-204ENST00000435354 COL11A2P13942 1736 aaPredicted RBP19.1■□□□□ 0.65
LINC01006-204ENST00000435354 PRR5LQ6MZQ0 368 aa19.09■□□□□ 0.65
LINC01006-204ENST00000435354 CEP350Q5VT06 3117 aa19.09■□□□□ 0.65
LINC01006-204ENST00000435354 KDM3BQ7LBC6 1761 aa19.09■□□□□ 0.65
LINC01006-204ENST00000435354 NBPF26B4DH59 902 aa19.08■□□□□ 0.64
LINC01006-204ENST00000435354 TAF7Q15545 349 aaPredicted RBP19.08■□□□□ 0.64
LINC01006-204ENST00000435354 NBPF10Q6P3W6 841 aaKnown RBP19.08■□□□□ 0.64
LINC01006-204ENST00000435354 DZIP3Q86Y13 1208 aaKnown RBP19.08■□□□□ 0.64
LINC01006-204ENST00000435354 CCDC24Q8N4L8 307 aa19.08■□□□□ 0.64
LINC01006-204ENST00000435354 NBPF15Q8N660 670 aa19.08■□□□□ 0.64
LINC01006-204ENST00000435354 NMRK2Q9NPI5 230 aa19.08■□□□□ 0.64
LINC01006-204ENST00000435354 MIS18AQ9NYP9 233 aa19.08■□□□□ 0.64
LINC01006-204ENST00000435354 RNF181Q9P0P0 153 aa19.08■□□□□ 0.64
LINC01006-204ENST00000435354 TTLL6Q8N841 843 aa19.07■□□□□ 0.64
LINC01006-204ENST00000435354 LAMB4A4D0S4 1761 aa19.06■□□□□ 0.64
LINC01006-204ENST00000435354 H0YIN7 160 aa19.06■□□□□ 0.64
LINC01006-204ENST00000435354 PRELPP51888 382 aa19.06■□□□□ 0.64
LINC01006-204ENST00000435354 RASSF7Q02833 373 aa19.06■□□□□ 0.64
LINC01006-204ENST00000435354 NPM2Q86SE8 214 aaKnown RBP19.06■□□□□ 0.64
LINC01006-204ENST00000435354 SETDB2Q96T68 719 aa19.06■□□□□ 0.64
LINC01006-204ENST00000435354 BRIP1Q9BX63 1249 aa19.06■□□□□ 0.64
LINC01006-204ENST00000435354 HSPA6P17066 643 aa19.05■□□□□ 0.64
LINC01006-204ENST00000435354 NFE2L2Q16236 605 aa19.05■□□□□ 0.64
LINC01006-204ENST00000435354 NEFMP07197 916 aa19.04■□□□□ 0.64
LINC01006-204ENST00000435354 THUMPD2Q9BTF0 503 aaKnown RBP19.04■□□□□ 0.64
LINC01006-204ENST00000435354 CCDC88AQ3V6T2 1871 aa19.03■□□□□ 0.64
LINC01006-204ENST00000435354 PDE6BP35913 854 aa19.03■□□□□ 0.64
LINC01006-204ENST00000435354 CNBD1Q8NA66 436 aa19.03■□□□□ 0.64
LINC01006-204ENST00000435354 CLEC4GQ6UXB4 293 aa19.02■□□□□ 0.64
LINC01006-204ENST00000435354 NFKBIEO00221 500 aa19.01■□□□□ 0.63
LINC01006-204ENST00000435354 TOMM70O94826 608 aa19.01■□□□□ 0.63
LINC01006-204ENST00000435354 LMNB1P20700 586 aa19.01■□□□□ 0.63
LINC01006-204ENST00000435354 RALBP1Q15311 655 aa19.01■□□□□ 0.63
LINC01006-204ENST00000435354 PNISRQ8TF01 805 aaKnown RBP19.01■□□□□ 0.63
LINC01006-204ENST00000435354 ZNF622Q969S3 477 aaKnown RBP eCLIP19.01■□□□□ 0.63
LINC01006-204ENST00000435354 PDZRN3Q9UPQ7 1066 aa19.01■□□□□ 0.63
LINC01006-204ENST00000435354 SLX4Q8IY92 1834 aa19.01■□□□□ 0.63
LINC01006-204ENST00000435354 TIAM2Q8IVF5 1701 aa19■□□□□ 0.63
LINC01006-204ENST00000435354 RGL2O15211 777 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms